Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p24880 Brassica napus HOM05D001960 ORTHO05D004348 1.0e-22 109.0 49 100.0
BolC8t50104H Brassica oleracea HOM05D001960 ORTHO05D004348 2.6e-21 104.4 46 100.0
Aa31LG2G4500 Aethionema arabicum HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
AL5G18390 Arabidopsis lyrata HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
AL5G18410 Arabidopsis lyrata HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
AT3G28710 Arabidopsis thaliana HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
BcaB04g19480 Brassica carinata HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
BcaC04g23865 Brassica carinata HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
BcaC06g33635 Brassica carinata HOM05D001960 ORTHO05D008957 1.6e-15 85.1 40 95.0
A06p40400 Brassica napus HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
A09p03760 Brassica napus HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
C07p37650 Brassica napus HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
C09p03950 Brassica napus HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
BolC7t44281H Brassica oleracea HOM05D001960 ORTHO05D007725 1.6e-15 85.1 40 95.0
BolC9t53326H Brassica oleracea HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
BraA06t26958Z Brassica rapa HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
BraA09t36012Z Brassica rapa HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
Carub.0005s0724 Capsella rubella HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
Carub.0005s0725 Capsella rubella HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
CARHR151620 Cardamine hirsuta HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
CARHR151640 Cardamine hirsuta HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
Thhalv10004497m.g Eutrema salsugineum HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
Thhalv10004498m.g Eutrema salsugineum HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
Sp2g17353 Schrenkiella parvula HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
Sp2g17360 Schrenkiella parvula HOM05D001960 ORTHO05D004348 1.6e-15 85.1 40 95.0
AT3G28715 Arabidopsis thaliana HOM05D001960 ORTHO05D004348 6.2e-15 83.2 40 92.5
BcaB07g30124 Brassica carinata HOM05D001960 ORTHO05D004348 6.2e-15 83.2 40 92.5
BcaC03g17524 Brassica carinata HOM05D001960 ORTHO05D004348 6.2e-15 83.2 40 92.5
A02p36010 Brassica napus HOM05D001960 ORTHO05D004348 6.2e-15 83.2 40 92.5
C02p54850 Brassica napus HOM05D001960 ORTHO05D004348 6.2e-15 83.2 40 92.5
BolC2t11546H Brassica oleracea HOM05D001960 ORTHO05D004348 6.2e-15 83.2 40 92.5
BraA02t08600Z Brassica rapa HOM05D001960 ORTHO05D004348 6.2e-15 83.2 40 92.5
Aa31LG9G1760 Aethionema arabicum HOM05D001960 ORTHO05D004348 2.3e-14 81.3 40 90.0
Lalb_Chr02g0159521 Lupinus albus HOM05D001960 ORTHO05D004348 3.1e-14 80.9 40 90.0
Lalb_Chr02g0159571 Lupinus albus HOM05D001960 ORTHO05D004348 3.1e-14 80.9 40 90.0
Lalb_Chr21g0318931 Lupinus albus HOM05D001960 ORTHO05D004348 3.1e-14 80.9 40 90.0
arahy.Tifrunner.gnm1.ann1.EZF2RR Arachis hypogaea HOM05D001960 ORTHO05D004348 6.8e-14 79.7 40 87.5
arahy.Tifrunner.gnm1.ann1.M50Q99 Arachis hypogaea HOM05D001960 ORTHO05D004348 6.8e-14 79.7 40 87.5
Lj1g0025494 Lotus japonicus HOM05D001960 ORTHO05D004348 6.8e-14 79.7 40 87.5
Glyma.09G240300 Glycine max HOM05D001960 ORTHO05D004348 8.9e-14 79.3 40 87.5
Glyma.18G256200 Glycine max HOM05D001960 ORTHO05D004348 8.9e-14 79.3 40 87.5
