Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 4.6e-64 247.7 120 100.0
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 4.6e-64 247.7 120 100.0
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 4.6e-64 247.7 120 100.0
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 4.6e-64 247.7 120 100.0
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 4.6e-64 247.7 120 100.0
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 3.9e-63 244.6 120 98.3
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 3.9e-63 244.6 120 98.3
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 3.9e-63 244.6 120 98.3
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 3.9e-63 244.6 120 98.3
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 3.9e-63 244.6 120 98.3
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 3.9e-63 244.6 120 98.3
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 5.1e-63 244.2 120 98.3
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 1.9e-62 242.3 120 96.7
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 4.3e-62 241.1 120 96.7
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 5.6e-62 240.7 120 96.7
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 5.6e-62 240.7 120 96.7
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 7.4e-62 240.4 120 95.8
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 1.3e-61 239.6 120 95.8
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 6.9e-60 233.8 120 94.2
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 6.0e-56 220.7 120 85.0
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 1.8e-55 219.2 120 85.8
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 2.3e-55 218.8 120 85.8
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 5.1e-55 217.6 120 84.2
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 1.5e-54 216.1 120 85.0
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 83.3
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 83.3
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 82.5
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 84.2
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 84.2
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 84.2
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 1.9e-54 215.7 120 83.3
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 2.5e-54 215.3 119 83.2
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.5e-54 215.3 120 83.3
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.5e-54 215.3 120 83.3
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 2.5e-54 215.3 120 82.5
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 4.3e-54 214.5 120 82.5
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 4.3e-54 214.5 120 83.3
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.7e-54 214.2 120 83.3
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 5.7e-54 214.2 120 82.5
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 7.4e-54 213.8 120 81.7
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 7.4e-54 213.8 120 83.3
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 7.4e-54 213.8 120 83.3
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 9.7e-54 213.4 120 81.7
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 9.7e-54 213.4 120 81.7
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.7e-54 213.4 120 83.3
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 9.7e-54 213.4 119 85.7
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 1.3e-53 213.0 120 82.5
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 83.3
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 1.6e-53 212.6 120 82.5
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 2.2e-53 212.2 120 81.7
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 2.8e-53 211.8 120 80.0
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 3.7e-53 211.5 120 81.7
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 4.8e-53 211.1 120 80.8
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 4.8e-53 211.1 120 80.0
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 81.7
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 80.8
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 8.2e-53 210.3 119 81.5
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 82.5
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 82.5
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 84.2
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 80.8
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 80.0
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 83.3
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 79.2
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 80.0
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 80.8
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 81.7
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 80.8
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 83.3
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 83.3
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 79.2
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 80.0
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 79.2
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 81.7
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 5.3e-52 207.6 119 79.8
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 6.9e-52 207.2 120 78.3
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 6.9e-52 207.2 120 82.5
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 6.9e-52 207.2 111 85.6
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 9.0e-52 206.8 120 80.0
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 9.0e-52 206.8 120 78.3
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 9.0e-52 206.8 120 80.8
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 80.8
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 82.5
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 81.7
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 81.7
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 1.5e-51 206.1 120 80.8
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 1.5e-51 206.1 120 80.0
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 2.0e-51 205.7 120 79.2
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 2.0e-51 205.7 119 81.5
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 78.3
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 4.5e-51 204.5 119 79.0
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 4.5e-51 204.5 118 80.5
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 5.9e-51 204.1 120 79.2
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 5.9e-51 204.1 120 80.8
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 7.7e-51 203.8 119 78.2
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 7.7e-51 203.8 120 77.5
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 1.3e-50 203.0 120 76.7
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 1.3e-50 203.0 120 79.2
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 1.3e-50 203.0 120 80.0
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 1.3e-50 203.0 120 80.8
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 2.9e-50 201.8 115 82.6
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 2.9e-50 201.8 120 80.0
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 2.9e-50 201.8 120 75.8
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 2.9e-50 201.8 120 76.7
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 3.8e-50 201.4 119 77.3
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 3.8e-50 201.4 120 75.8
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 5.0e-50 201.1 120 77.5
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 5.0e-50 201.1 119 77.3
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 5.0e-50 201.1 119 77.3
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 1.9e-49 199.1 120 80.0
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 3.2e-49 198.4 119 75.6
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 3.2e-49 198.4 144 69.4
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 9.4e-49 196.8 117 78.6
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 9.4e-49 196.8 120 76.7
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 2.1e-48 195.7 111 80.2
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 8.8e-47 190.3 110 80.0
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 5.7e-46 187.6 110 77.3
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.3e-45 186.4 110 78.2
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 2.8e-45 185.3 110 85.5
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 2.8e-45 185.3 110 85.5
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 6.3e-45 184.1 110 80.9
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 1.1e-44 183.3 111 77.5
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 1.4e-44 183.0 112 80.4
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 1.4e-44 183.0 110 78.2
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 2.4e-44 182.2 110 84.5
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 1.4e-41 172.9 131 64.9
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 7.2e-41 170.6 107 75.7
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 1.2e-40 169.9 124 68.5
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.3e-39 165.6 95 83.2
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 3.0e-39 165.2 213 43.7
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 3.0e-39 165.2 120 62.5
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 6.7e-39 164.1 120 66.7
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 4.4e-38 161.4 84 91.7
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.1e-36 156.8 93 80.6
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.4e-36 156.4 91 81.3
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 1.8e-36 156.0 91 80.2
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 1.8e-36 156.0 95 76.8
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 3.1e-36 155.2 120 60.8
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 5.3e-36 154.5 93 78.5
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.1e-36 153.7 91 80.2
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 1.2e-35 153.3 94 78.7
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 1.5e-35 152.9 120 63.3
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 2.0e-35 152.5 136 62.5
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 3.5e-35 151.8 133 56.4
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.5e-35 151.4 91 80.2
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.2e-34 149.1 91 76.9
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 2.2e-34 149.1 169 50.3
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 2.2e-34 149.1 91 78.0
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 1.9e-33 146.0 86 76.7
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 5.5e-33 144.4 89 76.4
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 2.7e-32 142.1 91 74.7
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 1.0e-31 140.2 86 70.9
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 1.4e-31 139.8 91 73.6
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 1.5e-30 136.3 94 69.1
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.7e-29 132.9 77 80.5
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 7.0e-28 127.5 95 66.3
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 3.2e-25 118.6 62 87.1
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 4.2e-25 118.2 62 87.1
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 7.2e-25 117.5 118 44.9
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 1.2e-24 116.7 62 85.5
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 2.1e-24 115.9 62 83.9
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 4.0e-23 111.7 91 64.8
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.6e-22 109.0 120 50.0
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 7.5e-22 107.5 108 47.2
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 5.9e-19 97.8 57 77.2
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.5e-17 93.2 61 70.5
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 3.2e-17 92.0 82 61.0
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 7.2e-17 90.9 61 68.9
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 9.4e-17 90.5 115 39.1
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.0e-14 82.8 57 68.4
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 7.2e-09 64.3 44 70.5
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 2.6e-06 55.8 35 71.4


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