Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 4.6e-39 164.1 82 100.0
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 6.6e-38 160.2 81 98.8
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 2.5e-37 158.3 81 97.5
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 1.6e-36 155.6 81 96.3
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 5.8e-34 147.1 81 88.9
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 1.9e-32 142.1 81 86.4
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 5.4e-32 140.6 81 85.2
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 1.2e-31 139.4 80 85.0
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 3.5e-31 137.9 81 82.7
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 4.6e-31 137.5 81 81.5
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 6.0e-31 137.1 81 84.0
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 3.6e-28 127.9 81 81.5
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 3.6e-28 127.9 81 81.5
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 4.0e-27 124.4 70 87.1
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 4.0e-27 124.4 70 87.1
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 2.1e-23 112.1 80 66.2
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 3.5e-23 111.3 80 65.0
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 6.0e-23 110.5 81 64.2
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 7.9e-23 110.2 80 63.8
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 7.9e-23 110.2 80 63.8
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 7.9e-23 110.2 81 61.7
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 1.0e-22 109.8 81 63.0
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 1.0e-22 109.8 78 62.8
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 2.3e-22 108.6 79 63.3
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 3.9e-22 107.8 81 63.0
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 5.1e-22 107.5 80 61.2
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 5.1e-22 107.5 81 64.2
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 6.7e-22 107.1 78 62.8
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 1.5e-21 105.9 80 61.2
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 1.5e-21 105.9 78 64.1
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 2.5e-21 105.1 81 61.7
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 2.5e-21 105.1 81 64.2
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 3.3e-21 104.8 70 71.4
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 4.3e-21 104.4 79 60.8
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 5.6e-21 104.0 78 61.5
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 9.6e-21 103.2 76 64.5
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 1.3e-20 102.8 78 61.5
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.6e-20 102.4 78 60.3
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 1.6e-20 102.4 82 59.8
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 1.6e-20 102.4 78 57.7
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 2.8e-20 101.7 81 61.7
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 4.8e-20 100.9 73 67.1
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 6.2e-20 100.5 71 66.2
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 8.1e-20 100.1 82 58.5
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 8.1e-20 100.1 81 58.0
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 1.1e-19 99.8 74 60.8
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 2.4e-19 98.6 64 70.3
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 3.1e-19 98.2 81 56.8
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 3.1e-19 98.2 78 55.1
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 4.0e-19 97.8 77 55.8
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 5.3e-19 97.4 78 61.5
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 6.9e-19 97.1 79 55.7
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 6.9e-19 97.1 82 59.8
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 9.0e-19 96.7 77 54.5
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 9.0e-19 96.7 73 58.9
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 9.0e-19 96.7 79 54.4
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.2e-18 96.3 68 63.2
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.2e-18 96.3 78 55.1
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 1.2e-18 96.3 80 56.2
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 1.5e-18 95.9 78 60.3
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 1.5e-18 95.9 79 54.4
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 1.5e-18 95.9 74 59.5
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 1.5e-18 95.9 78 53.8
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 1.5e-18 95.9 78 53.8
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 2.0e-18 95.5 80 58.8
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 2.6e-18 95.1 72 63.9
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 2.6e-18 95.1 75 56.0
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 4.5e-18 94.4 78 53.8
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 4.5e-18 94.4 72 61.1
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 4.5e-18 94.4 73 56.2
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 5.8e-18 94.0 69 62.3
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 1.3e-17 92.8 72 59.7
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 2.2e-17 92.0 81 51.9
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 4.9e-17 90.9 82 56.1
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 6.5e-17 90.5 108 45.4
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 8.4e-17 90.1 75 54.7
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 1.4e-16 89.4 79 57.0
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 1.4e-16 89.4 73 56.2
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 3.2e-16 88.2 66 62.1
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 9.3e-16 86.7 65 64.6
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 9.3e-16 86.7 77 50.6
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 2.1e-15 85.5 65 63.1
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 4.6e-15 84.3 64 64.1
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 4.6e-15 84.3 64 59.4
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 6.0e-15 84.0 65 60.0
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.0e-14 83.2 84 52.4
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 3.0e-14 81.6 53 75.5
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 5.1e-14 80.9 53 69.8
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 5.1e-14 80.9 65 56.9
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 9.6e-13 76.6 67 56.7
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 9.6e-13 76.6 54 64.8
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 3.7e-12 74.7 55 67.3
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 4.8e-12 74.3 50 66.0
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 6.2e-12 73.9 61 55.7
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 1.8e-11 72.4 54 61.1
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.1e-11 71.6 61 52.5
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 4.0e-11 71.2 48 68.8
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 1.0e-09 66.6 46 58.7
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 7.1e-08 60.5 50 54.0
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 1.6e-07 59.3 56 46.4
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 1.6e-07 59.3 64 46.9


User provided reference genes

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