Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p28220 Brassica napus HOM05D005185 ORTHO05D006075 9.7e-109 396.7 189 100.0
C06p20860 Brassica napus HOM05D005185 ORTHO05D006075 3.2e-35 152.5 102 75.5
BolC6t37273H Brassica oleracea HOM05D005185 ORTHO05D006075 3.2e-35 152.5 102 75.5
Sp5g09390 Schrenkiella parvula HOM05D005185 ORTHO05D006075 5.1e-33 145.2 324 37.3
C04p40000 Brassica napus HOM05D005185 ORTHO05D006075 2.5e-32 142.9 324 36.1
BcaC02g09201 Brassica carinata HOM05D005185 ORTHO05D006075 4.8e-31 138.7 324 35.5
Thhalv10010464m.g Eutrema salsugineum HOM05D005185 ORTHO05D006075 6.2e-31 138.3 324 36.7
BcaC08g44614 Brassica carinata HOM05D005185 ORTHO05D006075 3.1e-30 136.0 102 71.6
A07p21330 Brassica napus HOM05D005185 ORTHO05D006075 3.1e-30 136.0 102 71.6
A04p06560 Brassica napus HOM05D005185 ORTHO05D006075 4.0e-30 135.6 102 71.6
AL5G33730 Arabidopsis lyrata HOM05D005185 ORTHO05D006075 6.9e-30 134.8 324 35.5
CARHR162820 Cardamine hirsuta HOM05D005185 ORTHO05D006075 1.5e-29 133.7 324 35.8
AT3G52940 Arabidopsis thaliana HOM05D005185 ORTHO05D006075 3.4e-29 132.5 102 70.6
Carub.0005s1942 Capsella rubella HOM05D005185 ORTHO05D006075 3.8e-28 129.0 103 69.9
THA.LOC104805104 Tarenaya hassleriana HOM05D005185 ORTHO05D006075 6.4e-28 128.3 103 67.0
Aa31LG10G8140 Aethionema arabicum HOM05D005185 ORTHO05D006075 2.4e-27 126.3 305 36.1
Lj5g0000259 Lotus japonicus HOM05D005185 ORTHO05D006075 7.1e-27 124.8 102 65.7
Phvul.007G223700 Phaseolus vulgaris HOM05D005185 ORTHO05D006075 2.7e-26 122.9 102 65.7
TPR.G5654 Trifolium pratense HOM05D005185 ORTHO05D006075 4.6e-26 122.1 102 64.7
Glyma.13G150900 Glycine max HOM05D005185 ORTHO05D006075 1.8e-25 120.2 102 64.7
VMungo0720G0877 Vigna mungo HOM05D005185 ORTHO05D006075 1.8e-25 120.2 102 63.7
Medtr1g061240 Medicago truncatula HOM05D005185 ORTHO05D006075 3.0e-25 119.4 102 63.7
Rhsim03G0081600 Rhododendron simsii HOM05D005185 ORTHO05D006075 3.0e-25 119.4 117 56.4
Ca_11622_v3 Cicer arietinum L. HOM05D005185 ORTHO05D006075 5.1e-25 118.6 102 63.7
CANSAT80G0751 Cannabis sativa HOM05D005185 ORTHO05D006075 6.7e-25 118.2 102 60.8
Lalb_Chr02g0155121 Lupinus albus HOM05D005185 ORTHO05D006075 6.7e-25 118.2 102 63.7
Peaxi162Scf00433g00811 Petunia axillaris HOM05D005185 ORTHO05D006075 6.7e-25 118.2 88 64.8
Solyc09g009040.3 Solanum lycopersicum HOM05D005185 ORTHO05D006075 6.7e-25 118.2 103 61.2
arahy.Tifrunner.gnm1.ann1.56JAE5 Arachis hypogaea HOM05D005185 ORTHO05D006075 8.7e-25 117.9 102 61.8
AUR62041416 Chenopodium quinoa HOM05D005185 ORTHO05D006075 8.7e-25 117.9 102 60.8
arahy.Tifrunner.gnm1.ann1.86F40W Arachis hypogaea HOM05D005185 ORTHO05D006075 1.9e-24 116.7 102 61.8
AUR62033583 Chenopodium quinoa HOM05D005185 ORTHO05D006075 1.9e-24 116.7 102 59.8
