Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p36570 Brassica napus HOM05D002825 ORTHO05D003824 1.5e-146 522.7 244 100.0
BolC8t51240H Brassica oleracea HOM05D002825 ORTHO05D003824 1.5e-146 522.7 244 100.0
AL5G43650 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 1.2e-71 273.9 270 56.3
AL5G44790 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 3.3e-69 265.8 267 55.4
AT3G60980 Arabidopsis thaliana HOM05D002825 ORTHO05D003824 2.8e-68 262.7 268 53.0
AL5G43690 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 1.4e-67 260.4 264 53.4
AL5G43830 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 3.1e-67 259.2 278 53.2
BcaC08g45154 Brassica carinata HOM05D002825 ORTHO05D003824 6.5e-65 251.5 263 54.4
BolC6t37944H Brassica oleracea HOM05D002825 ORTHO05D003824 6.5e-65 251.5 263 54.4
C06p27760 Brassica napus HOM05D002825 ORTHO05D003824 2.5e-64 249.6 263 54.4
AL5G29610 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 9.1e-59 231.1 270 51.9
C09p31390 Brassica napus HOM05D002825 ORTHO05D003824 1.2e-55 220.7 250 51.2
BcaC05g24908 Brassica carinata HOM05D002825 ORTHO05D003824 7.3e-32 141.7 236 35.2
Carub.0007s2495 Capsella rubella HOM05D002825 ORTHO05D003824 2.3e-30 136.7 257 35.0
Carub.0005s2723 Capsella rubella HOM05D002825 ORTHO05D023647 4.0e-30 136.0 270 34.1
Carub.0004s2842 Capsella rubella HOM05D002825 ORTHO05D011549 8.9e-30 134.8 264 32.6
BolC9t55997H Brassica oleracea HOM05D002825 ORTHO05D003824 2.0e-29 133.7 122 57.4
FAN04G1220 Fragaria x ananassa HOM05D002825 ORTHO05D003824 7.5e-29 131.7 254 33.5
FAN18G3010 Fragaria x ananassa HOM05D002825 ORTHO05D003824 7.5e-29 131.7 254 33.5
Thhalv10006738m.g Eutrema salsugineum HOM05D002825 ORTHO05D003824 9.8e-29 131.3 162 43.2
AL4G44550 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 1.7e-28 130.6 256 34.0
Carub.0201s0001 Capsella rubella HOM05D002825 ORTHO05D003824 2.2e-28 130.2 280 35.4
Potri.004G227800 Populus trichocarpa HOM05D002825 ORTHO05D003824 3.7e-28 129.4 258 32.2
FAN08G2274 Fragaria x ananassa HOM05D002825 ORTHO05D003824 1.9e-27 127.1 254 32.7
Thhalv10023497m.g Eutrema salsugineum HOM05D002825 ORTHO05D003824 5.4e-27 125.6 257 32.3
C01p48580 Brassica napus HOM05D002825 ORTHO05D003824 7.0e-27 125.2 249 32.5
FvH4_5g27880 Fragaria vesca HOM05D002825 ORTHO05D003824 1.6e-26 124.0 254 32.3
BcaC06g33535 Brassica carinata HOM05D002825 ORTHO05D003824 2.7e-26 123.2 253 32.0
Lsat_1_v5_gn_7_77221 Lactuca sativa HOM05D002825 ORTHO05D003824 2.7e-26 123.2 255 32.9
RcHm_v2.0_Chr3g0472581 Rosa chinensis HOM05D002825 ORTHO05D003824 7.8e-26 121.7 254 33.1
