Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p22350 Brassica napus HOM05D000960 ORTHO05D000683 6.0e-78 294.3 168 100.0
A08p27860 Brassica napus HOM05D000960 ORTHO05D000683 1.4e-55 219.9 180 78.3
BraA08t34718Z Brassica rapa HOM05D000960 ORTHO05D000683 9.4e-55 217.2 185 75.7
BolC8t49875H Brassica oleracea HOM05D000960 ORTHO05D000683 9.7e-44 180.6 119 87.4
BcaC07g39235 Brassica carinata HOM05D000960 ORTHO05D027170 3.5e-41 172.2 214 60.3
BcaB07g32403 Brassica carinata HOM05D000960 ORTHO05D000683 3.6e-38 162.2 199 60.3
Sp1g21510 Schrenkiella parvula HOM05D000960 ORTHO05D000683 4.0e-37 158.7 201 58.2
Thhalv10007419m.g Eutrema salsugineum HOM05D000960 ORTHO05D000683 1.1e-36 157.1 195 61.5
BcaB03g14118 Brassica carinata HOM05D000960 ORTHO05D000683 8.2e-35 151.0 188 58.0
BcaC06g35082 Brassica carinata HOM05D000960 ORTHO05D000683 8.2e-35 151.0 188 58.0
A09p40720 Brassica napus HOM05D000960 ORTHO05D000683 1.8e-34 149.8 196 58.2
BraA09t39566Z Brassica rapa HOM05D000960 ORTHO05D000683 2.4e-34 149.4 196 58.2
BcaC05g26318 Brassica carinata HOM05D000960 ORTHO05D000683 5.3e-34 148.3 197 57.4
BolC5t31032H Brassica oleracea HOM05D000960 ORTHO05D000683 5.3e-34 148.3 197 57.4
AL1G37990 Arabidopsis lyrata HOM05D000960 ORTHO05D000683 2.7e-33 146.0 196 55.6
AT1G24160 Arabidopsis thaliana HOM05D000960 ORTHO05D000683 3.5e-33 145.6 195 55.4
C05p23320 Brassica napus HOM05D000960 ORTHO05D000683 1.7e-32 143.3 197 56.3
C08p22340 Brassica napus HOM05D000960 ORTHO05D000683 1.1e-31 140.6 175 60.6
Carub.0001s2365 Capsella rubella HOM05D000960 ORTHO05D000683 1.1e-31 140.6 201 52.7
CARHR024540 Cardamine hirsuta HOM05D000960 ORTHO05D000683 1.1e-31 140.6 198 56.6
Aa31LG7G7930 Aethionema arabicum HOM05D000960 ORTHO05D000683 3.2e-31 139.0 172 61.0
THA.LOC104822064 Tarenaya hassleriana HOM05D000960 ORTHO05D000683 2.5e-23 112.8 197 51.8
THA.LOC104822949 Tarenaya hassleriana HOM05D000960 ORTHO05D000683 2.0e-20 103.2 185 51.9
A07p36580 Brassica napus HOM05D000960 ORTHO05D000683 1.8e-18 96.7 177 45.8
BraA07t31224Z Brassica rapa HOM05D000960 ORTHO05D000683 1.8e-18 96.7 177 45.8
BolC6t39471H Brassica oleracea HOM05D000960 ORTHO05D000683 1.6e-17 93.6 169 47.9
BolC7t42525H Brassica oleracea HOM05D000960 ORTHO05D000683 2.9e-16 89.4 127 52.0
BolC8t49877H Brassica oleracea HOM05D047870 ORTHO05D040379 3.6e-14 82.4 150 50.7
Sp5g25220 Schrenkiella parvula HOM05D000960 ORTHO05D000683 3.6e-14 82.4 85 61.2
AT1G70100 Arabidopsis thaliana HOM05D000960 ORTHO05D000683 8.0e-14 81.3 198 41.4
C06p43980 Brassica napus HOM05D000960 ORTHO05D000683 1.0e-13 80.9 178 42.7
VMungo1215G3280 Vigna mungo HOM05D000960 ORTHO05D000683 1.2e-12 77.4 197 38.6
