Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p25550 Brassica napus HOM05D008738 ORTHO05D010755 1.5e-110 402.9 216 100.0
BcaC07g39511 Brassica carinata HOM05D008738 ORTHO05D010755 2.6e-105 385.6 216 95.4
BolC8t50176H Brassica oleracea HOM05D008738 ORTHO05D010755 2.9e-101 372.1 216 93.1
BraA09t39816Z Brassica rapa HOM05D008738 ORTHO05D010755 1.1e-97 360.1 217 90.3
A09p43510 Brassica napus HOM05D008738 ORTHO05D010755 1.1e-95 353.6 217 89.9
A09p43530 Brassica napus HOM05D008738 ORTHO05D010755 2.4e-95 352.4 216 89.8
BraA09t39817Z Brassica rapa HOM05D008738 ORTHO05D010755 3.8e-93 345.1 216 87.5
BraA09t39815Z Brassica rapa HOM05D008738 ORTHO05D010755 3.1e-87 325.5 219 83.6
A09p43500 Brassica napus HOM05D008738 ORTHO05D010755 4.1e-87 325.1 219 83.6
BcaC07g39509 Brassica carinata HOM05D008738 ORTHO05D010755 2.0e-86 322.8 219 82.6
BcaB01g00614 Brassica carinata HOM05D008738 ORTHO05D010755 8.5e-85 317.4 217 82.0
A09p43550 Brassica napus HOM05D008738 ORTHO05D010755 7.2e-84 314.3 216 81.0
BcaB01g00613 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-76 290.4 216 75.9
AT3G50470 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 3.5e-70 268.9 216 70.8
AL5G30620 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 2.3e-69 266.2 219 71.7
Carub.0005s1680 Capsella rubella HOM05D008738 ORTHO05D010755 4.3e-68 261.9 218 69.3
Thhalv10010714m.g Eutrema salsugineum HOM05D008738 ORTHO05D010755 4.4e-65 251.9 218 67.4
CARHR159990 Cardamine hirsuta HOM05D008738 ORTHO05D010755 2.7e-62 242.7 216 65.7
C08p25540 Brassica napus HOM05D008738 ORTHO05D010755 8.3e-56 221.1 154 81.8
AT3G50460 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 2.7e-54 216.1 215 60.0
BcaC06g33094 Brassica carinata HOM05D008738 ORTHO05D010755 1.0e-53 214.2 212 59.4
AL5G30610 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 3.0e-53 212.6 214 57.9
CARHR159980 Cardamine hirsuta HOM05D008738 ORTHO05D010755 3.0e-53 212.6 217 58.5
Carub.0005s1679 Capsella rubella HOM05D008738 ORTHO05D010755 3.9e-53 212.2 198 59.1
AL5G30600 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.9e-52 209.9 213 58.2
Aa31LG4G18690 Aethionema arabicum HOM05D008738 ORTHO05D010755 1.5e-49 200.3 217 53.9
A03p47800 Brassica napus HOM05D008738 ORTHO05D010755 9.9e-49 197.6 215 60.0
BraA03t13890Z Brassica rapa HOM05D008738 ORTHO05D010755 9.9e-49 197.6 215 60.0
AL5G30630 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.0e-45 187.6 215 55.8
AT3G50450 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.3e-45 187.2 216 51.4
Aa31LG4G18680 Aethionema arabicum HOM05D008738 ORTHO05D010755 8.4e-24 114.8 149 43.0
BcaB01g00612 Brassica carinata HOM05D008738 ORTHO05D010755 1.9e-20 103.6 143 46.2
BcaC06g33093 Brassica carinata HOM05D008738 ORTHO05D010755 2.6e-17 93.2 144 43.1
AT3G50480 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 2.8e-11 73.2 140 37.9
PSO210G7782 Papaver somniferum HOM05D000033 ORTHO05D030421 5.3e-10 68.9 171 25.7
C07p45760 Brassica napus HOM05D008738 ORTHO05D010755 6.9e-10 68.6 85 51.8
RcHm_v2.0_Chr1g0326431 Rosa chinensis HOM05D000529 ORTHO05D000472 3.8e-08 62.8 144 29.2
Cfa003965 Carpinus fangiana HOM05D008738 ORTHO05D010755 1.1e-07 61.2 135 24.4
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 1.1e-07 61.2 140 27.9
Dinv39897 Davidia involucrata HOM05D000529 ORTHO05D000472 1.4e-07 60.8 137 29.9
Prupe.7G140100 Prunus persica HOM05D008738 ORTHO05D010755 1.4e-07 60.8 171 29.2
MD02G1163800 Malus domestica HOM05D008738 ORTHO05D010755 7.2e-07 58.5 160 27.5
Nn5g29351 Nelumbo nucifera HOM05D000529 ORTHO05D000472 7.2e-07 58.5 136 26.5
Cc07_g05690 Coffea canephora HOM05D000529 ORTHO05D010311 1.6e-06 57.4 136 27.9
Manes.12G094400 Manihot esculenta HOM05D058365 ORTHO05D010755 2.7e-06 56.6 212 29.7
Haze_15456 Corylus avellana HOM05D008738 ORTHO05D010755 3.6e-06 56.2 132 23.5
Manes.12G094300 Manihot esculenta HOM05D058365 ORTHO05D010755 3.6e-06 56.2 203 27.6
Duzib147G1638 Durio zibethinus HOM05D000529 ORTHO05D000472 4.6e-06 55.8 147 27.2
Sabra07G0034600 Salix brachista HOM05D037871 ORTHO05D010755 4.6e-06 55.8 139 27.3
TWI09G1247 Tripterygium wilfordii HOM05D000529 ORTHO05D000472 6.1e-06 55.5 146 25.3


User provided reference genes

Program Settings