BcaC01g05126 Brassica carinata HOM05D002825 ORTHO05D003824 2.3e-25 120.2 269 30.9
C07p48550 Brassica napus HOM05D002825 ORTHO05D003824 3.9e-25 119.4 252 31.0
AL1G60310 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 8.6e-25 118.2 261 31.4
Medtr7g069270 Medicago truncatula HOM05D002825 ORTHO05D003824 1.1e-24 117.9 258 29.5
A03p25220 Brassica napus HOM05D002825 ORTHO05D003824 1.5e-24 117.5 234 32.9
AL5G42790 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 4.3e-24 115.9 235 31.5
BraA03t11722Z Brassica rapa HOM05D002825 ORTHO05D003824 5.6e-24 115.5 246 32.1
AL3G34220 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 4.7e-23 112.5 247 32.4
AL3G34230 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 4.7e-23 112.5 247 32.4
BcaB01g03268 Brassica carinata HOM05D002825 ORTHO05D003824 6.2e-23 112.1 253 29.2
BcaC01g05136 Brassica carinata HOM05D002825 ORTHO05D003824 6.2e-23 112.1 247 30.8
BolC3t15358H Brassica oleracea HOM05D002825 ORTHO05D003824 6.2e-23 112.1 247 30.8
Sabra01G0172800 Salix brachista HOM05D002825 ORTHO05D003824 6.2e-23 112.1 258 29.1
Lsat_1_v5_gn_5_91740 Lactuca sativa HOM05D002825 ORTHO05D003824 8.0e-23 111.7 254 29.9
PGR142G0082 Punica granatum HOM05D002825 ORTHO05D003824 8.0e-23 111.7 255 29.4
C03p30090 Brassica napus HOM05D002825 ORTHO05D003824 1.1e-22 111.3 247 31.2
Carub.0005s2724 Capsella rubella HOM05D002825 ORTHO05D003824 1.1e-22 111.3 263 31.2
ECA236G4782 Erigeron canadensis HOM05D002825 ORTHO05D003824 1.1e-22 111.3 255 31.0
Thhalv10023949m.g Eutrema salsugineum HOM05D002825 ORTHO05D003824 1.8e-22 110.5 246 30.1
CARHR140100 Cardamine hirsuta HOM05D002825 ORTHO05D003824 1.5e-21 107.5 248 30.6
Potri.003G002950 Populus trichocarpa HOM05D002825 ORTHO05D003824 2.2e-20 103.6 163 37.4
AT5G28340 Arabidopsis thaliana HOM05D002825 ORTHO05D011549 6.4e-20 102.1 206 31.6
AT5G28380 Arabidopsis thaliana HOM05D002825 ORTHO05D011549 6.4e-20 102.1 206 31.6
BolC1t04813H Brassica oleracea HOM05D002825 ORTHO05D003824 1.4e-19 100.9 249 29.7
HanXRQChr08g0228491 Helianthus annuus HOM05D002825 ORTHO05D003824 5.4e-19 99.0 242 28.1
AL7G38410 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 7.0e-19 98.6 273 27.1
BcaC04g21472 Brassica carinata HOM05D002825 ORTHO05D003824 7.0e-19 98.6 101 51.5
RcHm_v2.0_Chr7g0220071 Rosa chinensis HOM05D002825 ORTHO05D003824 7.0e-19 98.6 241 29.0
BcaNung04658 Brassica carinata HOM05D002825 ORTHO05D003824 1.6e-18 97.4 208 32.2
CARHR170890 Cardamine hirsuta HOM05D002825 ORTHO05D003824 2.7e-18 96.7 152 34.9
Medtr7g069230 Medicago truncatula HOM05D002825 ORTHO05D003824 7.8e-18 95.1 237 27.8