VMungo1383G3104 Vigna mungo HOM05D001960 ORTHO05D004348 8.9e-14 79.3 40 87.5
THA.LOC104805447 Tarenaya hassleriana HOM05D001960 ORTHO05D004348 1.2e-13 79.0 40 87.5
THA.LOC104823931 Tarenaya hassleriana HOM05D001960 ORTHO05D004348 1.2e-13 79.0 40 87.5
QL02p080802 Quercus lobata HOM05D001960 ORTHO05D004348 1.5e-13 78.6 40 85.0
Cfa007519 Carpinus fangiana HOM05D001960 ORTHO05D004348 2.0e-13 78.2 40 85.0
Ca_04106_v3 Cicer arietinum L. HOM05D001960 ORTHO05D004348 2.0e-13 78.2 40 85.0
Ca_04115_v3 Cicer arietinum L. HOM05D001960 ORTHO05D004348 2.0e-13 78.2 40 85.0
Haze_14570 Corylus avellana HOM05D001960 ORTHO05D004348 2.0e-13 78.2 40 85.0
Medtr7g009590 Medicago truncatula HOM05D001960 ORTHO05D004348 2.0e-13 78.2 40 85.0
Phvul.008G043300 Phaseolus vulgaris HOM05D001960 ORTHO05D004348 2.0e-13 78.2 40 85.0
CANSAT11G2018 Cannabis sativa HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Cpa.g.sc14.35 Carica papaya HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
CiPaw.03G029300 Carya illinoinensis HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
CiPaw.04G019300 Carya illinoinensis HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
ClCG10G014880 Citrullus lanatus HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
COL.COLO4_25163 Corchorus olitorius HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
MELO3C009887.2 Cucumis melo HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
CsaV3_3G041630 Cucumis sativus L. HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Duzib147G0831 Durio zibethinus HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Duzib187G1412 Durio zibethinus HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Gohir.A07G215700 Gossypium hirsutum HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Gohir.A09G022100 Gossypium hirsutum HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Gohir.D07G222700 Gossypium hirsutum HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Gohir.D09G021300 Gossypium hirsutum HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Gorai.001G257000 Gossypium raimondii HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Gorai.006G025300 Gossypium raimondii HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Lj2A726T8 Lonicera japonica HOM05D001960 ORTHO05D004348 3.4e-13 77.4 42 81.0
Prupe.3G271000 Prunus persica HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
PGR142G1484 Punica granatum HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
RcHm_v2.0_Chr2g0169031 Rosa chinensis HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Sed0008481 Sechium edule HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Thecc.04G075700 Theobroma cacao HOM05D001960 ORTHO05D004348 3.4e-13 77.4 40 85.0
Migut.K01329 Erythranthe guttata HOM05D001960 ORTHO05D004348 4.4e-13 77.0 40 82.5
Psat3g196680 Pisum sativum HOM05D001960 ORTHO05D004348 4.4e-13 77.0 40 82.5
Aqoxy3G03291 Aquilegia oxysepala HOM05D001960 ORTHO05D004348 5.8e-13 76.6 40 82.5
ECA246G2943 Erigeron canadensis HOM05D001960 ORTHO05D004348 5.8e-13 76.6 40 82.5
Nitab4.5_0000098g0050 Nicotiana tabacum HOM05D001960 ORTHO05D004348 5.8e-13 76.6 40 82.5
Nitab4.5_0013371g0010 Nicotiana tabacum HOM05D001960 ORTHO05D004348 5.8e-13 76.6 40 82.5
vmacro10254 Vaccinium macrocarpon HOM05D001960 ORTHO05D004348 5.8e-13 76.6 41 80.5
CAN.G128.149 Capsicum annuum HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
DCAR_011153 Daucus carota HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
