Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p30330 Brassica napus HOM05D004999 ORTHO05D007513 4.9e-146 521.2 272 100.0
BolC3t15374H Brassica oleracea HOM05D004999 ORTHO05D007513 1.1e-49 201.1 190 65.8
BcaB01g03255 Brassica carinata HOM05D004999 ORTHO05D007513 3.9e-42 176.0 174 60.3
A03p25340 Brassica napus HOM05D004999 ORTHO05D007513 8.6e-42 174.9 177 61.0
C04p71790 Brassica napus HOM05D004999 ORTHO05D007513 1.9e-41 173.7 176 60.2
BraA03t11740Z Brassica rapa HOM05D004999 ORTHO05D007513 2.5e-41 173.3 177 61.0
A04p33990 Brassica napus HOM05D004999 ORTHO05D007513 7.3e-41 171.8 176 59.7
BraA04t18860Z Brassica rapa HOM05D004999 ORTHO05D007513 7.3e-41 171.8 176 59.7
BcaC01g05108 Brassica carinata HOM05D004999 ORTHO05D007513 4.7e-40 169.1 171 61.4
C03p30250 Brassica napus HOM05D004999 ORTHO05D007513 4.7e-40 169.1 171 61.4
AT2G45730 Arabidopsis thaliana HOM05D004999 ORTHO05D007513 6.2e-40 168.7 174 58.0
Thhalv10001448m.g Eutrema salsugineum HOM05D004999 ORTHO05D007513 1.1e-39 167.9 176 57.4
AL4G44920 Arabidopsis lyrata HOM05D004999 ORTHO05D007513 1.8e-39 167.2 174 57.5
Carub.0004s2839 Capsella rubella HOM05D004999 ORTHO05D007513 3.1e-39 166.4 174 58.0
BcaC02g07075 Brassica carinata HOM05D004999 ORTHO05D007513 6.8e-39 165.2 172 59.9
BolC4t28677H Brassica oleracea HOM05D004999 ORTHO05D007513 6.8e-39 165.2 172 59.9
Sp4g27780 Schrenkiella parvula HOM05D004999 ORTHO05D007513 6.8e-39 165.2 174 56.9
CARHR140980 Cardamine hirsuta HOM05D004999 ORTHO05D007513 1.2e-38 164.5 176 55.7
BcaB02g09016 Brassica carinata HOM05D004999 ORTHO05D007513 3.2e-36 156.4 183 54.1
Aa31LG9G12650 Aethionema arabicum HOM05D004999 ORTHO05D007513 3.5e-35 152.9 176 54.0
THA.LOC104806888 Tarenaya hassleriana HOM05D004999 ORTHO05D007513 2.4e-31 140.2 173 49.7
Manes.05G148301 Manihot esculenta HOM05D004999 ORTHO05D007513 9.6e-25 118.2 175 44.0
TWI36G1418 Tripterygium wilfordii HOM05D004999 ORTHO05D007513 2.8e-24 116.7 182 42.9
TWI56G0255 Tripterygium wilfordii HOM05D004999 ORTHO05D007513 3.6e-24 116.3 190 41.1
SGA_v2.0_scaffold11G05913 Striga asiatica HOM05D004999 ORTHO05D007513 4.8e-24 115.9 183 40.4
MBI09_g25164_MAGBIO Magnolia biondii HOM05D004999 ORTHO05D007513 1.1e-23 114.8 161 45.3
Ca_13413_v3 Cicer arietinum L. HOM05D004999 ORTHO05D007513 1.8e-23 114.0 190 43.2
vmacro21722 Vaccinium macrocarpon HOM05D004999 ORTHO05D007513 1.8e-23 114.0 198 40.4
Atru.chr13.305 Acer truncatum HOM05D004999 ORTHO05D007513 3.1e-23 113.2 179 43.0
MD08G1013700 Malus domestica HOM05D004999 ORTHO05D007513 3.1e-23 113.2 170 45.3
Lj4A25T52 Lonicera japonica HOM05D004999 ORTHO05D007513 4.0e-23 112.8 168 41.7
Actinidia15416 Actinidia chinensis HOM05D004999 ORTHO05D007513 6.9e-23 112.1 205 41.5
