Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p28550 Brassica napus HOM05D000548 ORTHO05D097995 6.2e-41 170.2 79 100.0
BcaC09g48790 Brassica carinata HOM05D000548 ORTHO05D001552 4.6e-20 100.9 121 47.9
C01p45880 Brassica napus HOM05D000548 ORTHO05D001552 4.6e-20 100.9 121 47.9
BolC1t04550H Brassica oleracea HOM05D000548 ORTHO05D001552 4.6e-20 100.9 121 47.9
BcaB04g20777 Brassica carinata HOM05D000548 ORTHO05D001552 1.3e-19 99.4 121 47.1
A01p36030 Brassica napus HOM05D000548 ORTHO05D001552 3.0e-19 98.2 121 46.3
BraA01t03682Z Brassica rapa HOM05D000548 ORTHO05D001552 3.0e-19 98.2 121 46.3
Sp3g16420 Schrenkiella parvula HOM05D000548 ORTHO05D001552 4.3e-18 94.4 121 45.5
Carub.0003s1807 Capsella rubella HOM05D000548 ORTHO05D001552 4.8e-17 90.9 121 43.8
Thhalv10019915m.g Eutrema salsugineum HOM05D000548 ORTHO05D001552 1.4e-16 89.4 121 43.8
AL3G31530 Arabidopsis lyrata HOM05D000548 ORTHO05D001552 9.0e-16 86.7 121 41.3
C05p47660 Brassica napus HOM05D000548 ORTHO05D001552 1.5e-15 85.9 121 42.1
BolC5t33474H Brassica oleracea HOM05D000548 ORTHO05D001552 1.5e-15 85.9 121 42.1
BraA05t21974Z Brassica rapa HOM05D000548 ORTHO05D001552 1.5e-15 85.9 121 42.1
CARHR093650 Cardamine hirsuta HOM05D000548 ORTHO05D001552 2.0e-15 85.5 121 43.0
A05p31360 Brassica napus HOM05D000548 ORTHO05D001552 5.8e-15 84.0 121 41.3
AT3G18290 Arabidopsis thaliana HOM05D000548 ORTHO05D001552 7.6e-15 83.6 121 41.3
BcaC05g28617 Brassica carinata HOM05D000548 ORTHO05D001552 8.4e-14 80.1 47 76.6
C05p47250 Brassica napus HOM05D005862 ORTHO05D007731 8.4e-14 80.1 47 76.6
BolC5t33451H Brassica oleracea HOM05D005862 ORTHO05D007731 8.4e-14 80.1 47 76.6
Aa31LG8G5150 Aethionema arabicum HOM05D000548 ORTHO05D001552 1.6e-12 75.9 112 41.1
THA.LOC104809834 Tarenaya hassleriana HOM05D000548 ORTHO05D001552 4.3e-10 67.8 118 36.4
Potri.010G122200 Populus trichocarpa HOM05D000548 ORTHO05D001552 9.0e-08 60.1 46 52.2
Sabra10G0092300 Salix brachista HOM05D000548 ORTHO05D001552 9.0e-08 60.1 46 52.2
Actinidia02462 Actinidia chinensis HOM05D000548 ORTHO05D001552 1.5e-07 59.3 43 60.5
Manes.06G065800 Manihot esculenta HOM05D000548 ORTHO05D001552 2.0e-07 58.9 118 29.7
Actinidia02673 Actinidia chinensis HOM05D000548 ORTHO05D011935 2.6e-07 58.5 43 60.5
Sabra08G0093600 Salix brachista HOM05D000548 ORTHO05D001552 3.4e-07 58.2 46 54.3
Potri.008G123300 Populus trichocarpa HOM05D000548 ORTHO05D001552 9.9e-07 56.6 46 52.2
Sabra12G0038800 Salix brachista HOM05D000548 ORTHO05D001552 2.2e-06 55.5 47 53.2
Potri.012G055100 Populus trichocarpa HOM05D000548 ORTHO05D001552 2.9e-06 55.1 47 53.2
Duzib248G0424 Durio zibethinus HOM05D000548 ORTHO05D001552 3.8e-06 54.7 47 53.2


User provided reference genes

Program Settings