DCAR_011154 Daucus carota HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
Dinv33731 Davidia involucrata HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
FvH4_6g49160 Fragaria vesca HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
FAN05G5323 Fragaria x ananassa HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
FAN09G1760 Fragaria x ananassa HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
FAN09G2614 Fragaria x ananassa HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
FAN14G2932 Fragaria x ananassa HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
HanXRQChr15g0474171 Helianthus annuus HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
Hma1.2p1_0449F.1_g155170 Hydrangea macrophylla HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
MD09G1048000 Malus domestica HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
MD17G1048200 Malus domestica HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
Manes.17G022500 Manihot esculenta HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
Manes.17G022600 Manihot esculenta HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
PSO017G2769 Papaver somniferum HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
PSO478G2180 Papaver somniferum HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
Peaxi162Scf00163g00105 Petunia axillaris HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
Solyc10g081530.2 Solanum lycopersicum HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
Sopen10g032040 Solanum pennellii HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
PGSC0003DMG400028218 Solanum tuberosum HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
TAR374G0426 Trochodendron aralioides HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
TAR629G1922 Trochodendron aralioides HOM05D001960 ORTHO05D004348 7.5e-13 76.3 40 82.5
Migut.H00896 Erythranthe guttata HOM05D001960 ORTHO05D004348 9.8e-13 75.9 40 82.5
Lsat_1_v5_gn_2_88741 Lactuca sativa HOM05D001960 ORTHO05D004348 9.8e-13 75.9 40 82.5
Peaxi162Scf00061g02912 Petunia axillaris HOM05D001960 ORTHO05D004348 9.8e-13 75.9 40 82.5
EL10Ac2g02943 Beta vulgaris HOM05D001960 ORTHO05D004348 1.3e-12 75.5 40 82.5
AUR62031635 Chenopodium quinoa HOM05D001960 ORTHO05D004348 1.3e-12 75.5 40 82.5
AUR62038866 Chenopodium quinoa HOM05D001960 ORTHO05D004348 1.3e-12 75.5 40 82.5
Ciclev10012084m.g Citrus clementina HOM05D001960 ORTHO05D004348 1.7e-12 75.1 40 82.5
Eucgr.I01925 Eucalyptus grandis HOM05D001960 ORTHO05D004348 1.7e-12 75.1 40 82.5
HanXRQChr17g0547421 Helianthus annuus HOM05D001960 ORTHO05D004348 1.7e-12 75.1 40 80.0
Lsat_1_v5_gn_3_102160 Lactuca sativa HOM05D001960 ORTHO05D004348 1.7e-12 75.1 40 80.0
Potri.017G079200 Populus trichocarpa HOM05D001960 ORTHO05D004348 1.7e-12 75.1 40 80.0
Sabra17G0070400 Salix brachista HOM05D001960 ORTHO05D004348 1.7e-12 75.1 40 80.0
Sed0005459 Sechium edule HOM05D001960 ORTHO05D004348 1.7e-12 75.1 40 82.5
Hma1.2p1_0423F.1_g150240 Hydrangea macrophylla HOM05D001960 ORTHO05D004348 2.2e-12 74.7 40 80.0
Nitab4.5_0000387g0100 Nicotiana tabacum HOM05D001960 ORTHO05D004348 2.2e-12 74.7 40 80.0
Nitab4.5_0002087g0050 Nicotiana tabacum HOM05D001960 ORTHO05D004348 2.2e-12 74.7 40 80.0
Rhsim09G0146500 Rhododendron simsii HOM05D001960 ORTHO05D004348 2.2e-12 74.7 42 76.2
Os01g0587000 Oryza sativa ssp. japonica HOM05D001960 ORTHO05D004348 2.9e-12 74.3 40 77.5
SHI04268 Sapria himalayana HOM05D001960 ORTHO05D004348 2.9e-12 74.3 40 80.0
Hund13234 Selenicereus undatus HOM05D001960 ORTHO05D004348 2.9e-12 74.3 40 82.5