C08p22320 Brassica napus HOM05D000960 ORTHO05D000683 1.5e-12 77.0 93 60.2
Lalb_Chr09g0326561 Lupinus albus HOM05D000960 ORTHO05D000683 2.6e-12 76.3 190 38.4
QL03p067374 Quercus lobata HOM05D000960 ORTHO05D000683 4.4e-12 75.5 214 37.4
Atru.chr11.1931 Acer truncatum HOM05D000960 ORTHO05D000683 7.5e-12 74.7 164 39.0
Carub.0002s1677 Capsella rubella HOM05D000960 ORTHO05D000683 1.3e-11 73.9 194 40.7
Ca_24168_v3 Cicer arietinum L. HOM05D000960 ORTHO05D000683 2.2e-11 73.2 157 36.9
Thhalv10018633m.g Eutrema salsugineum HOM05D000960 ORTHO05D000683 2.2e-11 73.2 100 50.0
Cpa.g.sc5.326 Carica papaya HOM05D000960 ORTHO05D000683 2.9e-11 72.8 205 39.0
Phvul.003G056200 Phaseolus vulgaris HOM05D000960 ORTHO05D000683 3.7e-11 72.4 195 37.4
AL2G29350 Arabidopsis lyrata HOM05D000960 ORTHO05D000683 6.4e-11 71.6 174 39.7
GSVIVG01020143001 Vitis vinifera HOM05D000960 ORTHO05D000683 8.3e-11 71.2 222 36.0
EL10Ac6g13105 Beta vulgaris HOM05D000960 ORTHO05D000683 1.1e-10 70.9 129 43.4
Ciclev10031371m.g Citrus clementina HOM05D000960 ORTHO05D000683 4.1e-10 68.9 183 35.5
arahy.Tifrunner.gnm1.ann1.RCW3IX Arachis hypogaea HOM05D000960 ORTHO05D000683 1.2e-09 67.4 161 37.3
Gohir.D02G167000 Gossypium hirsutum HOM05D000960 ORTHO05D000683 1.6e-09 67.0 185 34.6
Gohir.A03G143900 Gossypium hirsutum HOM05D000960 ORTHO05D000683 3.5e-09 65.9 185 35.1
Sabra08G0146300 Salix brachista HOM05D000960 ORTHO05D000683 3.5e-09 65.9 207 34.3
arahy.Tifrunner.gnm1.ann1.25IG2V Arachis hypogaea HOM05D000960 ORTHO05D000683 4.6e-09 65.5 154 37.0
Haze_12120 Corylus avellana HOM05D000960 ORTHO05D000683 1.0e-08 64.3 140 37.9
MSTRG.643 Avicennia marina HOM05D000960 ORTHO05D000683 1.3e-08 63.9 159 39.0
Glyma.01G037700 Glycine max HOM05D000960 ORTHO05D000683 1.7e-08 63.5 202 35.1
Glyma.02G027100 Glycine max HOM05D000960 ORTHO05D000683 1.7e-08 63.5 195 33.8
Gorai.005G187400 Gossypium raimondii HOM05D000960 ORTHO05D000683 1.7e-08 63.5 176 36.9
Potri.008G192800 Populus trichocarpa HOM05D000960 ORTHO05D000683 1.7e-08 63.5 205 33.2
Sc04g0008700 Simmondsia chinensis HOM05D000960 ORTHO05D000683 1.7e-08 63.5 156 36.5
Thecc.02G239300 Theobroma cacao HOM05D000960 ORTHO05D000683 1.7e-08 63.5 182 36.3
Phvul.002G077200 Phaseolus vulgaris HOM05D000960 ORTHO05D000683 2.3e-08 63.2 204 35.8
VMungo0251G0151 Vigna mungo HOM05D000960 ORTHO05D000683 2.3e-08 63.2 202 35.6
Lj6A799T77 Lonicera japonica HOM05D000960 ORTHO05D000683 3.0e-08 62.8 55 58.2
Sed0020261 Sechium edule HOM05D000960 ORTHO05D000683 3.0e-08 62.8 142 40.8
arahy.Tifrunner.gnm1.ann1.SSVW3N Arachis hypogaea HOM05D000960 ORTHO05D000683 3.9e-08 62.4 209 34.0
CiPaw.06G076600 Carya illinoinensis HOM05D000960 ORTHO05D000683 3.9e-08 62.4 183 36.1
