Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 4.3e-144 515.0 336 100.0
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 4.3e-144 515.0 336 100.0
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 6.3e-135 484.6 337 93.5
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 6.3e-135 484.6 337 93.5
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 5.7e-128 461.5 336 88.1
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 4.8e-119 431.8 335 77.0
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.1e-115 420.6 332 76.8
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 2.1e-114 416.4 331 83.1
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 2.6e-112 409.5 334 76.6
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 7.5e-112 407.9 331 83.1
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 8.9e-89 331.3 331 71.6
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 4.4e-88 328.9 331 68.6
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 6.0e-69 265.4 332 63.6
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 4.8e-66 255.8 332 62.7
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 2.2e-63 246.9 332 61.1
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 3.8e-63 246.1 332 63.0
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 2.1e-53 213.8 319 54.9
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 4.6e-53 212.6 330 46.4
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 7.9e-53 211.8 331 43.5
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 3.3e-51 206.5 333 55.0
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 2.1e-50 203.8 281 54.1
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 6.5e-47 192.2 285 51.9
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 2.5e-46 190.3 324 49.1
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 9.3e-46 188.3 286 36.4
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 1.6e-45 187.6 307 45.6
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 1.6e-45 187.6 274 53.3
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.1e-45 187.2 333 49.8
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 4.6e-45 186.0 333 50.2
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.0e-44 184.9 334 40.4
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 2.3e-44 183.7 284 45.8
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 3.0e-44 183.3 332 35.5
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 1.1e-43 181.4 284 37.7
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 1.5e-43 181.0 338 34.3
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.9e-43 180.6 332 51.5
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 2.5e-43 180.3 283 38.9
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 2.1e-42 177.2 331 50.8
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 2.8e-42 176.8 282 36.5
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 3.7e-42 176.4 285 49.8
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 8.2e-42 175.3 269 38.7
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 1.8e-41 174.1 288 50.0
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 2.4e-41 173.7 337 49.3
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 1.2e-40 171.4 337 49.9
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 5.8e-40 169.1 319 33.5
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 6.5e-39 165.6 330 49.1
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 1.1e-38 164.9 285 51.6
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 9.3e-38 161.8 333 45.3
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 5.1e-36 156.0 285 52.6
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 6.7e-36 155.6 283 51.2
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 1.9e-35 154.1 285 41.1
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 7.4e-35 152.1 284 43.7
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 9.7e-35 151.8 283 51.2
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 1.4e-33 147.9 333 47.1
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 1.8e-33 147.5 284 48.6
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 2.4e-33 147.1 331 45.9
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 5.3e-33 146.0 187 61.5
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 9.0e-33 145.2 333 46.8
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 9.0e-33 145.2 333 46.8
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 7.7e-32 142.1 277 51.6
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 1.7e-31 141.0 300 46.0
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 1.7e-31 141.0 300 45.7
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 2.9e-31 140.2 287 47.0
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 8.5e-31 138.7 307 48.9
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 1.4e-30 137.9 300 45.3
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.5e-30 137.1 248 53.2
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 4.6e-29 132.9 285 47.7
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.0e-28 131.7 332 45.8
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 6.7e-28 129.0 280 48.6
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 1.1e-27 128.3 290 45.2
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 1.5e-27 127.9 332 45.5
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 1.5e-27 127.9 310 46.8
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 5.7e-27 125.9 285 49.8
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 1.3e-26 124.8 285 43.9
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 1.2e-24 118.2 282 48.6
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 1.3e-23 114.8 146 43.2
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 8.5e-23 112.1 307 39.4
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 3.2e-22 110.2 143 43.4
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 5.5e-22 109.4 130 41.5
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 8.8e-20 102.1 194 56.2
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 2.8e-18 97.1 284 39.4
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 4.5e-16 89.7 275 26.2
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 1.0e-15 88.6 274 45.3
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 8.5e-15 85.5 263 45.6
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 7.2e-14 82.4 155 35.5
ATR0030G034 Amborella trichopoda HOM05D007655 ORTHO05D009698 9.4e-14 82.0 149 31.5
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 2.1e-13 80.9 81 51.9
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 2.7e-13 80.5 167 29.9
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 4.7e-13 79.7 176 29.5
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 5.7e-11 72.8 132 30.3
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 1.3e-10 71.6 89 41.6
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 2.4e-09 67.4 287 35.9
Gohir.D07G184750 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.7e-07 61.2 103 38.8
Gorai.001G205200 Gossypium raimondii HOM05D007655 ORTHO05D009698 5.0e-07 59.7 99 38.4
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 2.5e-06 57.4 92 33.7


User provided reference genes

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