Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 1.1e-209 733.0 357 100.0
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 1.1e-209 733.0 357 100.0
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 4.3e-182 641.3 364 87.6
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 9.5e-174 613.6 367 86.1
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 6.4e-162 574.3 373 78.8
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 3.2e-161 572.0 373 78.6
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 1.1e-145 520.4 368 76.6
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 1.9e-113 413.3 383 58.5
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.4e-108 396.4 399 55.4
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 4.7e-104 382.1 393 53.7
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 7.5e-102 374.8 400 53.0
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 2.2e-101 373.2 385 53.5
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.0e-95 354.4 286 63.3
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.5e-89 334.0 358 49.7
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 1.7e-85 320.5 393 49.6
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 8.3e-85 318.2 282 64.2
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.7e-83 313.2 345 49.6
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 5.0e-82 308.9 391 47.3
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.5e-81 306.6 397 48.6
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 3.3e-81 306.2 182 86.3
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.4e-78 296.2 371 47.4
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.9e-77 293.1 351 47.6
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 9.2e-76 288.1 378 46.3
BcaB01g00618 Brassica carinata HOM05D007494 ORTHO05D009621 3.0e-74 283.1 246 66.3
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 2.1e-72 276.9 346 44.2
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 2.1e-72 276.9 346 44.2
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 4.0e-71 272.7 346 43.9
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 5.2e-71 272.3 346 43.1
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 1.4e-68 264.2 343 42.3
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.2e-68 263.1 369 46.3
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 4.1e-68 262.7 345 42.6
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 1.2e-67 261.2 345 42.3
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 9.9e-62 241.5 343 41.1
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.2e-61 240.4 401 40.6
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 2.9e-61 240.0 239 55.2
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.9e-61 239.2 400 41.2
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.9e-60 237.3 404 38.9
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.1e-59 233.8 397 39.3
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.1e-59 233.8 381 36.5
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 6.6e-58 228.8 374 39.6
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 8.6e-58 228.4 308 45.5
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 2.5e-57 226.9 235 53.2
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.1e-56 223.8 355 40.0
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 6.2e-56 222.2 317 44.5
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.2e-53 213.8 374 37.2
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 1.9e-52 210.7 383 39.4
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 7.1e-52 208.8 315 39.4
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 3.0e-50 203.4 365 40.3
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 3.9e-50 203.0 411 36.7
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 5.1e-50 202.6 364 40.4
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 8.6e-50 201.8 380 37.1
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 1.1e-49 201.4 377 37.1
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.5e-49 201.1 192 53.6
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.3e-49 199.9 377 37.7
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 3.6e-48 196.4 367 40.1
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 2.6e-46 190.3 394 36.3
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.4e-46 189.9 332 38.9
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 3.4e-46 189.9 358 38.5
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 1.7e-45 187.6 358 38.3
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.9e-45 186.8 290 39.7
BcaC07g39502 Brassica carinata HOM05D007494 ORTHO05D009621 3.8e-45 186.4 192 51.6
C08p25470 Brassica napus HOM05D007494 ORTHO05D009621 3.8e-45 186.4 192 51.6
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 1.9e-44 184.1 369 37.4
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 4.2e-44 183.0 395 34.2
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 6.0e-43 179.1 313 41.5
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 2.3e-42 177.2 374 36.4
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.5e-41 174.5 302 39.4
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.8e-40 170.2 395 32.7
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.8e-39 167.5 380 33.7
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 5.3e-39 166.0 344 34.0
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 1.5e-38 164.5 271 42.1
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 9.9e-38 161.8 252 44.0
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.9e-36 157.5 316 36.7
Aa31LG8G15370 Aethionema arabicum HOM05D007494 ORTHO05D009621 4.2e-36 156.4 328 36.0
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 5.4e-36 156.0 249 41.4
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 1.6e-35 154.5 337 36.5
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.5e-35 153.3 297 36.4
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.9e-34 149.8 215 42.8
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.9e-33 147.5 315 36.2
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 1.5e-30 137.9 267 36.7
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.6e-30 137.1 234 41.0
BcaC07g39503 Brassica carinata HOM05D007494 ORTHO05D032917 5.5e-28 129.4 96 67.7
C08p25480 Brassica napus HOM05D007494 ORTHO05D032917 5.5e-28 129.4 96 67.7
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 3.9e-26 123.2 201 41.8
BraA09t39808Z Brassica rapa HOM05D007494 ORTHO05D009621 1.9e-25 120.9 112 57.1
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 4.3e-25 119.8 181 41.4
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 1.4e-23 114.8 345 28.7
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 8.4e-21 105.5 177 40.1
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 6.0e-19 99.4 98 55.1
Aa31LG8G15340 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.8e-16 90.5 169 38.5
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.4e-14 83.6 78 55.1
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 1.3e-13 81.6 384 24.5
C08p21080 Brassica napus HOM05D007494 ORTHO05D009621 2.1e-11 74.3 119 42.0
Aa31LG8G15320 Aethionema arabicum HOM05D007494 ORTHO05D009621 4.6e-11 73.2 89 42.7
AL8G44280 Arabidopsis lyrata HOM05D000015 ORTHO05D000734 1.5e-09 68.2 82 46.3
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 7.4e-09 65.9 284 27.1
Thecc.08G063600 Theobroma cacao HOM05D007494 ORTHO05D009621 7.4e-09 65.9 101 36.6
Potri.005G254500 Populus trichocarpa HOM05D000664 ORTHO05D010866 2.8e-08 63.9 235 24.7
Peaxi162Scf00001g00056 Petunia axillaris HOM05D008697 ORTHO05D010866 4.8e-08 63.2 148 29.1
AL1G33800 Arabidopsis lyrata HOM05D013746 ORTHO05D015945 8.2e-08 62.4 75 48.0
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 1.4e-07 61.6 140 31.4
Potri.005G254633 Populus trichocarpa HOM05D000664 ORTHO05D010866 1.4e-07 61.6 236 24.6
Oeu008441.1 Olea europaea HOM05D008697 ORTHO05D010866 1.8e-07 61.2 137 32.8
Peaxi162Scf00251g00041 Petunia axillaris HOM05D008697 ORTHO05D010866 1.2e-06 58.5 148 26.4
BraA08t34812Z Brassica rapa HOM05D007494 ORTHO05D009621 1.5e-06 58.2 65 44.6
CAN.G1631.3 Capsicum annuum HOM05D008697 ORTHO05D010866 2.0e-06 57.8 226 24.8
CAN.G1909.14 Capsicum annuum HOM05D008697 ORTHO05D010866 3.4e-06 57.0 230 28.3
Cc04_g08540 Coffea canephora HOM05D002420 ORTHO05D002422 3.4e-06 57.0 235 25.1
Cpa.g.sc42.22 Carica papaya HOM05D002420 ORTHO05D002422 4.5e-06 56.6 149 29.5
AT1G20803 Arabidopsis thaliana HOM05D013746 ORTHO05D015945 7.7e-06 55.8 81 40.7


User provided reference genes

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