Ciclev10012005m.g Citrus clementina HOM05D005185 ORTHO05D006075 1.9e-24 116.7 103 59.2
Sopen09g003770 Solanum pennellii HOM05D005185 ORTHO05D006075 1.9e-24 116.7 103 60.2
Nn2g13992 Nelumbo nucifera HOM05D005185 ORTHO05D006075 2.5e-24 116.3 102 62.7
Potri.006G116200 Populus trichocarpa HOM05D005185 ORTHO05D006075 2.5e-24 116.3 102 61.8
PGSC0003DMG400002720 Solanum tuberosum HOM05D005185 ORTHO05D006075 2.5e-24 116.3 103 60.2
arahy.Tifrunner.gnm1.ann1.81LQDK Arachis hypogaea HOM05D005185 ORTHO05D006075 3.3e-24 115.9 102 61.8
arahy.Tifrunner.gnm1.ann1.C1A3DY Arachis hypogaea HOM05D005185 ORTHO05D006075 3.3e-24 115.9 102 61.8
Manes.09G060500 Manihot esculenta HOM05D005185 ORTHO05D006075 3.3e-24 115.9 102 61.8
QL07p040641 Quercus lobata HOM05D005185 ORTHO05D006075 3.3e-24 115.9 102 58.8
TWI77G0453 Tripterygium wilfordii HOM05D005185 ORTHO05D006075 3.3e-24 115.9 102 60.8
GSVIVG01033776001 Vitis vinifera HOM05D005185 ORTHO05D006075 3.3e-24 115.9 102 61.8
EL10Ac7g16996 Beta vulgaris HOM05D005185 ORTHO05D006075 4.3e-24 115.5 102 60.8
Cpa.g.sc599.2 Carica papaya HOM05D005185 ORTHO05D006075 4.3e-24 115.5 102 62.7
CiPaw.09G008300 Carya illinoinensis HOM05D005185 ORTHO05D006075 4.3e-24 115.5 102 60.8
arahy.Tifrunner.gnm1.ann1.TDW0BY Arachis hypogaea HOM05D005185 ORTHO05D006075 5.6e-24 115.2 96 62.5
Hma1.2p1_0611F.1_g188600 Hydrangea macrophylla HOM05D005185 ORTHO05D006075 5.6e-24 115.2 102 59.8
Hma1.2p1_0611F.1_g188610 Hydrangea macrophylla HOM05D005185 ORTHO05D006075 5.6e-24 115.2 102 59.8
Hma1.2p1_0651F.1_g195823 Hydrangea macrophylla HOM05D005185 ORTHO05D006075 5.6e-24 115.2 102 59.8
Hma1.2p1_0651F.1_g195826 Hydrangea macrophylla HOM05D005185 ORTHO05D006075 5.6e-24 115.2 102 59.8
Nitab4.5_0010922g0020 Nicotiana tabacum HOM05D005185 ORTHO05D006075 5.6e-24 115.2 107 57.9
PGR004G1028 Punica granatum HOM05D005185 ORTHO05D006075 5.6e-24 115.2 102 60.8
COL.COLO4_29821 Corchorus olitorius HOM05D005185 ORTHO05D006075 7.4e-24 114.8 115 57.4
Dinv19825 Davidia involucrata HOM05D005185 ORTHO05D006075 7.4e-24 114.8 102 59.8
FvH4_6g17830 Fragaria vesca HOM05D005185 ORTHO05D006075 9.6e-24 114.4 102 58.8
Thecc.05G080500 Theobroma cacao HOM05D005185 ORTHO05D006075 9.6e-24 114.4 102 61.8
Cfa016531 Carpinus fangiana HOM05D005185 ORTHO05D006075 1.6e-23 113.6 102 60.8
Gohir.A01G209400 Gossypium hirsutum HOM05D005185 ORTHO05D006075 2.1e-23 113.2 102 61.8
Gorai.002G242700 Gossypium raimondii HOM05D005185 ORTHO05D006075 2.1e-23 113.2 102 61.8
TAR623G0074 Trochodendron aralioides HOM05D005185 ORTHO05D006075 2.1e-23 113.2 102 59.8
Duzib093G0601 Durio zibethinus HOM05D005185 ORTHO05D006075 2.8e-23 112.8 102 60.8
RcHm_v2.0_Chr3g0472081 Rosa chinensis HOM05D005185 ORTHO05D006075 2.8e-23 112.8 102 57.8
TWI53G0558 Tripterygium wilfordii HOM05D005185 ORTHO05D006075 2.8e-23 112.8 102 60.8
