Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g39502 Brassica carinata HOM05D007494 ORTHO05D009621 1.9e-104 382.5 185 100.0
C08p25470 Brassica napus HOM05D007494 ORTHO05D009621 1.9e-104 382.5 185 100.0
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 6.6e-102 374.0 183 97.8
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 9.9e-82 307.0 184 81.0
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 5.3e-67 258.1 194 67.0
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 5.3e-67 258.1 194 67.0
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 9.0e-51 204.1 202 52.5
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.3e-49 200.3 196 53.1
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 3.6e-47 192.2 192 51.6
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 3.6e-47 192.2 192 51.6
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 6.1e-47 191.4 138 69.6
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 6.7e-46 188.0 192 50.5
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 6.3e-44 181.4 198 51.5
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.2e-42 177.2 193 50.3
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 2.0e-42 176.4 196 48.5
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 5.9e-42 174.9 196 48.5
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 1.3e-41 173.7 196 48.0
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.2e-40 169.1 204 49.5
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.0e-38 164.1 196 46.9
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.0e-38 162.5 195 48.2
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 5.1e-38 161.8 194 45.9
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 3.3e-37 159.1 197 46.2
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 7.4e-37 157.9 188 47.3
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 6.3e-36 154.8 193 46.6
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.9e-35 151.4 204 46.1
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 1.7e-33 146.7 192 42.2
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 1.7e-33 146.7 192 42.2
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 2.2e-33 146.4 192 42.2
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 2.5e-32 142.9 194 41.8
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 3.2e-32 142.5 191 41.9
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 5.5e-32 141.7 194 42.8
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 1.6e-31 140.2 193 42.0
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 2.7e-31 139.4 191 40.8
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 2.0e-29 133.3 193 41.5
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 3.3e-29 132.5 206 39.8
BraA09t39808Z Brassica rapa HOM05D007494 ORTHO05D009621 4.4e-29 132.1 89 73.0
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.3e-28 128.3 216 38.0
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.4e-27 127.1 200 40.0
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 2.4e-27 126.3 205 42.0
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 4.1e-27 125.6 205 42.0
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 5.3e-27 125.2 187 40.1
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 2.0e-26 123.2 205 40.5
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 2.6e-26 122.9 205 40.5
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 3.5e-26 122.5 205 40.0
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 4.5e-26 122.1 189 40.7
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.0e-25 120.9 212 36.3
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.0e-25 120.9 218 33.0
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.2e-25 119.8 208 38.5
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 3.8e-25 119.0 192 40.1
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 8.5e-25 117.9 202 37.6
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 1.1e-24 117.5 206 39.3
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 1.9e-24 116.7 208 39.4
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 3.2e-24 115.9 199 40.2
Aa31LG8G15370 Aethionema arabicum HOM05D007494 ORTHO05D009621 4.2e-24 115.5 197 40.1
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 7.2e-24 114.8 199 38.7
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 7.2e-24 114.8 198 38.4
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.7e-23 112.8 208 37.0
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.7e-23 112.8 208 35.6
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 1.4e-22 110.5 212 37.3
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 1.4e-22 110.5 185 38.4
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 8.8e-22 107.8 214 36.9
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 7.5e-21 104.8 200 35.5
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 1.7e-20 103.6 207 35.3
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.7e-20 103.6 169 41.4
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.1e-19 99.4 185 38.4
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.0e-18 96.7 197 33.5
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.5e-16 89.7 192 33.9
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 1.2e-13 80.9 127 35.4
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 3.4e-13 79.3 194 29.4
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.4e-13 79.0 88 53.4
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 3.7e-12 75.9 63 55.6
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 8.3e-12 74.7 87 43.7
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.4e-11 73.9 87 49.4
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.8e-11 73.6 103 38.8
Aa31LG8G15340 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.4e-11 73.2 143 37.8
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 7.0e-11 71.6 76 46.1
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 1.2e-10 70.9 201 27.4
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 5.0e-09 65.5 62 50.0
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 3.2e-08 62.8 194 28.4
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 4.2e-08 62.4 186 26.9
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.6e-07 59.3 50 54.0
Aqoxy1G03078 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.0e-06 56.2 187 25.1


User provided reference genes

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