Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-79 299.7 137 100.0
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-77 292.7 137 98.5
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-47 193.4 134 64.9
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-46 189.9 134 64.2
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 1.1e-42 176.8 81 98.8
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-39 166.4 87 90.8
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 8.0e-28 127.5 75 73.3
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 3.9e-27 125.2 133 42.9
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 3.9e-27 125.2 133 42.9
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 4.4e-26 121.7 133 43.6
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 2.2e-25 119.4 75 66.7
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-25 119.0 133 43.6
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-25 118.6 133 43.6
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-25 118.6 133 43.6
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 4.8e-25 118.2 133 43.6
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 6.3e-25 117.9 133 42.9
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 6.3e-25 117.9 133 42.9
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 6.3e-25 117.9 133 42.9
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 8.2e-25 117.5 133 43.6
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-24 116.7 133 42.9
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-24 116.7 133 42.9
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 3.1e-24 115.5 133 42.9
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 3.1e-24 115.5 133 42.9
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 4.1e-24 115.2 133 42.1
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 5.3e-24 114.8 133 41.4
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 7.0e-24 114.4 133 42.9
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-23 113.6 136 38.2
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-23 112.1 133 41.4
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.5e-23 112.1 136 39.0
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 4.5e-23 111.7 125 44.0
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 7.7e-23 110.9 135 40.0
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-22 110.2 135 42.2
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 8.5e-22 107.5 135 37.8
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 8.5e-22 107.5 133 41.4
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 8.5e-22 107.5 133 40.6
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-21 106.3 134 34.3
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 2.5e-21 105.9 136 34.6
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 2.5e-21 105.9 136 36.0
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-21 105.5 137 38.7
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 5.5e-21 104.8 136 34.6
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 5.5e-21 104.8 136 34.6
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 9.4e-21 104.0 137 38.0
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 1.2e-20 103.6 136 33.8
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 1.2e-20 103.6 136 33.8
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-20 103.2 137 38.0
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-20 102.8 133 39.1
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 2.7e-20 102.4 136 39.0
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-20 102.1 134 35.8
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-20 101.7 136 38.2
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 6.1e-20 101.3 134 35.1
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-19 100.5 136 38.2
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-19 100.5 64 68.8
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-19 100.1 111 45.0
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 3.0e-19 99.0 64 67.2
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 5.2e-19 98.2 133 38.3
C03p49680 Brassica napus HOM05D009411 ORTHO05D014997 5.2e-19 98.2 136 33.1
BolC3t17266H Brassica oleracea HOM05D009411 ORTHO05D014997 5.2e-19 98.2 136 33.1
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 6.8e-19 97.8 136 37.5
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 3.4e-18 95.5 137 38.0
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 3.4e-18 95.5 137 38.0
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.7e-17 93.2 134 31.3
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-17 92.4 133 37.6
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 3.7e-17 92.0 133 36.1
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-17 91.3 134 32.1
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 6.3e-17 91.3 134 32.1
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 8.3e-17 90.9 136 36.0
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 1.8e-16 89.7 134 32.8
BolC1t05558H Brassica oleracea HOM05D009411 ORTHO05D014997 1.8e-16 89.7 136 31.6
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 9.1e-16 87.4 132 33.3
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 9.1e-16 87.4 132 33.3
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-15 87.0 107 40.2
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-15 86.7 132 33.3
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-15 86.7 134 29.9
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-15 86.7 134 29.9
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-15 85.5 132 32.6
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-15 85.5 133 36.1
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-15 85.1 113 37.2
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 4.5e-15 85.1 113 37.2
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 5.9e-15 84.7 133 34.6
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 5.9e-15 84.7 88 47.7
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-14 83.2 134 31.3
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-14 83.2 74 52.7
