Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p22000 Brassica napus HOM05D000689 ORTHO05D041792 6.6e-125 450.7 220 100.0
BolC8t49840H Brassica oleracea HOM05D000689 ORTHO05D041792 4.4e-105 384.8 234 85.9
Thhalv10025404m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.8e-22 109.8 245 38.4
AL7G25770 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.4e-21 107.5 247 37.2
Thhalv10013291m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 5.2e-21 105.5 255 37.6
AT4G27050 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.4e-20 102.4 254 34.6
Thhalv10025182m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.2e-19 100.1 249 35.7
Carub.0006s0530 Capsella rubella HOM05D000689 ORTHO05D000015 2.9e-19 99.8 245 35.1
AL6G23340 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.7e-19 99.4 259 36.3
BcaC09g51335 Brassica carinata HOM05D000689 ORTHO05D000015 3.2e-18 96.3 265 34.0
BcaC09g51338 Brassica carinata HOM05D000689 ORTHO05D000015 3.2e-18 96.3 265 34.0
A01p12240 Brassica napus HOM05D000689 ORTHO05D000015 4.1e-18 95.9 271 33.9
BraA01t01165Z Brassica rapa HOM05D000689 ORTHO05D000015 9.2e-18 94.7 248 34.7
BcaNung01794 Brassica carinata HOM05D000689 ORTHO05D000015 4.6e-17 92.4 269 33.5
BcaNung02239 Brassica carinata HOM05D000689 ORTHO05D000015 4.6e-17 92.4 263 36.1
BcaC09g51340 Brassica carinata HOM05D000689 ORTHO05D000015 5.9e-17 92.0 251 32.7
Thhalv10026785m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.3e-16 90.1 243 34.6
AT1G64540 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.9e-16 89.4 210 34.8
BolC8t47432H Brassica oleracea HOM05D000689 ORTHO05D000015 3.9e-16 89.4 223 38.6
Carub.0001s3702 Capsella rubella HOM05D000689 ORTHO05D000015 5.0e-16 89.0 250 34.0
BcaB06g28159 Brassica carinata HOM05D000689 ORTHO05D000015 6.6e-16 88.6 223 32.7
BcaC04g18680 Brassica carinata HOM05D000689 ORTHO05D000015 6.6e-16 88.6 241 36.5
Carub.0007s3428 Capsella rubella HOM05D000689 ORTHO05D000015 6.6e-16 88.6 234 34.6
BolC1t03135H Brassica oleracea HOM05D000689 ORTHO05D000015 8.6e-16 88.2 242 32.6
C01p32180 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-15 87.4 239 33.1
CARHR038000 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.5e-15 87.4 222 34.2
BcaB05g24984 Brassica carinata HOM05D000689 ORTHO05D000015 1.9e-15 87.0 235 33.2
C08p05810 Brassica napus HOM05D000689 ORTHO05D000015 1.9e-15 87.0 251 38.6
AL1G54370 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.3e-15 86.3 255 33.7
C07p05870 Brassica napus HOM05D000689 ORTHO05D000015 3.3e-15 86.3 235 33.6
BolC1t01378H Brassica oleracea HOM05D000689 ORTHO05D000015 3.3e-15 86.3 271 32.5
BolC7t40991H Brassica oleracea HOM05D000689 ORTHO05D000015 3.3e-15 86.3 235 33.6
AL1G25030 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 4.3e-15 85.9 248 36.7
A08p05370 Brassica napus HOM05D000689 ORTHO05D000015 4.3e-15 85.9 251 38.2
BraA08t32542Z Brassica rapa HOM05D000689 ORTHO05D000015 4.3e-15 85.9 251 38.2
BraA01t01243Z Brassica rapa HOM05D000689 ORTHO05D000015 7.3e-15 85.1 266 33.8
BolC8t47424H Brassica oleracea HOM05D000689 ORTHO05D000015 9.5e-15 84.7 252 38.9
AT5G35995 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.2e-14 84.3 247 32.4
BraA05t20468Z Brassica rapa HOM05D000689 ORTHO05D000015 1.6e-14 84.0 248 34.7
Thhalv10016490m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.6e-14 84.0 256 33.6
AL1G25040 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.1e-14 83.6 250 36.4
AT1G48400 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.1e-14 83.6 246 33.7
BcaC09g51333 Brassica carinata HOM05D000689 ORTHO05D000015 4.7e-14 82.4 255 32.5
A10p21080 Brassica napus HOM05D000689 ORTHO05D000015 4.7e-14 82.4 255 34.5
