Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 1.1e-75 286.6 146 100.0
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 1.2e-74 283.1 145 99.3
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 1.9e-72 275.8 145 96.6
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 3.3e-72 275.0 145 95.9
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 3.3e-72 275.0 145 95.9
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 8.1e-71 270.4 140 97.1
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 1.4e-70 269.6 140 97.1
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 1.8e-70 269.2 145 93.1
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 5.2e-70 267.7 145 92.4
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 5.2e-70 267.7 145 92.4
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 7.6e-69 263.8 145 91.7
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 3.8e-68 261.5 133 100.0
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 1.4e-67 259.6 145 90.3
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 5.4e-67 257.7 145 88.3
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 1.6e-66 256.1 145 89.0
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 2.1e-66 255.8 145 88.3
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 3.9e-65 251.5 140 88.6
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 1.3e-60 236.5 164 76.2
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 1.4e-51 206.5 140 72.1
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 1.2e-50 203.4 140 70.0
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 1.6e-50 203.0 140 69.3
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 1.6e-50 203.0 143 69.2
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.6e-50 203.0 140 70.7
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 2.1e-50 202.6 145 69.0
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 2.1e-50 202.6 145 69.7
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 2.1e-50 202.6 139 70.5
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 2.7e-50 202.2 145 67.6
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 3.5e-50 201.8 140 71.4
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 3.5e-50 201.8 145 67.6
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 4.6e-50 201.4 140 72.1
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 4.6e-50 201.4 145 69.0
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 4.6e-50 201.4 145 69.0
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 6.0e-50 201.1 136 72.1
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.0e-49 200.3 145 68.3
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.8e-49 199.5 145 68.3
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 1.8e-49 199.5 136 72.1
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 3.0e-49 198.7 136 72.1
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 8.7e-49 197.2 136 69.9
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 1.1e-48 196.8 145 66.2
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 3.3e-48 195.3 134 71.6
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 4.3e-48 194.9 134 70.9
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 9.6e-48 193.7 140 68.6
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 9.6e-48 193.7 140 68.6
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 9.6e-48 193.7 141 68.1
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 2.1e-47 192.6 133 66.9
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 2.1e-47 192.6 140 65.7
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 2.8e-47 192.2 134 69.4
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 6.2e-47 191.0 140 65.7
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 8.2e-47 190.7 136 69.9
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 8.2e-47 190.7 136 69.1
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 1.4e-46 189.9 136 66.2
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 1.4e-46 189.9 136 69.1
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 1.4e-46 189.9 140 64.3
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 1.4e-46 189.9 140 67.1
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.4e-46 189.1 136 65.4
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 2.4e-46 189.1 136 69.1
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 3.1e-46 188.7 145 61.4
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 4.0e-46 188.3 140 63.6
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 5.3e-46 188.0 142 64.1
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 9.0e-46 187.2 144 66.0
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 1.2e-45 186.8 140 62.9
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 1.5e-45 186.4 140 64.3
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 2.0e-45 186.0 140 62.1
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 2.6e-45 185.7 141 63.1
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 3.4e-45 185.3 141 61.7
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 3.4e-45 185.3 134 64.9
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 4.5e-45 184.9 140 64.3
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 5.8e-45 184.5 134 64.9
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 5.8e-45 184.5 134 64.9
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 5.8e-45 184.5 134 64.9
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 5.8e-45 184.5 141 62.4
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 2.2e-44 182.6 149 58.4
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 2.2e-44 182.6 134 66.4
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 2.9e-44 182.2 141 63.1
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 6.5e-44 181.0 142 60.6
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 1.4e-43 179.9 140 62.1
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 1.9e-43 179.5 140 62.9
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 4.2e-43 178.3 140 61.4
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 5.5e-43 177.9 140 62.1
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 9.3e-43 177.2 137 64.2
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 1.2e-42 176.8 137 63.5
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 2.1e-42 176.0 136 63.2
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 3.5e-42 175.3 134 64.9
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 4.6e-42 174.9 145 61.4
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 6.0e-42 174.5 137 62.0
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.0e-41 173.7 137 63.5
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.0e-41 173.7 137 63.5
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 3.9e-41 171.8 138 64.5
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.1e-40 170.2 141 54.6
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 2.5e-40 169.1 134 61.2
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 4.3e-40 168.3 139 59.0
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 7.4e-40 167.5 140 54.3
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 4.8e-39 164.9 140 56.4
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 9.0e-38 160.6 136 56.6
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 4.2e-35 151.8 142 56.3
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 2.1e-34 149.4 140 54.3
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 2.1e-34 149.4 117 60.7
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 3.6e-34 148.7 142 56.3
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 3.6e-34 148.7 142 49.3
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 7.9e-34 147.5 146 52.7
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 1.4e-33 146.7 134 55.2
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 6.7e-33 144.4 149 53.7
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 1.3e-31 140.2 89 73.0
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 1.3e-31 140.2 89 69.7
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 3.4e-29 132.1 139 43.9
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 7.7e-29 131.0 125 52.0
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.7e-28 129.8 89 64.0
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 1.4e-27 126.7 88 63.6
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 5.1e-25 118.2 120 52.5
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 2.5e-19 99.4 62 72.6
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 1.0e-17 94.0 132 40.2
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 2.4e-14 82.8 138 37.0
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 2.3e-09 66.2 33 84.8
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 8.8e-09 64.3 33 78.8
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 2.6e-08 62.8 81 42.0
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 5.7e-08 61.6 64 53.1
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 2.2e-07 59.7 75 42.7
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 2.8e-07 59.3 33 75.8


User provided reference genes

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