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-14 83.2 134 29.9
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 1.7e-14 83.2 133 34.6
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 1.7e-14 83.2 74 52.7
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-14 82.8 132 32.6
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 2.9e-14 82.4 107 38.3
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 3.8e-14 82.0 134 29.1
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 5.0e-14 81.6 136 28.7
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 5.0e-14 81.6 134 29.1
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-14 81.3 74 52.7
A09p13700 Brassica napus HOM05D009411 ORTHO05D014997 6.5e-14 81.3 116 32.8
BraA09t40167Z Brassica rapa HOM05D009411 ORTHO05D014997 6.5e-14 81.3 116 32.8
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 8.5e-14 80.9 134 30.6
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-13 80.5 106 37.7
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.5e-13 80.1 131 34.4
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-13 79.7 134 28.4
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 3.2e-13 79.0 136 29.4
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 3.2e-13 79.0 136 27.9
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 3.2e-13 79.0 135 27.4
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 3.2e-13 79.0 136 29.4
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 4.2e-13 78.6 135 27.4
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 4.2e-13 78.6 136 28.7
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 4.2e-13 78.6 136 28.7
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 4.2e-13 78.6 134 28.4
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 5.5e-13 78.2 72 48.6
BcaB04g16904 Brassica carinata HOM05D008292 ORTHO05D003352 7.2e-13 77.8 136 29.4
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 9.4e-13 77.4 109 38.5
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 1.2e-12 77.0 137 29.9
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-12 76.6 88 42.0
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 2.1e-12 76.3 137 29.9
A09p47020 Brassica napus HOM05D009411 ORTHO05D014997 2.1e-12 76.3 106 32.1
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 2.7e-12 75.9 124 31.5
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-12 75.9 69 46.4
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 3.6e-12 75.5 134 28.4
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-12 75.5 112 34.8
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-12 75.5 138 29.7
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 3.6e-12 75.5 135 26.7
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-12 75.1 134 31.3
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-12 74.7 68 48.5
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-12 74.7 99 38.4
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 8.0e-12 74.3 125 26.4
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 1.0e-11 73.9 134 26.9
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 1.0e-11 73.9 134 26.9
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-11 72.8 137 29.2
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-11 72.0 89 41.6
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 5.2e-11 71.6 72 48.6
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-10 70.5 66 51.5
BcaB03g14108 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-10 68.9 74 44.6
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 4.4e-10 68.6 137 25.5
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 4.4e-10 68.6 85 41.2
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 7.5e-10 67.8 72 44.4
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 7.5e-10 67.8 72 47.2
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-09 67.0 71 38.0
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-09 67.0 71 38.0
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-09 67.0 71 38.0
BraA05t20816Z Brassica rapa HOM05D003839 ORTHO05D020172 2.8e-09 65.9 89 41.6
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.8e-09 65.9 72 36.1
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 3.7e-09 65.5 114 35.1
BolC5t34293H Brassica oleracea HOM05D021406 ORTHO05D020172 4.8e-09 65.1 88 42.0
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 4.8e-09 65.1 71 42.3
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 6.3e-09 64.7 113 29.2
BcaC06g33962 Brassica carinata HOM05D009411 ORTHO05D003352 8.3e-09 64.3 106 28.3
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 8.3e-09 64.3 63 49.2
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 8.3e-09 64.3 63 49.2
BcaC09g47930 Brassica carinata HOM05D008292 ORTHO05D003352 3.1e-08 62.4 134 26.1
C05p32830 Brassica napus HOM05D003839 ORTHO05D003352 4.1e-08 62.0 55 49.1
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-08 61.6 73 39.7
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 5.4e-08 61.6 67 40.3
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-07 60.1 73 39.7
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-07 60.1 64 45.3
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-07 60.1 76 35.5
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.7e-07 59.3 71 36.6
BcaC09g48196 Brassica carinata HOM05D003839 ORTHO05D039488 3.5e-07 58.9 37 70.3
BolC1t05291H Brassica oleracea HOM05D003839 ORTHO05D039488 3.5e-07 58.9 37 70.3
AT2G35280 Arabidopsis thaliana HOM05D008292 ORTHO05D003352 4.5e-07 58.5 74 37.8
BcaB05g23090 Brassica carinata HOM05D003839 ORTHO05D032372 4.5e-07 58.5 53 49.1
BcaC07g37358 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-06 57.0 41 58.5
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-06 56.6 117 27.4
C08p08050 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-06 56.6 40 60.0
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 1.7e-06 56.6 140 27.1
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 2.3e-06 56.2 50 48.0
A09p23690 Brassica napus HOM05D009411 ORTHO05D014107 3.8e-06 55.5 72 30.6


User provided reference genes

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