SalBow2G0989 Salvia bowleyana HOM05D000960 ORTHO05D000683 3.9e-08 62.4 161 39.8
Dinv31129 Davidia involucrata HOM05D000960 ORTHO05D000683 5.0e-08 62.0 160 36.9
Migut.L01382 Erythranthe guttata HOM05D000960 ORTHO05D000683 8.6e-08 61.2 171 36.8
CsaV3_5G031970 Cucumis sativus L. HOM05D000960 ORTHO05D000683 1.1e-07 60.8 180 35.6
SalBow2G1351 Salvia bowleyana HOM05D000960 ORTHO05D000683 1.5e-07 60.5 161 39.1
arahy.Tifrunner.gnm1.ann1.34UDDJ Arachis hypogaea HOM05D000960 ORTHO05D000683 1.9e-07 60.1 204 33.3
A08p27880 Brassica napus HOM05D000960 ORTHO05D027313 1.9e-07 60.1 146 44.5
BraA08t34720Z Brassica rapa HOM05D001714 ORTHO05D027313 1.9e-07 60.1 146 44.5
MELO3C012033.2 Cucumis melo HOM05D000960 ORTHO05D000683 2.5e-07 59.7 139 37.4
Actinidia14992 Actinidia chinensis HOM05D000960 ORTHO05D000683 3.3e-07 59.3 169 36.7
C08p22380 Brassica napus HOM05D047870 ORTHO05D040379 3.3e-07 59.3 129 45.0
PSO832G4139 Papaver somniferum HOM05D000960 ORTHO05D000683 3.3e-07 59.3 156 39.7
COL.COLO4_36280 Corchorus olitorius HOM05D000960 ORTHO05D000683 4.3e-07 58.9 142 38.0
TPR.G17333 Trifolium pratense HOM05D000960 ORTHO05D000683 5.6e-07 58.5 146 39.7
Dinv24919 Davidia involucrata HOM05D000960 ORTHO05D000683 7.3e-07 58.2 166 34.9
Duzib248G0907 Durio zibethinus HOM05D000960 ORTHO05D000683 7.3e-07 58.2 165 35.8
FvH4_4g35241 Fragaria vesca HOM05D000960 ORTHO05D000683 7.3e-07 58.2 154 37.0
FAN12G2309 Fragaria x ananassa HOM05D000960 ORTHO05D000683 7.3e-07 58.2 154 37.0
Duzib268G1671 Durio zibethinus HOM05D000960 ORTHO05D000683 9.5e-07 57.8 145 39.3
Medtr5g036560 Medicago truncatula HOM05D000960 ORTHO05D000683 9.5e-07 57.8 163 35.6
CSS0029704 Camellia sinensis var. sinensis HOM05D000960 ORTHO05D000683 1.2e-06 57.4 124 37.9
Prupe.1G261800 Prunus persica HOM05D000960 ORTHO05D000683 1.2e-06 57.4 163 37.4
PGSC0003DMG401001926 Solanum tuberosum HOM05D000960 ORTHO05D000683 1.6e-06 57.0 48 70.8
Sc11g0001530 Simmondsia chinensis HOM05D000960 ORTHO05D000683 2.1e-06 56.6 106 45.3
Glyma.14G139300 Glycine max HOM05D000960 ORTHO05D000683 2.8e-06 56.2 126 40.5
SGA_v2.0_scaffold166G38322 Striga asiatica HOM05D000960 ORTHO05D000683 3.6e-06 55.8 119 40.3
Cc11_g14030 Coffea canephora HOM05D000960 ORTHO05D000683 4.7e-06 55.5 170 35.3
Glyma.08G292700 Glycine max HOM05D000960 ORTHO05D000683 4.7e-06 55.5 143 36.4
Lj2g0010544 Lotus japonicus HOM05D000960 ORTHO05D000683 4.7e-06 55.5 111 40.5
PGR119G2016 Punica granatum HOM05D000960 ORTHO05D000683 4.7e-06 55.5 194 33.5
Ah.02g131740 Amaranthus hybridus HOM05D000960 ORTHO05D000683 6.2e-06 55.1 97 46.4
PSO013G0009 Papaver somniferum HOM05D000960 ORTHO05D000683 8.0e-06 54.7 152 36.8


User provided reference genes

Program Settings