BcaB02g09551 Brassica carinata HOM05D002825 ORTHO05D011549 3.0e-17 93.2 243 28.0
BcaC02g12824 Brassica carinata HOM05D002825 ORTHO05D011549 3.0e-17 93.2 257 27.2
Glyma.16G001000 Glycine max HOM05D002825 ORTHO05D003824 3.9e-17 92.8 164 34.1
Aqoxy6G00055 Aquilegia oxysepala HOM05D002825 ORTHO05D003824 6.6e-17 92.0 158 34.2
A05p00840 Brassica napus HOM05D002825 ORTHO05D011549 6.6e-17 92.0 263 25.9
BraA05t19087Z Brassica rapa HOM05D002825 ORTHO05D011549 6.6e-17 92.0 263 25.9
Carub.0005s2842 Capsella rubella HOM05D002825 ORTHO05D011549 6.6e-17 92.0 214 28.0
BolC7t45363H Brassica oleracea HOM05D002825 ORTHO05D003824 1.1e-16 91.3 246 27.6
Medtr8g102650 Medicago truncatula HOM05D002825 ORTHO05D003824 1.9e-16 90.5 254 26.4
Medtr7g069290 Medicago truncatula HOM05D002825 ORTHO05D003824 3.3e-16 89.7 162 30.9
Lalb_Chr18g0061131 Lupinus albus HOM05D002825 ORTHO05D003824 5.6e-16 89.0 254 24.8
C01p48210 Brassica napus HOM05D002825 ORTHO05D003824 1.6e-15 87.4 194 33.5
GSVIVG01023159001 Vitis vinifera HOM05D002825 ORTHO05D003824 2.1e-15 87.0 162 32.7
Carub.0201s0002 Capsella rubella HOM05D002825 ORTHO05D011549 2.8e-15 86.7 232 27.6
DCAR_022278 Daucus carota HOM05D002825 ORTHO05D003824 2.8e-15 86.7 235 26.4
Aqoxy3G01338 Aquilegia oxysepala HOM05D002825 ORTHO05D003824 6.2e-15 85.5 169 33.7
BcaC08g45156 Brassica carinata HOM05D002825 ORTHO05D021407 8.1e-15 85.1 194 30.9
Gohir.A05G405100 Gossypium hirsutum HOM05D002825 ORTHO05D003824 8.1e-15 85.1 162 33.3
Gohir.D04G010500 Gossypium hirsutum HOM05D002825 ORTHO05D003824 8.1e-15 85.1 162 33.3
C04p01000 Brassica napus HOM05D013471 ORTHO05D015349 1.1e-14 84.7 251 26.3
BcaC01g05137 Brassica carinata HOM05D002825 ORTHO05D003824 1.8e-14 84.0 104 42.3
BolC3t15357H Brassica oleracea HOM05D002825 ORTHO05D003824 1.8e-14 84.0 104 42.3
Carub.0004s2841 Capsella rubella HOM05D002825 ORTHO05D003824 1.8e-14 84.0 272 27.2
AL4G44540 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 3.1e-14 83.2 104 42.3
Ca_17359_v3 Cicer arietinum L. HOM05D002825 ORTHO05D003824 4.0e-14 82.8 105 38.1
C04p01010 Brassica napus HOM05D002825 ORTHO05D011549 5.2e-14 82.4 246 26.8
C03p30080 Brassica napus HOM05D002825 ORTHO05D003824 1.2e-13 81.3 104 41.3
AL5G42780 Arabidopsis lyrata HOM05D002825 ORTHO05D023647 2.0e-13 80.5 166 32.5
BcaC02g12622 Brassica carinata HOM05D002825 ORTHO05D011549 2.6e-13 80.1 254 28.0
Nitab4.5_0001057g0030 Nicotiana tabacum HOM05D002825 ORTHO05D003824 2.6e-13 80.1 99 39.4
CARHR170900 Cardamine hirsuta HOM05D002825 ORTHO05D023647 3.4e-13 79.7 163 32.5
Actinidia01627 Actinidia chinensis HOM05D002825 ORTHO05D003824 5.8e-13 79.0 103 38.8
