Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p28980 Brassica napus HOM05D008508 ORTHO05D003325 7.4e-129 464.2 283 100.0
A09p46660 Brassica napus HOM05D008508 ORTHO05D003325 2.0e-105 386.3 285 89.5
BcaC07g39726 Brassica carinata HOM05D008508 ORTHO05D003325 6.3e-88 328.2 213 100.0
BolC8t50501H Brassica oleracea HOM05D008508 ORTHO05D003325 2.0e-78 296.6 214 92.1
BraA09t40129Z Brassica rapa HOM05D008508 ORTHO05D003325 1.5e-76 290.4 213 92.0
BcaB01g00256 Brassica carinata HOM05D008508 ORTHO05D003325 1.1e-58 231.1 221 73.8
Sp5g08700 Schrenkiella parvula HOM05D008508 ORTHO05D003325 1.2e-57 227.6 221 78.3
Thhalv10010719m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 8.7e-53 211.5 222 72.1
AL5G34640 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 9.0e-50 201.4 222 60.4
BraA07t29860Z Brassica rapa HOM05D008508 ORTHO05D003325 1.7e-48 197.2 218 72.0
AT3G53670 Arabidopsis thaliana HOM05D008508 ORTHO05D003325 7.1e-47 191.8 219 69.9
Carub.0005s2025 Capsella rubella HOM05D008508 ORTHO05D003325 8.7e-45 184.9 221 66.5
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 1.9e-44 183.7 276 51.4
BcaB02g07768 Brassica carinata HOM05D008508 ORTHO05D003325 2.5e-44 183.3 217 68.2
A07p21780 Brassica napus HOM05D008508 ORTHO05D003325 7.6e-41 171.8 216 66.2
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 1.1e-39 167.9 217 51.6
Sp4g19810 Schrenkiella parvula HOM05D008508 ORTHO05D003325 7.9e-38 161.8 215 58.1
Carub.0004s1941 Capsella rubella HOM05D008508 ORTHO05D003325 5.1e-37 159.1 213 57.3
BcaB01g03773 Brassica carinata HOM05D008508 ORTHO05D003325 7.4e-36 155.2 217 47.9
A03p20680 Brassica napus HOM05D008508 ORTHO05D003325 1.3e-35 154.5 215 55.3
BraA03t11309Z Brassica rapa HOM05D008508 ORTHO05D003325 1.3e-35 154.5 215 55.3
AT2G37480 Arabidopsis thaliana HOM05D008508 ORTHO05D003325 2.8e-35 153.3 217 53.9
BolC6t37349H Brassica oleracea HOM05D008508 ORTHO05D003325 3.7e-35 152.9 215 61.4
AL4G33940 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 1.1e-34 151.4 213 55.4
BcaC01g05613 Brassica carinata HOM05D008508 ORTHO05D003325 1.1e-34 151.4 216 52.8
C03p24300 Brassica napus HOM05D008508 ORTHO05D003325 1.1e-34 151.4 216 52.8
BolC3t14826H Brassica oleracea HOM05D008508 ORTHO05D003325 1.1e-34 151.4 216 52.8
Thhalv10017918m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 1.5e-33 147.5 213 54.0
BcaC02g11856 Brassica carinata HOM05D008508 ORTHO05D003325 1.7e-32 144.1 214 58.9
BolC4t22647H Brassica oleracea HOM05D008508 ORTHO05D003325 3.8e-32 142.9 214 59.8
C04p10560 Brassica napus HOM05D008508 ORTHO05D003325 4.9e-32 142.5 214 58.4
CARHR163580 Cardamine hirsuta HOM05D008508 ORTHO05D003325 4.9e-32 142.5 260 52.7
C06p21610 Brassica napus HOM05D008508 ORTHO05D003325 2.4e-31 140.2 215 57.7
BcaC08g44645 Brassica carinata HOM05D008508 ORTHO05D003325 3.2e-31 139.8 215 57.7
AL4G33980 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 4.2e-31 139.4 215 52.1
BcaB06g28998 Brassica carinata HOM05D008508 ORTHO05D003325 1.2e-30 137.9 161 52.8
BraA04t18340Z Brassica rapa HOM05D008508 ORTHO05D003325 2.7e-30 136.7 213 56.8
THA.LOC104805432 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 7.9e-30 135.2 149 54.4
C04p65950 Brassica napus HOM05D008508 ORTHO05D003325 1.3e-29 134.4 214 50.5
BolC4t28099H Brassica oleracea HOM05D008508 ORTHO05D003325 3.9e-29 132.9 214 50.0
BcaB02g09283 Brassica carinata HOM05D008508 ORTHO05D003325 7.4e-28 128.6 221 51.1
BraA05t19816Z Brassica rapa HOM05D008508 ORTHO05D003325 4.8e-27 125.9 214 53.3
A05p08470 Brassica napus HOM05D008508 ORTHO05D003325 1.8e-26 124.0 214 54.2
A04p28630 Brassica napus HOM05D008508 ORTHO05D003325 6.9e-26 122.1 213 52.1
THA.LOC104806576 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 7.9e-22 108.6 153 48.4
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 7.7e-17 92.0 119 47.9
THA.LOC104824529 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 2.5e-15 87.0 111 46.8
BcaB01g00255 Brassica carinata HOM05D008508 ORTHO05D003325 3.0e-13 80.1 97 74.2
CARHR132130 Cardamine hirsuta HOM05D008508 ORTHO05D003325 3.1e-10 70.1 87 50.6
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 4.5e-09 66.2 95 43.2