Nitab4.5_0001540g0030 Nicotiana tabacum HOM05D004999 ORTHO05D007513 6.9e-23 112.1 161 42.9
DCAR_017472 Daucus carota HOM05D004999 ORTHO05D007513 9.0e-23 111.7 162 43.2
MD15G1013300 Malus domestica HOM05D004999 ORTHO05D007513 1.2e-22 111.3 161 45.3
Oeu020873.1 Olea europaea HOM05D004999 ORTHO05D007513 1.2e-22 111.3 164 43.3
AUR62007769 Chenopodium quinoa HOM05D004999 ORTHO05D007513 1.5e-22 110.9 165 41.8
FvH4_2g38570 Fragaria vesca HOM05D004999 ORTHO05D007513 1.5e-22 110.9 175 43.4
Nn1g05879 Nelumbo nucifera HOM05D004999 ORTHO05D007513 1.5e-22 110.9 181 42.5
Dinv39509 Davidia involucrata HOM05D004999 ORTHO05D007513 2.0e-22 110.5 180 41.7
Rhsim06G0021900 Rhododendron simsii HOM05D004999 ORTHO05D007513 2.6e-22 110.2 165 41.8
Sabra02G0019000 Salix brachista HOM05D004999 ORTHO05D007513 2.6e-22 110.2 144 47.9
FAN27G0904 Fragaria x ananassa HOM05D004999 ORTHO05D007513 3.4e-22 109.8 175 42.9
Zm00001eb142530 Zea mays HOM05D004999 ORTHO05D007513 3.4e-22 109.8 156 46.2
HanXRQChr14g0430231 Helianthus annuus HOM05D004999 ORTHO05D007513 7.6e-22 108.6 188 40.4
RcHm_v2.0_Chr6g0302731 Rosa chinensis HOM05D004999 ORTHO05D007513 9.9e-22 108.2 173 43.4
Migut.C00822 Erythranthe guttata HOM05D004999 ORTHO05D007513 1.3e-21 107.8 173 40.5
Medtr1g024920 Medicago truncatula HOM05D004999 ORTHO05D007513 1.3e-21 107.8 190 43.2
COL.COLO4_26158 Corchorus olitorius HOM05D004999 ORTHO05D007513 1.7e-21 107.5 186 41.9
Lsat_1_v5_gn_2_8681 Lactuca sativa HOM05D004999 ORTHO05D007513 1.7e-21 107.5 162 42.6
Aqoxy5G01776 Aquilegia oxysepala HOM05D004999 ORTHO05D007513 2.2e-21 107.1 151 44.4
EL10Ac6g14553 Beta vulgaris HOM05D004999 ORTHO05D007513 2.2e-21 107.1 167 41.9
CDE09G1336 Ceratophyllum demersum HOM05D004999 ORTHO05D007513 2.2e-21 107.1 179 41.3
AUR62002963 Chenopodium quinoa HOM05D004999 ORTHO05D007513 2.2e-21 107.1 166 42.8
Eucgr.F01642 Eucalyptus grandis HOM05D004999 ORTHO05D007513 2.9e-21 106.7 182 39.0
Gorai.009G195100 Gossypium raimondii HOM05D004999 ORTHO05D007513 2.9e-21 106.7 179 40.2
Prupe.1G366700 Prunus persica HOM05D004999 ORTHO05D007513 2.9e-21 106.7 173 43.9
Os04g0112300 Oryza sativa ssp. japonica HOM05D004999 ORTHO05D007513 3.8e-21 106.3 138 48.6
Peaxi162Scf00438g00629 Petunia axillaris HOM05D004999 ORTHO05D007513 3.8e-21 106.3 190 36.8
Potri.002G023300 Populus trichocarpa HOM05D004999 ORTHO05D007513 3.8e-21 106.3 157 42.7
HPP92_022409 Vanilla planifolia HOM05D004999 ORTHO05D007513 3.8e-21 106.3 171 40.9
Ciclev10001119m.g Citrus clementina HOM05D004999 ORTHO05D007513 4.9e-21 105.9 168 41.7
Duzib093G1482 Durio zibethinus HOM05D004999 ORTHO05D007513 4.9e-21 105.9 179 40.8
PGR083G2044 Punica granatum HOM05D004999 ORTHO05D007513 4.9e-21 105.9 164 44.5
