Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39860 Brassica carinata HOM05D000020 ORTHO05D001617 2.9e-14 80.5 36 100.0
C08p30450 Brassica napus HOM05D000020 ORTHO05D039617 2.9e-14 80.5 36 100.0
C08p30640 Brassica napus HOM05D000020 ORTHO05D001617 2.9e-14 80.5 36 100.0
BolC8t50681H Brassica oleracea HOM05D000020 ORTHO05D001617 2.9e-14 80.5 36 100.0
A09p48350 Brassica napus HOM05D000020 ORTHO05D001617 1.9e-13 77.8 36 97.2
BraA09t40287Z Brassica rapa HOM05D000020 ORTHO05D001617 1.9e-13 77.8 36 97.2
BcaC07g39843 Brassica carinata HOM05D000020 ORTHO05D039617 2.5e-13 77.4 35 94.3
A04p04520 Brassica napus HOM05D000020 ORTHO05D001617 5.5e-13 76.3 36 91.7
BraA04t16162Z Brassica rapa HOM05D000020 ORTHO05D001617 5.5e-13 76.3 36 91.7
BcaB01g00101 Brassica carinata HOM05D000020 ORTHO05D001617 1.2e-12 75.1 36 91.7
BcaC02g09756 Brassica carinata HOM05D000020 ORTHO05D001617 1.6e-12 74.7 36 88.9
C04p36950 Brassica napus HOM05D000020 ORTHO05D001617 1.6e-12 74.7 36 88.9
BolC4t25260H Brassica oleracea HOM05D000020 ORTHO05D001617 1.6e-12 74.7 36 88.9
Thhalv10010363m.g Eutrema salsugineum HOM05D000020 ORTHO05D001617 2.1e-12 74.3 36 88.9
Sp5g07040 Schrenkiella parvula HOM05D000020 ORTHO05D001617 2.1e-12 74.3 36 88.9
BcaB02g08422 Brassica carinata HOM05D000020 ORTHO05D001617 4.7e-12 73.2 36 86.1
AT3G55430 Arabidopsis thaliana HOM05D000020 ORTHO05D001617 1.8e-11 71.2 36 86.1
AL5G36580 Arabidopsis lyrata HOM05D000020 ORTHO05D001617 2.3e-11 70.9 36 83.3
CARHR165450 Cardamine hirsuta HOM05D000020 ORTHO05D001617 5.2e-11 69.7 36 83.3
Carub.0005s2215 Capsella rubella HOM05D000020 ORTHO05D001617 8.8e-11 68.9 36 80.6
BcaB02g07690 Brassica carinata HOM05D000020 ORTHO05D001617 5.7e-10 66.2 36 77.8
BcaC08g44734 Brassica carinata HOM05D000020 ORTHO05D001617 1.7e-09 64.7 36 75.0
C06p22680 Brassica napus HOM05D000020 ORTHO05D001617 1.7e-09 64.7 36 75.0
A07p22480 Brassica napus HOM05D000020 ORTHO05D001617 2.2e-09 64.3 36 75.0
BraA07t29924Z Brassica rapa HOM05D000020 ORTHO05D001617 2.2e-09 64.3 36 75.0
Aa31LG10G10460 Aethionema arabicum HOM05D000020 ORTHO05D001617 3.7e-09 63.5 35 77.1
THA.LOC104810029 Tarenaya hassleriana HOM05D000020 ORTHO05D001617 4.8e-09 63.2 36 69.4


User provided reference genes

Program Settings