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 7.7e-09 65.5 142 35.2
Medtr1g068825 Medicago truncatula HOM05D004206 ORTHO05D003325 7.7e-09 65.5 81 48.1
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 1.0e-08 65.1 88 50.0
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 1.7e-08 64.3 101 40.6
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 2.2e-08 63.9 155 38.1
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 2.9e-08 63.5 235 31.9
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 3.8e-08 63.2 150 35.3
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 5.0e-08 62.8 95 38.9
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 1.1e-07 61.6 86 43.0
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 1.4e-07 61.2 56 50.0
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 1.4e-07 61.2 140 35.0
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 3.2e-07 60.1 242 28.9
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 3.2e-07 60.1 108 39.8
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 4.2e-07 59.7 45 64.4
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 4.2e-07 59.7 55 54.5
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 4.2e-07 59.7 63 50.8
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 5.5e-07 59.3 102 39.2
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 5.5e-07 59.3 173 31.8
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 7.2e-07 58.9 49 61.2
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 7.2e-07 58.9 48 60.4
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 9.4e-07 58.5 156 36.5
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 9.4e-07 58.5 48 60.4
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 9.4e-07 58.5 134 34.3
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 9.4e-07 58.5 47 59.6
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.2e-06 58.2 138 33.3
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 1.2e-06 58.2 129 38.8
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 1.2e-06 58.2 59 50.8
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 1.2e-06 58.2 120 34.2
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 1.2e-06 58.2 107 39.3
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 1.2e-06 58.2 99 40.4
Carub.0005s2024 Capsella rubella HOM05D013670 ORTHO05D016164 1.6e-06 57.8 37 81.1
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.6e-06 57.8 138 31.9
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 2.1e-06 57.4 159 35.2
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 2.1e-06 57.4 134 35.8
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 2.1e-06 57.4 125 36.8
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 2.7e-06 57.0 43 65.1
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 2.7e-06 57.0 109 37.6
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.7e-06 57.0 44 63.6
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 2.7e-06 57.0 44 63.6
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 3.6e-06 56.6 143 39.2
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 3.6e-06 56.6 55 50.9
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 4.7e-06 56.2 73 42.5
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 4.7e-06 56.2 260 31.5
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 4.7e-06 56.2 132 34.1
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 4.7e-06 56.2 64 48.4
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 4.7e-06 56.2 46 54.3
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 6.1e-06 55.8 73 45.2
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 6.1e-06 55.8 128 34.4
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 6.1e-06 55.8 109 36.7
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 6.1e-06 55.8 48 56.2
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 7.9e-06 55.5 125 33.6
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 7.9e-06 55.5 56 46.4
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 7.9e-06 55.5 109 37.6


User provided reference genes

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