ECA238G1075 Erigeron canadensis HOM05D004999 ORTHO05D007513 6.4e-21 105.5 153 45.1
Lalb_Chr24g0398721 Lupinus albus HOM05D004999 ORTHO05D007513 6.4e-21 105.5 147 49.0
Thecc.08G043100 Theobroma cacao HOM05D004999 ORTHO05D007513 6.4e-21 105.5 179 40.2
Gohir.D05G189800 Gossypium hirsutum HOM05D004999 ORTHO05D007513 8.4e-21 105.1 179 40.2
HPP92_027505 Vanilla planifolia HOM05D004999 ORTHO05D007513 8.4e-21 105.1 171 40.4
GSVIVG01009891001 Vitis vinifera HOM05D004999 ORTHO05D007513 1.1e-20 104.8 163 42.3
Lj5g0025890 Lotus japonicus HOM05D004999 ORTHO05D007513 1.4e-20 104.4 147 47.6
CSS0048815 Camellia sinensis var. sinensis HOM05D004999 ORTHO05D007513 1.9e-20 104.0 151 43.0
CiPaw.08G065700 Carya illinoinensis HOM05D004999 ORTHO05D007513 1.9e-20 104.0 136 48.5
arahy.Tifrunner.gnm1.ann1.A5JBZH Arachis hypogaea HOM05D004999 ORTHO05D007513 2.4e-20 103.6 194 40.2
arahy.Tifrunner.gnm1.ann1.BI3E2S Arachis hypogaea HOM05D004999 ORTHO05D007513 2.4e-20 103.6 194 40.2
Gohir.A05G186900 Gossypium hirsutum HOM05D004999 ORTHO05D007513 2.4e-20 103.6 179 39.1
Solyc04g081360.3 Solanum lycopersicum HOM05D004999 ORTHO05D007513 2.4e-20 103.6 149 43.0
CAN.G311.21 Capsicum annuum HOM05D004999 ORTHO05D007513 3.2e-20 103.2 149 43.0
MELO3C011005.2 Cucumis melo HOM05D004999 ORTHO05D007513 3.2e-20 103.2 184 39.1
CsaV3_2G029460 Cucumis sativus L. HOM05D004999 ORTHO05D007513 4.2e-20 102.8 210 38.6
Psat5g146560 Pisum sativum HOM05D004999 ORTHO05D007513 4.2e-20 102.8 146 47.9
PGSC0003DMG400003779 Solanum tuberosum HOM05D004999 ORTHO05D007513 5.4e-20 102.4 150 43.3
Glyma.14G218500 Glycine max HOM05D004999 ORTHO05D007513 7.1e-20 102.1 203 37.9
Sopen04g034980 Solanum pennellii HOM05D004999 ORTHO05D007513 7.1e-20 102.1 149 42.3
ClCG08G014370 Citrullus lanatus HOM05D004999 ORTHO05D007513 9.3e-20 101.7 198 38.4
Dinv31836 Davidia involucrata HOM05D004999 ORTHO05D007513 9.3e-20 101.7 160 41.2
SalBow7G4700 Salvia bowleyana HOM05D004999 ORTHO05D007513 9.3e-20 101.7 169 39.6
TAR381G0667 Trochodendron aralioides HOM05D004999 ORTHO05D007513 9.3e-20 101.7 177 41.2
Cc10_g01760 Coffea canephora HOM05D004999 ORTHO05D007513 1.6e-19 100.9 175 40.6
QL02p011429 Quercus lobata HOM05D004999 ORTHO05D007513 1.6e-19 100.9 177 40.7
Sed0007289 Sechium edule HOM05D004999 ORTHO05D007513 1.6e-19 100.9 161 44.1
C09p29400 Brassica napus HOM05D004999 ORTHO05D040156 2.1e-19 100.5 172 43.6
FAN20G3168 Fragaria x ananassa HOM05D004999 ORTHO05D007513 2.1e-19 100.5 175 41.7
BolC9t55805H Brassica oleracea HOM05D004999 ORTHO05D040156 2.7e-19 100.1 169 43.8
Duzib041G0279 Durio zibethinus HOM05D004999 ORTHO05D007513 3.5e-19 99.8 170 41.8
FAN15G0085 Fragaria x ananassa HOM05D004999 ORTHO05D007513 3.5e-19 99.8 175 41.7
