Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 8.7e-114 413.7 215 100.0
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 1.1e-108 396.7 219 95.9
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 1.7e-96 356.3 184 100.0
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 4.5e-94 348.2 217 84.3
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 1.7e-85 319.7 192 87.0
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 4.7e-83 311.6 190 87.9
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 8.2e-80 300.8 194 82.0
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 9.1e-79 297.4 194 82.0
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 1.2e-78 297.0 191 81.7
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 2.7e-78 295.8 195 80.0
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 1.0e-77 293.9 196 80.6
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 1.5e-76 290.0 195 81.0
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 2.0e-73 279.6 204 77.0
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 3.4e-73 278.9 194 81.4
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 1.4e-71 273.5 195 75.4
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 1.8e-71 273.1 195 75.4
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 2.7e-70 269.2 197 78.7
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 2.2e-69 266.2 197 78.2
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 2.2e-69 266.2 200 77.0
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 2.9e-69 265.8 200 71.5
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 6.1e-67 258.1 186 73.7
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 7.5e-65 251.1 197 68.0
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 1.8e-63 246.5 191 69.1
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 1.5e-60 236.9 201 60.2
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 4.3e-60 235.3 199 62.3
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 1.6e-59 233.4 205 62.9
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 1.6e-59 233.4 197 62.4
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 1.6e-59 233.4 193 63.2
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 3.6e-59 232.3 190 67.4
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 1.0e-58 230.7 204 64.2
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 1.0e-58 230.7 201 61.2
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 1.8e-58 229.9 222 61.7
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 4.0e-58 228.8 220 61.4
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 6.8e-58 228.0 198 60.6
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 6.8e-58 228.0 200 62.5
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 6.8e-58 228.0 200 62.5
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 8.9e-58 227.6 195 61.0
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.5e-57 226.9 200 62.5
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 1.5e-57 226.9 196 62.8
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 1.5e-57 226.9 196 62.8
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 1.5e-57 226.9 220 58.6
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 4.4e-57 225.3 193 62.7
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 4.4e-57 225.3 192 62.0
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 1.7e-56 223.4 206 58.7
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 2.2e-56 223.0 201 62.2
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 2.2e-56 223.0 204 61.8
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 3.7e-56 222.2 202 62.9
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 3.7e-56 222.2 211 57.8
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 6.4e-56 221.5 217 58.1
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 6.4e-56 221.5 199 62.8
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 1.1e-55 220.7 200 63.5
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 1.4e-55 220.3 206 63.1
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 1.8e-55 219.9 214 58.4
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 3.2e-55 219.2 193 62.7
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 1.2e-54 217.2 199 62.8
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 1.6e-54 216.9 206 57.3
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 4.6e-54 215.3 211 60.2
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 4.6e-54 215.3 213 60.1
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 5.9e-54 214.9 188 64.4
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 7.8e-54 214.5 208 59.1
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 1.0e-53 214.2 198 60.6
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 1.3e-53 213.8 208 56.7
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 2.3e-53 213.0 206 58.3
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 3.0e-53 212.6 218 56.9
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 3.9e-53 212.2 205 56.6
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 3.9e-53 212.2 197 60.9
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 6.6e-53 211.5 211 55.9
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 1.5e-52 210.3 211 56.9
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 2.5e-52 209.5 199 56.3
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 4.3e-52 208.8 189 57.1
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 4.3e-52 208.8 206 56.3
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 5.6e-52 208.4 202 58.4
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 7.3e-52 208.0 207 55.6
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 7.3e-52 208.0 207 55.6
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 1.0e-50 204.1 202 55.9
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 2.3e-50 203.0 211 57.8
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 3.1e-50 202.6 214 53.7
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 4.0e-50 202.2 220 56.4
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 4.0e-50 202.2 211 55.5
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 4.0e-50 202.2 166 63.9
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 1.2e-49 200.7 212 54.2
