Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 2.1e-152 542.3 274 100.0
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 2.1e-152 542.3 274 100.0
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 5.0e-138 494.6 274 91.6
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 1.2e-136 490.0 274 90.9
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 3.0e-135 485.3 274 88.7
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.5e-134 483.0 275 88.7
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 6.3e-133 477.6 275 88.4
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 2.4e-132 475.7 274 86.9
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 2.6e-131 472.2 274 90.1
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 2.6e-131 472.2 274 90.1
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 8.2e-125 450.7 274 88.0
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.5e-113 412.5 279 78.1
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 2.2e-106 389.4 281 74.7
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 2.4e-100 369.4 280 68.6
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 1.0e-98 364.0 280 68.9
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 1.0e-98 364.0 279 68.5
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 6.5e-98 361.3 266 69.9
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 6.5e-98 361.3 278 68.0
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.5e-97 360.1 275 70.2
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.9e-97 359.8 274 69.7
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 2.5e-97 359.4 274 69.7
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 3.2e-97 359.0 281 67.6
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 3.2e-97 359.0 266 69.2
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 4.2e-97 358.6 228 75.4
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 7.2e-97 357.8 276 67.8
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 9.5e-97 357.5 281 68.0
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.1e-96 356.3 280 67.5
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 2.8e-96 355.9 278 68.0
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 3.6e-96 355.5 279 67.7
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 3.6e-96 355.5 283 66.1
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 4.7e-96 355.1 281 67.6
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 4.7e-96 355.1 226 75.2
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 6.1e-96 354.8 226 76.1
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 6.1e-96 354.8 280 67.5
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 8.0e-96 354.4 266 68.0
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 1.4e-95 353.6 278 67.6
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.0e-95 352.4 278 67.3
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 4.0e-95 352.1 279 65.6
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 5.2e-95 351.7 230 73.5
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 5.2e-95 351.7 290 65.9
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 5.2e-95 351.7 288 66.3
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 5.2e-95 351.7 270 67.8
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 6.8e-95 351.3 283 65.4
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 6.8e-95 351.3 277 66.4
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 6.8e-95 351.3 278 66.9
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 8.8e-95 350.9 278 66.5
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 2.0e-94 349.7 232 74.6
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.6e-94 349.4 277 67.1
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 2.6e-94 349.4 259 68.7
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 2.6e-94 349.4 287 66.2
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 4.4e-94 348.6 282 66.0
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 9.8e-94 347.4 276 67.4
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.3e-93 347.1 272 66.5
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.3e-93 347.1 265 68.3
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.7e-93 346.7 278 65.1
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.7e-93 346.7 275 65.5
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 2.2e-93 346.3 275 65.1
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 2.8e-93 345.9 248 71.8
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 3.7e-93 345.5 250 68.8
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 3.7e-93 345.5 230 73.5
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 4.9e-93 345.1 278 65.1
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 6.3e-93 344.7 224 73.7
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 6.3e-93 344.7 278 65.5
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 8.3e-93 344.4 280 65.7
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 8.3e-93 344.4 276 66.3
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 1.4e-92 343.6 295 62.4
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 1.8e-92 343.2 281 63.7
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 4.1e-92 342.0 280 64.6
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 5.4e-92 341.7 280 64.3
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 1.6e-91 340.1 282 64.2
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 2.7e-91 339.3 285 64.6
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 2.7e-91 339.3 204 79.4
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.5e-91 339.0 249 69.1
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 7.8e-91 337.8 280 64.3
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 1.0e-90 337.4 280 65.4
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.7e-90 336.7 213 77.0
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.7e-90 336.7 204 79.4
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 2.9e-90 335.9 204 78.4
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 3.8e-90 335.5 204 78.9
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 5.0e-90 335.1 232 74.6
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.9e-89 333.2 227 74.4
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 7.3e-89 331.3 262 67.9
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 3.6e-88 328.9 204 77.5
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 8.0e-88 327.8 204 76.5
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 2.3e-87 326.2 304 60.9
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 4.0e-87 325.5 270 63.3
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.2e-86 323.9 269 65.1
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 1.2e-86 323.9 203 75.9
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 4.4e-86 322.0 232 69.4
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 4.4e-86 322.0 215 74.4
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 3.7e-85 318.9 276 61.6
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.4e-84 316.2 275 61.8
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 2.7e-83 312.8 262 63.4
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 3.5e-83 312.4 264 62.9
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 4.6e-83 312.0 271 62.4
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.7e-82 310.1 246 65.4
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 5.6e-81 305.1 223 68.6
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 7.3e-81 304.7 216 70.8
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 7.5e-78 294.7 181 79.6
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 3.7e-77 292.4 250 59.6
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 1.4e-76 290.4 202 70.8
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 7.0e-76 288.1 223 67.3
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 9.9e-70 267.7 200 67.5
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.6e-66 254.6 278 55.4
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 7.3e-65 251.5 287 52.6
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 3.1e-63 246.1 159 76.1
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 8.9e-63 244.6 286 48.6
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 4.4e-62 242.3 158 77.2
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 1.3e-61 240.7 163 72.4
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.7e-61 240.4 222 58.1
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 1.4e-60 237.3 203 59.6
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 6.0e-59 231.9 218 57.8
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.3e-58 229.9 225 57.3
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 7.6e-54 214.9 232 48.7
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 4.9e-53 212.2 262 45.8
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 6.0e-51 205.3 116 82.8
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 3.9e-42 176.0 111 76.6
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 2.8e-40 169.9 173 56.1
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 6.9e-39 165.2 202 48.0
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.1e-23 114.8 187 39.6
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.8e-23 114.0 74 68.9
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 5.7e-09 65.9 62 58.1
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.3e-08 64.7 34 85.3


User provided reference genes

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