Phvul.001G007200 Phaseolus vulgaris HOM05D004999 ORTHO05D007513 3.5e-19 99.8 158 43.7
TPR.G30999 Trifolium pratense HOM05D004999 ORTHO05D007513 3.5e-19 99.8 163 44.8
Lj5g0016888 Lotus japonicus HOM05D004999 ORTHO05D007513 4.6e-19 99.4 208 38.9
TPR.G34334 Trifolium pratense HOM05D004999 ORTHO05D007513 6.0e-19 99.0 190 40.5
Haze_22624 Corylus avellana HOM05D004999 ORTHO05D007513 7.9e-19 98.6 174 39.7
Glyma.17G257600 Glycine max HOM05D004999 ORTHO05D007513 7.9e-19 98.6 157 43.9
VMungo0647G0227 Vigna mungo HOM05D004999 ORTHO05D007513 1.0e-18 98.2 157 43.3
Cfa013940 Carpinus fangiana HOM05D004999 ORTHO05D007513 1.3e-18 97.8 146 43.8
Sc02g0008530 Simmondsia chinensis HOM05D004999 ORTHO05D007513 3.0e-18 96.7 141 41.8
CANSAT01G2959 Cannabis sativa HOM05D004999 ORTHO05D007513 3.9e-18 96.3 135 45.2
PSO170G1336 Papaver somniferum HOM05D004999 ORTHO05D007513 1.9e-17 94.0 142 43.7
PSO700G0267 Papaver somniferum HOM05D004999 ORTHO05D007513 2.5e-17 93.6 142 43.7
unitig_749.g13859 Utricularia gibba HOM05D004999 ORTHO05D007513 4.3e-17 92.8 219 35.2
ATR0767G249 Amborella trichopoda HOM05D004999 ORTHO05D007513 6.2e-16 89.0 139 43.2
Pp3c13_19410 Physcomitrium patens HOM05D004999 ORTHO05D007513 9.0e-15 85.1 182 33.5
Ah.04g153930 Amaranthus hybridus HOM05D004999 ORTHO05D007513 4.5e-14 82.8 175 36.0
Actinidia16981 Actinidia chinensis HOM05D004999 ORTHO05D007513 1.3e-13 81.3 171 38.0
Mapoly0050s0121 Marchantia polymorpha HOM05D004999 ORTHO05D007513 2.2e-13 80.5 148 37.8
Potri.005G238200 Populus trichocarpa HOM05D004999 ORTHO05D007513 2.9e-13 80.1 123 45.5
SMO367G0765 Selaginella moellendorffii HOM05D004999 ORTHO05D007513 2.9e-13 80.1 134 41.8
CBR_g45432 Chara braunii HOM05D004999 ORTHO05D007513 3.8e-13 79.7 192 31.8
Zm00001eb363800 Zea mays HOM05D004999 ORTHO05D007513 7.1e-12 75.5 112 47.3
Hund05204 Selenicereus undatus HOM05D004999 ORTHO05D007513 9.3e-12 75.1 239 28.5
AagrBONN_evm.TU.Sc2ySwM_344.355 Anthoceros agrestis HOM05D004999 ORTHO05D007513 2.1e-11 73.9 179 34.1
Cpa.g.sc8.166 Carica papaya HOM05D004999 ORTHO05D007513 1.3e-10 71.2 72 51.4
SEGI_23149 Sequoiadendron giganteum HOM05D004999 ORTHO05D007513 1.3e-08 64.7 68 52.9
AL825U10010 Arabidopsis lyrata HOM05D004999 ORTHO05D007513 2.1e-08 63.9 50 58.0
Cre12.g543100 Chlamydomonas reinhardtii HOM05D004999 ORTHO05D007513 6.2e-08 62.4 164 34.1
Thhalv10014705m.g Eutrema salsugineum HOM05D004999 ORTHO05D007513 8.1e-08 62.0 38 78.9
MCO06G251 Micromonas commoda HOM05D004999 ORTHO05D007513 3.4e-06 56.6 181 29.3
BcaC01g01121 Brassica carinata HOM05D004999 ORTHO05D024221 1.0e-05 55.1 28 92.9


User provided reference genes

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