Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 3.1e-226 788.1 388 100.0
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 2.2e-184 649.0 379 85.5
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 4.6e-182 641.3 377 85.1
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 6.7e-173 610.9 367 86.1
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 6.7e-173 610.9 367 86.1
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 1.4e-165 586.6 367 81.7
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 5.2e-157 558.1 365 80.5
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 4.1e-114 415.6 206 100.0
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 8.1e-110 401.4 396 56.6
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.1e-109 399.4 416 54.6
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 2.0e-100 370.2 408 51.7
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 7.1e-98 361.7 400 51.5
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 2.1e-97 360.1 290 64.8
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 4.6e-97 359.0 414 51.2
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.4e-90 337.4 361 49.9
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 2.5e-87 326.6 416 50.0
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.2e-83 313.5 391 48.3
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 1.0e-80 304.7 284 62.7
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.3e-80 304.3 405 48.1
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 9.6e-79 298.1 354 48.6
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.1e-78 297.0 354 48.3
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 6.9e-77 292.0 377 47.2
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 9.0e-77 291.6 384 46.1
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 1.2e-76 291.2 350 45.1
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 1.2e-76 291.2 350 45.1
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 2.2e-75 287.0 350 44.9
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 5.1e-72 275.8 350 43.1
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 1.9e-71 273.9 348 43.7
BcaB01g00618 Brassica carinata HOM05D007494 ORTHO05D009621 3.3e-71 273.1 252 63.1
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 5.7e-71 272.3 348 43.4
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.8e-70 269.2 367 48.2
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 1.0e-67 261.5 350 42.0
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 2.1e-65 253.8 350 41.4
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 9.7e-63 245.0 312 47.1
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.7e-62 244.2 410 40.2
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.7e-62 244.2 404 40.8
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.1e-61 241.5 410 39.3
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.5e-60 236.1 413 40.2
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 5.9e-60 235.7 313 45.7
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 1.0e-59 235.0 246 54.9
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.7e-57 226.9 380 39.7
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 6.1e-57 225.7 250 52.4
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 2.6e-55 220.3 323 40.6
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 5.7e-55 219.2 417 35.5
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.8e-53 214.2 375 38.9
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 5.3e-53 212.6 188 56.4
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.7e-51 207.6 363 39.4
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.2e-51 207.2 417 37.2
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 8.5e-51 205.3 418 38.0
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 4.2e-50 203.0 378 37.8
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 2.7e-49 200.3 381 37.8
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 2.7e-49 200.3 418 38.0
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 2.7e-49 200.3 390 39.0
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 8.8e-48 195.3 413 36.1
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 9.7e-47 191.8 339 39.2
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 9.7e-47 191.8 420 36.9
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 4.8e-46 189.5 409 36.2
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 5.3e-45 186.0 418 34.4
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.5e-44 183.3 303 39.3
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 4.5e-44 183.0 406 37.4
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 4.5e-44 183.0 401 36.7
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 4.5e-44 183.0 401 36.2
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 5.0e-43 179.5 320 40.9
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 8.5e-43 178.7 384 36.5
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.6e-41 173.3 256 45.3
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.8e-40 171.0 320 37.2
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 2.3e-40 170.6 279 43.4
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.6e-39 167.2 313 38.3
BcaC07g39502 Brassica carinata HOM05D007494 ORTHO05D009621 2.6e-39 167.2 196 48.0
C08p25470 Brassica napus HOM05D007494 ORTHO05D009621 2.6e-39 167.2 196 48.0
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.8e-37 161.0 339 33.0
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 7.0e-37 159.1 408 33.1
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 9.1e-37 158.7 401 32.2
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.2e-36 158.3 320 36.9
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 5.9e-36 156.0 231 42.9
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 5.9e-36 156.0 386 34.5
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.5e-34 150.6 310 35.5
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 4.7e-33 146.4 252 40.9
Aa31LG8G15370 Aethionema arabicum HOM05D007494 ORTHO05D009621 3.0e-32 143.7 339 34.8
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 4.4e-31 139.8 214 43.5
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 7.5e-31 139.0 240 41.7
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 2.8e-30 137.1 210 43.8
BraA09t39808Z Brassica rapa HOM05D007494 ORTHO05D009621 2.3e-24 117.5 116 56.0
BcaC07g39503 Brassica carinata HOM05D007494 ORTHO05D032917 5.7e-23 112.8 107 58.9
C08p25480 Brassica napus HOM05D007494 ORTHO05D032917 5.7e-23 112.8 107 58.9
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.9e-22 110.5 179 40.8
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 6.3e-22 109.4 181 39.2
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 7.8e-20 102.4 105 52.4
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 5.0e-19 99.8 351 27.4
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.4e-13 80.9 79 59.5
Aa31LG8G15340 Aethionema arabicum HOM05D007494 ORTHO05D009621 5.4e-13 79.7 166 38.0
C08p21080 Brassica napus HOM05D007494 ORTHO05D009621 1.9e-10 71.2 105 41.9
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 2.5e-10 70.9 420 23.6
AL8G44280 Arabidopsis lyrata HOM05D000015 ORTHO05D000734 2.1e-09 67.8 82 46.3
Potri.005G254500 Populus trichocarpa HOM05D000664 ORTHO05D010866 4.7e-09 66.6 366 23.5
Potri.005G254633 Populus trichocarpa HOM05D000664 ORTHO05D010866 1.4e-08 65.1 271 26.9
Thecc.08G063600 Theobroma cacao HOM05D007494 ORTHO05D009621 1.8e-08 64.7 101 36.6
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 4.0e-08 63.5 314 27.1
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 7.5e-07 59.3 318 26.4
BraA08t34812Z Brassica rapa HOM05D007494 ORTHO05D009621 2.9e-06 57.4 63 46.0
CAN.G1909.14 Capsicum annuum HOM05D008697 ORTHO05D010866 3.7e-06 57.0 211 27.5
Nitab4.5_0000430g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 6.4e-06 56.2 209 29.7


User provided reference genes

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