Carub.0006s2575 Capsella rubella HOM05D002825 ORTHO05D011549 7.5e-13 78.6 265 24.9
Nitab4.5_0001129g0060 Nicotiana tabacum HOM05D002825 ORTHO05D003824 7.5e-13 78.6 99 38.4
Aqoxy6G01599 Aquilegia oxysepala HOM05D002825 ORTHO05D003824 9.9e-13 78.2 259 25.9
Rhsim05G0174700 Rhododendron simsii HOM05D002825 ORTHO05D003824 9.9e-13 78.2 103 38.8
AT3G60960 Arabidopsis thaliana HOM05D002825 ORTHO05D011549 1.3e-12 77.8 137 35.8
BolC4t21754H Brassica oleracea HOM05D002825 ORTHO05D011549 1.3e-12 77.8 254 27.6
BcaC02g12825 Brassica carinata HOM05D013471 ORTHO05D015349 1.7e-12 77.4 249 24.1
AL5G43820 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 4.9e-12 75.9 122 35.2
Carub.0004s2572 Capsella rubella HOM05D002825 ORTHO05D003824 8.3e-12 75.1 106 40.6
Aa31LG1G4670 Aethionema arabicum HOM05D002825 ORTHO05D003824 1.1e-11 74.7 71 47.9
BraA05t19086Z Brassica rapa HOM05D013471 ORTHO05D015349 1.4e-11 74.3 249 24.9
AL5G43680 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 3.2e-11 73.2 137 33.6
BcaB08g37339 Brassica carinata HOM05D002825 ORTHO05D003824 3.2e-11 73.2 87 40.2
AL1G21000 Arabidopsis lyrata HOM05D002825 ORTHO05D003824 7.1e-11 72.0 71 47.9
BcaC07g38540 Brassica carinata HOM05D002825 ORTHO05D003824 2.1e-10 70.5 90 41.1
C08p13530 Brassica napus HOM05D002825 ORTHO05D003824 2.1e-10 70.5 90 41.1
BolC8t48989H Brassica oleracea HOM05D002825 ORTHO05D003824 2.1e-10 70.5 90 41.1
BcaB02g09550 Brassica carinata HOM05D013471 ORTHO05D015349 2.7e-10 70.1 196 26.0
BcaC02g12596 Brassica carinata HOM05D013471 ORTHO05D015349 2.7e-10 70.1 197 26.4
BolC4t21715H Brassica oleracea HOM05D013471 ORTHO05D015349 2.7e-10 70.1 197 26.4
Carub.0001s0966 Capsella rubella HOM05D002825 ORTHO05D003824 2.7e-10 70.1 71 46.5
Glyma.12G164700 Glycine max HOM05D002825 ORTHO05D003824 2.7e-10 70.1 105 33.3
C06p27800 Brassica napus HOM05D000647 ORTHO05D011549 3.5e-10 69.7 116 33.6
BolC6t37947H Brassica oleracea HOM05D000647 ORTHO05D011549 3.5e-10 69.7 116 33.6
A09p65140 Brassica napus HOM05D002825 ORTHO05D003824 4.6e-10 69.3 67 46.3
C05p08380 Brassica napus HOM05D002825 ORTHO05D003824 4.6e-10 69.3 71 43.7
BolC5t29589H Brassica oleracea HOM05D002825 ORTHO05D003824 4.6e-10 69.3 71 43.7
BraA09t41857Z Brassica rapa HOM05D002825 ORTHO05D003824 4.6e-10 69.3 67 46.3
Cpa.g.sc113.4 Carica papaya HOM05D002825 ORTHO05D003824 4.6e-10 69.3 71 46.5
Haze_10006 Corylus avellana HOM05D002825 ORTHO05D003824 4.6e-10 69.3 94 40.4
BcaC07g41827 Brassica carinata HOM05D002825 ORTHO05D003824 6.0e-10 68.9 67 46.3
CARHR010370 Cardamine hirsuta HOM05D002825 ORTHO05D003824 7.8e-10 68.6 71 46.5
A05p00830 Brassica napus HOM05D013471 ORTHO05D015349 1.0e-09 68.2 251 23.9
