Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 2.5e-184 648.7 332 100.0
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 2.6e-181 638.6 332 98.8
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 2.6e-181 638.6 332 98.8
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 2.4e-171 605.5 332 92.8
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 2.4e-171 605.5 332 92.8
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 2.7e-146 522.3 335 80.9
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 1.6e-135 486.5 342 75.4
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 2.8e-135 485.7 335 76.4
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 2.8e-135 485.7 335 76.7
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 2.2e-132 476.1 342 78.9
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 5.6e-128 461.5 334 74.9
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 3.1e-126 455.7 336 75.3
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 5.3e-126 454.9 339 75.2
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 5.3e-126 454.9 334 74.3
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 9.0e-126 454.1 337 72.4
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 2.9e-124 449.1 341 73.3
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 6.4e-124 448.0 334 73.7
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 1.9e-120 436.4 338 71.9
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 1.9e-120 436.4 338 71.9
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 1.6e-119 433.3 342 72.8
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 4.8e-119 431.8 334 72.5
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 2.2e-108 396.4 344 68.0
BcaC02g09872 Brassica carinata HOM05D009749 ORTHO05D008033 1.4e-91 340.5 262 71.0
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 1.1e-59 234.6 185 69.7
Thhalv10006450m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 9.5e-51 204.9 157 73.9
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 6.8e-49 198.7 328 45.4
Aa31LG10G11650 Aethionema arabicum HOM05D009749 ORTHO05D008033 2.5e-35 153.7 142 63.4
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 1.2e-13 81.6 351 28.8
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 2.5e-11 73.9 401 27.2
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 7.4e-11 72.4 278 25.9
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 2.1e-10 70.9 242 29.8
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 6.2e-10 69.3 333 27.9
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 3.1e-09 67.0 256 27.7
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 5.3e-09 66.2 334 24.9
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 6.9e-09 65.9 345 25.2
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.2e-08 65.1 245 27.3
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 1.5e-08 64.7 242 28.9
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 3.4e-08 63.5 354 26.3
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 3.4e-08 63.5 347 25.9
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 3.4e-08 63.5 285 24.9
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 4.5e-08 63.2 320 24.4
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 4.5e-08 63.2 233 28.3
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 5.8e-08 62.8 285 25.3
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 5.8e-08 62.8 388 24.7
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 1.7e-07 61.2 320 26.9
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 2.2e-07 60.8 203 27.6
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 2.2e-07 60.8 376 25.0
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 2.2e-07 60.8 198 29.3
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 2.9e-07 60.5 252 26.2
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 3.8e-07 60.1 348 23.9
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 4.9e-07 59.7 282 26.6
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 8.4e-07 58.9 96 35.4
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 8.4e-07 58.9 96 35.4
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.1e-06 58.5 241 23.7
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 1.1e-06 58.5 234 27.4
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 2.5e-06 57.4 228 27.6
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 5.5e-06 56.2 278 27.3
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 5.5e-06 56.2 273 26.0
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 7.1e-06 55.8 109 33.9
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 7.1e-06 55.8 257 26.5
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 7.1e-06 55.8 229 24.9


User provided reference genes

Program Settings