CSS0036820 Camellia sinensis var. sinensis HOM05D005185 ORTHO05D006075 3.7e-23 112.5 102 58.8
MD12G1017500 Malus domestica HOM05D005185 ORTHO05D006075 3.7e-23 112.5 102 61.8
vmacro07366 Vaccinium macrocarpon HOM05D005185 ORTHO05D006075 3.7e-23 112.5 134 48.5
Dinv21262 Davidia involucrata HOM05D005185 ORTHO05D006075 4.8e-23 112.1 102 58.8
Prupe.7G118200 Prunus persica HOM05D005185 ORTHO05D006075 4.8e-23 112.1 102 59.8
Gohir.D01G198500 Gossypium hirsutum HOM05D005185 ORTHO05D006075 6.2e-23 111.7 102 60.8
Atru.chr8.940 Acer truncatum HOM05D005185 ORTHO05D006075 8.1e-23 111.3 102 59.8
MSTRG.19227 Avicennia marina HOM05D005185 ORTHO05D006075 8.1e-23 111.3 102 57.8
Sabra06G0090800 Salix brachista HOM05D005185 ORTHO05D006075 8.1e-23 111.3 92 63.0
Glyma.10G065702 Glycine max HOM05D005185 ORTHO05D006075 1.1e-22 110.9 102 61.8
HanXRQChr02g0052331 Helianthus annuus HOM05D005185 ORTHO05D006075 1.1e-22 110.9 102 60.8
Eucgr.E00489 Eucalyptus grandis HOM05D005185 ORTHO05D006075 1.4e-22 110.5 102 58.8
MBI17_g11100_MAGBIO Magnolia biondii HOM05D005185 ORTHO05D006075 1.4e-22 110.5 111 56.8
SGA_v2.0_scaffold75G24798 Striga asiatica HOM05D005185 ORTHO05D006075 1.4e-22 110.5 102 59.8
MD14G1015200 Malus domestica HOM05D005185 ORTHO05D006075 1.8e-22 110.2 102 59.8
Prupe.8G104900 Prunus persica HOM05D005185 ORTHO05D006075 1.8e-22 110.2 102 58.8
Cc06_g05220 Coffea canephora HOM05D005185 ORTHO05D006075 2.4e-22 109.8 101 57.4
CsaV3_3G036770 Cucumis sativus L. HOM05D005185 ORTHO05D006075 3.1e-22 109.4 102 60.8
Aqoxy1G00943 Aquilegia oxysepala HOM05D005185 ORTHO05D006075 4.0e-22 109.0 102 58.8
ECA233G3076 Erigeron canadensis HOM05D005185 ORTHO05D006075 5.3e-22 108.6 102 58.8
FAN02G1941 Fragaria x ananassa HOM05D005185 ORTHO05D006075 5.3e-22 108.6 92 57.6
FAN05G4391 Fragaria x ananassa HOM05D005185 ORTHO05D006075 5.3e-22 108.6 92 58.7
FAN09G3384 Fragaria x ananassa HOM05D005185 ORTHO05D006075 5.3e-22 108.6 92 58.7
FAN14G0962 Fragaria x ananassa HOM05D005185 ORTHO05D006075 5.3e-22 108.6 92 58.7
CDE02G3234 Ceratophyllum demersum HOM05D005185 ORTHO05D006075 9.0e-22 107.8 103 57.3
ClCG10G019410 Citrullus lanatus HOM05D005185 ORTHO05D006075 9.0e-22 107.8 102 59.8
Migut.J00988 Erythranthe guttata HOM05D005185 ORTHO05D006075 9.0e-22 107.8 102 58.8
Os09g0565600 Oryza sativa ssp. japonica HOM05D005185 ORTHO05D006075 9.0e-22 107.8 103 56.3
Sed0010777 Sechium edule HOM05D005185 ORTHO05D006075 9.0e-22 107.8 102 59.8
BolC4t25573H Brassica oleracea HOM05D005185 ORTHO05D006075 1.2e-21 107.5 322 31.7
BraA07t29820Z Brassica rapa HOM05D005185 ORTHO05D006075 1.2e-21 107.5 102 60.8
MELO3C009431.2 Cucumis melo HOM05D005185 ORTHO05D006075 1.2e-21 107.5 102 58.8
SalBow6G2903 Salvia bowleyana HOM05D005185 ORTHO05D006075 1.2e-21 107.5 104 54.8