A08p34080 Brassica napus HOM05D002825 ORTHO05D003824 1.0e-09 68.2 74 44.6
BraA08t35321Z Brassica rapa HOM05D002825 ORTHO05D003824 1.0e-09 68.2 74 44.6
A06p06900 Brassica napus HOM05D002825 ORTHO05D003824 1.3e-09 67.8 71 43.7
BraA06t23906Z Brassica rapa HOM05D002825 ORTHO05D003824 1.3e-09 67.8 71 43.7
C08p49080 Brassica napus HOM05D002825 ORTHO05D003824 1.7e-09 67.4 67 44.8
AL5G44690 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 3.0e-09 66.6 118 33.1
Medtr7g069300 Medicago truncatula HOM05D002825 ORTHO05D003824 6.6e-09 65.5 166 27.7
Cfa004457 Carpinus fangiana HOM05D002825 ORTHO05D003824 1.1e-08 64.7 73 43.8
Dinv29621 Davidia involucrata HOM05D002825 ORTHO05D003824 1.1e-08 64.7 71 43.7
Dinv29670 Davidia involucrata HOM05D002825 ORTHO05D003824 1.5e-08 64.3 227 26.0
CAN.G855.39 Capsicum annuum HOM05D002825 ORTHO05D003824 1.9e-08 63.9 235 22.6
Sed0018539 Sechium edule HOM05D002825 ORTHO05D003824 1.9e-08 63.9 67 43.3
BcaC01g05127 Brassica carinata HOM05D002825 ORTHO05D003824 5.6e-08 62.4 157 29.9
MELO3C021840.2 Cucumis melo HOM05D002825 ORTHO05D003824 5.6e-08 62.4 67 41.8
CSS0030972 Camellia sinensis var. sinensis HOM05D002825 ORTHO05D003824 7.3e-08 62.0 65 44.6
ECA236G2567 Erigeron canadensis HOM05D002825 ORTHO05D003824 7.3e-08 62.0 163 27.0
Lj4g0012938 Lotus japonicus HOM05D002825 ORTHO05D003824 1.2e-07 61.2 147 32.7
CsaV3_2G036260 Cucumis sativus L. HOM05D002825 ORTHO05D003824 1.6e-07 60.8 67 41.8
Manes.07G028200 Manihot esculenta HOM05D002825 ORTHO05D003824 1.6e-07 60.8 73 42.5
MD08G1246600 Malus domestica HOM05D002825 ORTHO05D003824 2.1e-07 60.5 128 29.7
AL5G44780 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 3.6e-07 59.7 118 29.7
Carub.0005s2841 Capsella rubella HOM05D002825 ORTHO05D003824 4.7e-07 59.3 63 50.8
Solyc01g103160.3 Solanum lycopersicum HOM05D002825 ORTHO05D003824 4.7e-07 59.3 67 38.8
Sopen01g045570 Solanum pennellii HOM05D002825 ORTHO05D003824 4.7e-07 59.3 67 38.8
PGSC0003DMG400024905 Solanum tuberosum HOM05D002825 ORTHO05D003824 1.4e-06 57.8 67 37.3
Oeu002155.1 Olea europaea HOM05D002825 ORTHO05D003824 1.8e-06 57.4 67 37.3
Peaxi162Scf00011g01628 Petunia axillaris HOM05D002825 ORTHO05D003824 1.8e-06 57.4 67 37.3
Actinidia26189 Actinidia chinensis HOM05D000331 ORTHO05D003399 3.1e-06 56.6 71 39.4
A05p25940 Brassica napus HOM05D002825 ORTHO05D011549 3.1e-06 56.6 238 23.5
BraA01t03859Z Brassica rapa HOM05D002825 ORTHO05D003824 3.1e-06 56.6 108 34.3
Carub.0006s2574 Capsella rubella HOM05D002825 ORTHO05D003824 5.2e-06 55.8 103 35.0


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