Sc02g0007720 Simmondsia chinensis HOM05D001960 ORTHO05D004348 2.9e-12 74.3 40 77.5
TPR.G4258 Trifolium pratense HOM05D001960 ORTHO05D004348 2.9e-12 74.3 36 88.9
Atru.chr8.2689 Acer truncatum HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
ATR0706G077 Amborella trichopoda HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
MSTRG.15485 Avicennia marina HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
CSS0024221 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
CSS0026364 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
SalBow1G4343 Salvia bowleyana HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
SGA_v2.0_scaffold236G43786 Striga asiatica HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
SGA_v2.0_scaffold30G12526 Striga asiatica HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
TWI32G1350 Tripterygium wilfordii HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
TWI60G1096 Tripterygium wilfordii HOM05D001960 ORTHO05D004348 3.7e-12 73.9 40 80.0
Ah.10g031310 Amaranthus hybridus HOM05D001960 ORTHO05D004348 6.4e-12 73.2 40 80.0
Ah.12g065390 Amaranthus hybridus HOM05D001960 ORTHO05D004348 6.4e-12 73.2 40 80.0
Oeu060924.1 Olea europaea HOM05D001960 ORTHO05D004348 6.4e-12 73.2 40 77.5
Actinidia34797 Actinidia chinensis HOM05D001960 ORTHO05D004348 8.3e-12 72.8 40 77.5
Actinidia38882 Actinidia chinensis HOM05D001960 ORTHO05D004348 8.3e-12 72.8 40 77.5
CSS0022239 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 8.3e-12 72.8 40 77.5
Manes.17G022700 Manihot esculenta HOM05D001960 ORTHO05D004348 8.3e-12 72.8 40 80.0
Nn1g04484 Nelumbo nucifera HOM05D001960 ORTHO05D004348 8.3e-12 72.8 40 77.5
Oeu050223.1 Olea europaea HOM05D001960 ORTHO05D004348 8.3e-12 72.8 40 77.5
unitig_748.g8436 Utricularia gibba HOM05D001960 ORTHO05D004348 1.1e-11 72.4 40 77.5
HPP92_006462 Vanilla planifolia HOM05D001960 ORTHO05D004348 1.1e-11 72.4 40 77.5
Zm00001eb160620 Zea mays HOM05D001960 ORTHO05D004348 1.1e-11 72.4 40 77.5
MSTRG.3317 Avicennia marina HOM05D001960 ORTHO05D004348 1.4e-11 72.0 40 77.5
CSS0002033 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 1.4e-11 72.0 40 77.5
CDE04G1714 Ceratophyllum demersum HOM05D001960 ORTHO05D004348 1.4e-11 72.0 40 80.0
RcHm_v2.0_Chr4g0431361 Rosa chinensis HOM05D001960 ORTHO05D004348 1.4e-11 72.0 42 78.6
CDE06G0436 Ceratophyllum demersum HOM05D001960 ORTHO05D004348 2.4e-11 71.2 40 77.5
Mapoly0140s0023 Marchantia polymorpha HOM05D001960 ORTHO05D004348 3.2e-11 70.9 40 77.5
Mapoly0006s0177 Marchantia polymorpha HOM05D001960 ORTHO05D004348 4.1e-11 70.5 40 75.0
Pp3c20_18840 Physcomitrium patens HOM05D001960 ORTHO05D004348 7.0e-11 69.7 40 75.0
RcHm_v2.0_Chr6g0297701 Rosa chinensis HOM05D001960 ORTHO05D004348 9.2e-11 69.3 40 75.0
SMO137G0011 Selaginella moellendorffii HOM05D001960 ORTHO05D004348 9.2e-11 69.3 40 77.5
AagrBONN_evm.TU.Sc2ySwM_340.257 Anthoceros agrestis HOM05D001960 ORTHO05D004348 3.5e-10 67.4 40 70.0
Dinv40238 Davidia involucrata HOM05D001960 ORTHO05D004348 3.5e-10 67.4 39 74.4
CBR_g20991 Chara braunii HOM05D001960 ORTHO05D004348 4.6e-10 67.0 40 70.0
CBR_g20375 Chara braunii HOM05D001960 ORTHO05D004348 1.0e-09 65.9 40 67.5
Cre03.g176250 Chlamydomonas reinhardtii HOM05D001960 ORTHO05D004348 8.6e-09 62.8 42 64.3
PRCOL_00003698 Prasinoderma coloniale HOM05D001960 ORTHO05D004348 2.1e-07 58.2 40 62.5
CSS0019148 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 1.1e-06 55.8 30 80.0


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