Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 3.7e-100 368.2 187 100.0
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 3.7e-100 368.2 187 100.0
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 1.1e-88 330.1 187 90.4
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 1.9e-88 329.3 187 90.9
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 7.4e-85 317.4 189 87.3
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 5.9e-74 281.2 187 79.7
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 8.5e-73 277.3 185 79.5
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 8.5e-73 277.3 187 79.7
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 7.2e-72 274.2 187 79.1
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 1.2e-71 273.5 182 81.3
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 1.2e-71 273.5 182 81.3
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 2.7e-71 272.3 186 79.0
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 7.9e-71 270.8 182 81.3
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 7.9e-71 270.8 182 81.3
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 1.1e-69 266.9 185 77.3
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 5.7e-61 238.0 146 87.0
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 5.9e-50 201.4 154 67.5
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 1.0e-49 200.7 154 66.9
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.2e-49 199.5 136 75.0
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 6.5e-49 198.0 135 74.8
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 8.5e-49 197.6 141 73.8
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 1.1e-48 197.2 134 71.6
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.5e-48 196.8 135 74.1
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 9.4e-48 194.1 185 58.4
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 1.6e-47 193.4 174 60.3
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 3.6e-47 192.2 130 76.2
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 4.7e-47 191.8 187 56.1
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 6.1e-47 191.4 183 57.4
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 6.1e-47 191.4 134 73.1
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 8.0e-47 191.0 130 75.4
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 1.0e-46 190.7 189 57.1
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 1.4e-46 190.3 144 67.4
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 1.4e-46 190.3 179 60.3
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 1.8e-46 189.9 137 70.8
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.3e-46 189.5 130 74.6
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 6.8e-46 188.0 195 55.4
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 6.8e-46 188.0 147 65.3
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 6.8e-46 188.0 136 71.3
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 8.8e-46 187.6 137 70.1
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 8.8e-46 187.6 129 72.9
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 8.8e-46 187.6 167 61.1
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 1.2e-45 187.2 160 61.2
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 1.2e-45 187.2 133 72.9
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.5e-45 186.8 133 72.2
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.6e-45 186.0 133 71.4
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 3.4e-45 185.7 166 61.4
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 5.7e-45 184.9 134 70.1
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 7.5e-45 184.5 140 66.4
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 1.3e-44 183.7 158 60.8
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 1.3e-44 183.7 136 70.6
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 1.3e-44 183.7 140 66.4
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 2.2e-44 183.0 195 55.9
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 6.3e-44 181.4 145 65.5
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 8.3e-44 181.0 145 66.2
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.1e-43 180.6 151 61.6
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 1.4e-43 180.3 128 71.1
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.4e-43 180.3 140 67.9
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 1.8e-43 179.9 141 66.7
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.4e-43 179.5 137 69.3
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.4e-43 179.5 137 67.9
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.4e-43 179.5 121 73.6
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 4.1e-43 178.7 134 67.9
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 5.4e-43 178.3 151 60.9
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 5.4e-43 178.3 134 68.7
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 9.1e-43 177.6 151 60.9
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 1.2e-42 177.2 138 67.4
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 1.2e-42 177.2 134 67.9
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 1.6e-42 176.8 132 67.4
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 1.6e-42 176.8 162 57.4
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 4.5e-42 175.3 140 65.7
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 7.7e-42 174.5 140 66.4
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 1.7e-41 173.3 162 56.8
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.7e-41 173.3 111 75.7
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 1.7e-41 173.3 111 75.7
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 2.9e-41 172.6 119 73.9
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.9e-41 172.6 183 55.7
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.9e-41 172.6 133 67.7
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.9e-41 172.6 133 67.7
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 6.6e-41 171.4 134 69.4
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 8.6e-41 171.0 134 69.4
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 1.5e-40 170.2 132 66.7
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.5e-40 169.5 183 55.2
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.5e-40 169.5 183 55.2
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 2.5e-40 169.5 143 60.8
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 3.3e-40 169.1 182 54.9
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 5.6e-40 168.3 149 63.1
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 5.6e-40 168.3 139 60.4
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 7.2e-40 167.9 144 61.1
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 7.2e-40 167.9 144 61.1
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 2.1e-39 166.4 135 63.0
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 4.7e-39 165.2 164 56.1
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 4.7e-39 165.2 168 54.8
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 1.4e-38 163.7 124 64.5
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 1.4e-38 163.7 124 64.5
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.4e-38 163.7 108 76.9
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 6.8e-38 161.4 127 65.4
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 6.8e-38 161.4 193 52.8
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 6.8e-38 161.4 121 67.8
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 8.9e-38 161.0 140 62.9
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 1.2e-37 160.6 140 62.9
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 1.8e-35 153.3 129 61.2
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.8e-35 153.3 116 71.6
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 5.4e-35 151.8 187 48.1
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 1.6e-34 150.2 158 57.6
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 1.6e-34 150.2 131 60.3
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 3.0e-33 146.0 166 51.8
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 6.6e-33 144.8 86 77.9
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 2.5e-32 142.9 96 75.0
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 2.8e-31 139.4 112 58.9
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 6.2e-31 138.3 115 64.3
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 8.0e-31 137.9 110 65.5
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 1.4e-30 137.1 112 59.8
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 3.1e-30 136.0 99 71.7
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 8.9e-30 134.4 112 65.2
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 1.3e-28 130.6 113 58.4
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 6.4e-28 128.3 124 50.8
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 3.0e-25 119.4 118 48.3
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 3.3e-24 115.9 128 56.2
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 3.3e-24 115.9 122 45.9
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 3.3e-16 89.4 122 40.2
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 4.0e-14 82.4 100 45.0
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 7.6e-13 78.2 76 51.3
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 5.6e-08 62.0 61 50.8
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 3.6e-07 59.3 81 45.7


User provided reference genes

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