Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.3e-35 152.5 75 100.0
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.3e-35 152.5 75 100.0
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 3.7e-35 151.0 75 98.7
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 6.9e-34 146.7 74 94.6
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 6.9e-34 146.7 74 94.6
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 4.5e-33 144.1 75 92.0
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.3e-32 142.5 75 90.7
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 3.2e-31 137.9 75 88.0
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 5.5e-31 137.1 75 86.7
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 7.2e-31 136.7 75 84.0
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 9.4e-31 136.3 75 86.7
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 2.8e-27 124.8 71 80.3
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 8.2e-27 123.2 70 80.0
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.1e-26 122.9 64 90.6
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 1.1e-26 122.9 66 89.4
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.1e-26 122.9 69 84.1
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.1e-26 122.9 69 84.1
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.1e-26 122.9 69 84.1
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.4e-26 122.5 68 85.3
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.8e-26 122.1 71 80.3
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.8e-26 122.1 70 80.0
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 2.4e-26 121.7 68 80.9
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 3.1e-26 121.3 68 83.8
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 4.1e-26 120.9 68 83.8
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.1e-26 120.9 68 83.8
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.1e-26 120.9 68 83.8
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.1e-26 120.9 68 83.8
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 4.1e-26 120.9 68 83.8
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 7.0e-26 120.2 69 82.6
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 7.0e-26 120.2 68 83.8
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 7.0e-26 120.2 68 83.8
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 9.1e-26 119.8 68 82.4
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 9.1e-26 119.8 68 83.8
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 2.0e-25 118.6 68 79.4
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.6e-25 118.2 68 77.9
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.5e-25 117.9 68 80.9
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 4.5e-25 117.5 69 79.7
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.5e-25 117.5 68 79.4
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 5.9e-25 117.1 70 78.6
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 5.9e-25 117.1 69 79.7
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 7.7e-25 116.7 68 79.4
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 7.7e-25 116.7 69 79.7
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.0e-24 116.3 69 78.3
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.3e-24 115.9 68 77.9
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.7e-24 115.5 68 77.9
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 1.7e-24 115.5 73 71.2
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 2.2e-24 115.2 73 72.6
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 3.8e-24 114.4 68 76.5
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 5.0e-24 114.0 68 75.0
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 5.0e-24 114.0 68 79.4
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 5.0e-24 114.0 72 72.2
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 6.5e-24 113.6 68 77.9
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 6.5e-24 113.6 68 77.9
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 8.5e-24 113.2 68 77.9
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 8.5e-24 113.2 68 77.9
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 1.9e-23 112.1 65 76.9
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 1.9e-23 112.1 70 72.9
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 2.5e-23 111.7 68 75.0
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 2.5e-23 111.7 68 75.0
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 2.5e-23 111.7 68 75.0
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 3.2e-23 111.3 69 75.4
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 3.2e-23 111.3 68 76.5
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 4.2e-23 110.9 67 73.1
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 4.2e-23 110.9 73 68.5
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.2e-22 109.4 68 72.1
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.6e-22 109.0 63 79.4
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 2.1e-22 108.6 71 73.2
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.7e-22 108.2 68 72.1
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.7e-22 108.2 68 72.1
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.4e-21 105.9 71 70.4
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 1.4e-21 105.9 72 72.2
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.8e-21 105.5 65 75.4
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 2.3e-21 105.1 80 63.8
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 8.8e-21 103.2 71 70.4
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.1e-20 102.8 69 73.9
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 3.3e-20 101.3 75 73.3
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.3e-20 101.3 63 76.2
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 4.4e-20 100.9 69 71.0
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 7.4e-20 100.1 81 63.0
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 1.7e-19 99.0 71 63.4
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 8.2e-19 96.7 68 69.1
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 1.1e-18 96.3 49 91.8
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.1e-18 96.3 65 70.8
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.8e-18 95.5 82 59.8
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 4.1e-18 94.4 68 70.6
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 4.1e-18 94.4 65 69.2
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 4.5e-17 90.9 92 54.3
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.3e-16 89.4 51 84.3
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 5.0e-16 87.4 71 63.4
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 6.5e-16 87.0 68 64.7
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.1e-15 86.3 62 62.9
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.5e-15 85.1 133 39.8
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 2.5e-15 85.1 127 40.9
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 2.7e-14 81.6 49 77.6
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.3e-11 70.5 39 84.6
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 2.4e-10 68.6 39 82.1
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 5.3e-10 67.4 39 76.9
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 5.3e-10 67.4 35 88.6
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 9.1e-10 66.6 164 29.9
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.2e-09 66.2 57 61.4
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 1.2e-09 66.2 39 79.5
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 1.6e-09 65.9 39 79.5
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 1.0e-08 63.2 39 74.4
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 2.9e-08 61.6 40 72.5
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 2.9e-08 61.6 43 62.8
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 5.0e-08 60.8 34 79.4
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 5.0e-08 60.8 37 67.6
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.0e-08 60.8 36 77.8
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 1.9e-07 58.9 64 50.0
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 5.5e-07 57.4 35 80.0
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 7.2e-07 57.0 39 66.7
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 9.4e-07 56.6 40 60.0
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 9.4e-07 56.6 31 74.2


User provided reference genes

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