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.2e-49 200.7 193 57.0
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 1.2e-49 200.7 217 56.2
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 1.2e-49 200.7 200 58.0
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 3.4e-49 199.1 215 54.4
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 5.8e-49 198.4 206 57.3
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 7.5e-49 198.0 206 54.4
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 7.5e-49 198.0 202 56.4
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 9.8e-49 197.6 192 59.9
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 1.3e-48 197.2 225 49.8
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 1.7e-48 196.8 209 56.5
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.7e-48 196.8 176 65.9
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 2.9e-48 196.1 210 51.0
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 3.7e-48 195.7 214 52.3
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 6.4e-48 194.9 186 55.4
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 1.1e-47 194.1 205 52.2
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.9e-47 193.4 195 55.9
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 3.2e-47 192.6 211 54.0
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 5.4e-47 191.8 211 53.1
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 9.2e-47 191.0 194 55.2
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 9.2e-47 191.0 213 54.9
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 6.0e-46 188.3 214 50.9
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 1.0e-45 187.6 206 51.5
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 1.3e-45 187.2 228 49.1
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 1.7e-45 186.8 153 63.4
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 2.3e-45 186.4 209 55.5
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.9e-44 183.3 160 61.2
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 2.8e-43 179.5 205 52.7
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 3.6e-43 179.1 207 51.2
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 1.2e-41 174.1 133 68.4
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 1.2e-41 174.1 211 46.4
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 9.8e-41 171.0 186 56.5
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 8.3e-40 167.9 208 47.6
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 2.1e-38 163.3 167 50.3
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 2.1e-38 163.3 217 48.8
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 1.0e-37 161.0 208 43.3
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 3.0e-37 159.5 175 49.1
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 2.5e-36 156.4 186 43.0
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 3.6e-35 152.5 181 45.3
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 6.2e-35 151.8 203 42.9
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 2.3e-34 149.8 128 59.4
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 2.3e-34 149.8 146 52.7
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 3.1e-34 149.4 212 45.3
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 9.9e-33 144.4 185 43.8
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 1.1e-31 141.0 138 55.8
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 1.9e-31 140.2 192 40.6
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 1.9e-31 140.2 223 39.0
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 1.2e-30 137.5 110 58.2
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 7.8e-30 134.8 186 40.3
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 3.9e-29 132.5 213 40.8
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 5.1e-29 132.1 118 61.9
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 2.8e-27 126.3 144 48.6
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 4.7e-27 125.6 179 44.1
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 8.1e-27 124.8 137 43.1
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 3.1e-26 122.9 188 35.1
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 2.6e-25 119.8 131 49.6
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 9.9e-25 117.9 137 44.5
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 1.4e-23 114.0 171 39.8
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 4.2e-23 112.5 92 52.2
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 2.1e-22 110.2 98 59.2
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 8.7e-21 104.8 121 51.2
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 8.7e-21 104.8 132 40.2
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 1.5e-20 104.0 191 37.7
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 1.9e-20 103.6 90 53.3
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 2.5e-20 103.2 92 48.9
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 7.3e-20 101.7 121 50.4
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 5.8e-17 92.0 172 36.0
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 7.6e-17 91.7 86 47.7
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.3e-16 90.9 164 34.1
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 2.2e-16 90.1 133 36.8
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 1.4e-15 87.4 111 39.6
C06p21580 Brassica napus HOM05D004429 ORTHO05D021447 7.1e-15 85.1 72 68.1
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 3.9e-13 79.3 115 46.1
BolC6t37347H Brassica oleracea HOM05D004429 ORTHO05D021447 5.1e-13 79.0 71 66.2
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 4.8e-11 72.4 112 45.5
AT4G18692 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 6.9e-10 68.6 62 64.5
AT3G53342 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 2.0e-09 67.0 62 62.9
SGA_v2.0_scaffold32G13323 Striga asiatica HOM05D004429 ORTHO05D005583 4.5e-09 65.9 103 42.7
SGA_v2.0_scaffold61G21134 Striga asiatica HOM05D004429 ORTHO05D005583 7.6e-09 65.1 83 47.0
C03p31080 Brassica napus HOM05D004429 ORTHO05D103234 1.3e-08 64.3 55 69.1
AT1G55710 Arabidopsis thaliana HOM05D004429 ORTHO05D021447 1.1e-07 61.2 62 59.7


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