BraA04t16360Z Brassica rapa HOM05D005185 ORTHO05D006075 1.5e-21 107.1 322 32.0
Nitab4.5_0001922g0020 Nicotiana tabacum HOM05D005185 ORTHO05D006075 1.5e-21 107.1 128 48.4
Duzib128G1524 Durio zibethinus HOM05D005185 ORTHO05D006075 2.0e-21 106.7 117 55.6
Eucgr.A01551 Eucalyptus grandis HOM05D005185 ORTHO05D006075 2.0e-21 106.7 100 59.0
SMO146G0185 Selaginella moellendorffii HOM05D005185 ORTHO05D006075 3.4e-21 105.9 103 56.3
Zm00001eb109520 Zea mays HOM05D005185 ORTHO05D006075 4.5e-21 105.5 103 55.3
ATR0820G212 Amborella trichopoda HOM05D005185 ORTHO05D006075 7.6e-21 104.8 99 55.6
SalBow8G3620 Salvia bowleyana HOM05D005185 ORTHO05D006075 7.6e-21 104.8 100 56.0
PSO339G1354 Papaver somniferum HOM05D005185 ORTHO05D006075 4.9e-20 102.1 102 56.9
Sc02g0001150 Simmondsia chinensis HOM05D005185 ORTHO05D006075 3.2e-19 99.4 100 56.0
Atru.chr8.1640 Acer truncatum HOM05D005185 ORTHO05D006075 4.2e-19 99.0 91 57.1
Haze_19532 Corylus avellana HOM05D005185 ORTHO05D006075 4.2e-19 99.0 117 47.9
Os01g0354200 Oryza sativa ssp. japonica HOM05D005185 ORTHO05D006075 7.1e-19 98.2 101 52.5
Mapoly0024s0127 Marchantia polymorpha HOM05D005185 ORTHO05D006075 8.7e-17 91.3 102 52.0
FAN05G2920 Fragaria x ananassa HOM05D005185 ORTHO05D006075 1.1e-16 90.9 92 54.3
Thecc.08G186700 Theobroma cacao HOM05D005185 ORTHO05D006075 7.4e-16 88.2 92 48.9
Pp3c16_12420 Physcomitrium patens HOM05D005185 ORTHO05D006075 1.3e-15 87.4 102 47.1
Psat6g078920 Pisum sativum HOM05D005185 ORTHO05D006075 2.8e-15 86.3 66 68.2
AagrBONN_evm.TU.Sc2ySwM_228.4043 Anthoceros agrestis HOM05D005185 ORTHO05D006075 3.7e-15 85.9 103 48.5
CSS0010850 Camellia sinensis var. sinensis HOM05D005185 ORTHO05D006075 6.2e-15 85.1 117 44.4
Duzib116G0400 Durio zibethinus HOM05D005185 ORTHO05D006075 6.2e-15 85.1 92 48.9
arahy.Tifrunner.gnm1.ann1.A5J8ZR Arachis hypogaea HOM05D005185 ORTHO05D006075 3.1e-14 82.8 66 63.6
CBR_g23124 Chara braunii HOM05D005185 ORTHO05D006075 4.0e-14 82.4 106 43.4
Lj1C1155T7 Lonicera japonica HOM05D005185 ORTHO05D006075 4.5e-13 79.0 97 48.5
Lsat_1_v5_gn_2_16021 Lactuca sativa HOM05D005185 ORTHO05D006075 7.6e-13 78.2 75 60.0
Hund03537 Selenicereus undatus HOM05D005185 ORTHO05D006075 3.8e-12 75.9 61 60.7
Oeu022320.1 Olea europaea HOM05D005185 ORTHO05D006075 8.4e-12 74.7 66 57.6
DCAR_013955 Daucus carota HOM05D005185 ORTHO05D006075 2.5e-11 73.2 61 60.7
PSO063G2742 Papaver somniferum HOM05D005185 ORTHO05D006075 7.9e-10 68.2 90 45.6
HPP92_002061 Vanilla planifolia HOM05D005185 ORTHO05D006075 7.9e-10 68.2 75 48.0
unitig_27.g25398 Utricularia gibba HOM05D005185 ORTHO05D006075 1.3e-09 67.4 66 57.6
Actinidia11332 Actinidia chinensis HOM05D005185 ORTHO05D006075 8.2e-07 58.2 65 49.2


User provided reference genes

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