BolC2t09386H Brassica oleracea HOM05D000689 ORTHO05D000015 4.7e-14 82.4 243 33.7
BraA10t44173Z Brassica rapa HOM05D000689 ORTHO05D000015 4.7e-14 82.4 255 34.5
A04p21060 Brassica napus HOM05D000689 ORTHO05D000015 6.2e-14 82.0 253 32.0
BraA04t17675Z Brassica rapa HOM05D000689 ORTHO05D000015 6.2e-14 82.0 253 32.0
BraA09t38386Z Brassica rapa HOM05D000689 ORTHO05D000015 6.2e-14 82.0 243 33.7
BcaC04g18682 Brassica carinata HOM05D000689 ORTHO05D000015 8.0e-14 81.6 257 35.4
BcaNung04095 Brassica carinata HOM05D000689 ORTHO05D000015 8.0e-14 81.6 248 35.1
A03p19160 Brassica napus HOM05D000689 ORTHO05D000015 8.0e-14 81.6 243 33.7
BolC9t58682H Brassica oleracea HOM05D000689 ORTHO05D000015 8.0e-14 81.6 257 35.4
CARHR123070 Cardamine hirsuta HOM05D000689 ORTHO05D000015 8.0e-14 81.6 216 32.9
BcaB01g06363 Brassica carinata HOM05D000689 ORTHO05D000015 1.0e-13 81.3 249 30.9
BolC9t58670H Brassica oleracea HOM05D000689 ORTHO05D000015 1.0e-13 81.3 257 35.8
CARHR270010 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.4e-13 80.9 239 32.6
BraA05t19060Z Brassica rapa HOM05D000689 ORTHO05D000015 3.1e-13 79.7 267 29.6
AL5G23270 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 4.0e-13 79.3 238 32.4
AT2G29930 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 5.2e-13 79.0 247 34.0
AT2G29910 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 6.8e-13 78.6 247 31.6
BcaC01g05007 Brassica carinata HOM05D000689 ORTHO05D000015 6.8e-13 78.6 254 33.1
C09p58050 Brassica napus HOM05D000689 ORTHO05D000015 6.8e-13 78.6 257 35.8
C03p31190 Brassica napus HOM05D000689 ORTHO05D000015 8.9e-13 78.2 254 33.1
BraA02t07091Z Brassica rapa HOM05D000689 ORTHO05D000015 8.9e-13 78.2 243 32.1
BcaC02g08237 Brassica carinata HOM05D000689 ORTHO05D000015 1.5e-12 77.4 220 31.8
C04p56880 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-12 77.4 220 31.8
BolC4t27222H Brassica oleracea HOM05D000689 ORTHO05D000015 1.5e-12 77.4 220 31.8
Carub.0007s3560 Capsella rubella HOM05D000689 ORTHO05D000015 2.0e-12 77.0 224 32.6
CARHR123150 Cardamine hirsuta HOM05D000689 ORTHO05D000015 2.6e-12 76.6 249 33.7
Sp4g12490 Schrenkiella parvula HOM05D000689 ORTHO05D000015 2.6e-12 76.6 89 52.8
A05p00630 Brassica napus HOM05D000689 ORTHO05D000015 3.4e-12 76.3 267 29.2
BolC3t15465H Brassica oleracea HOM05D000689 ORTHO05D000015 4.4e-12 75.9 254 32.7
AL1G53180 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.8e-12 75.5 243 32.9
AL6G16510 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.8e-12 75.5 112 47.3
BcaC06g36282 Brassica carinata HOM05D000689 ORTHO05D000015 5.8e-12 75.5 216 32.9
BraA02t07095Z Brassica rapa HOM05D000689 ORTHO05D000015 7.5e-12 75.1 243 32.1
Carub.0004s1100 Capsella rubella HOM05D000689 ORTHO05D000015 7.5e-12 75.1 198 31.8
BcaC06g31360 Brassica carinata HOM05D000689 ORTHO05D000015 9.8e-12 74.7 257 31.9
BraA10t44873Z Brassica rapa HOM05D000689 ORTHO05D000015 9.8e-12 74.7 242 33.5
AL1G55020 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.3e-11 74.3 228 34.2
AL5G23260 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.9e-11 73.2 236 30.1
AT3G44810 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.9e-11 73.2 241 30.3
AT1G21990 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.7e-11 72.8 243 33.3
C04p00680 Brassica napus HOM05D000689 ORTHO05D000015 4.9e-11 72.4 259 30.1
BolC4t27399H Brassica oleracea HOM05D000689 ORTHO05D000015 4.9e-11 72.4 128 47.7
BcaB06g28328 Brassica carinata HOM05D000689 ORTHO05D000015 6.4e-11 72.0 252 31.7
BcaB03g15811 Brassica carinata HOM05D000689 ORTHO05D000015 2.4e-10 70.1 224 29.5
CARHR215660 Cardamine hirsuta HOM05D000689 ORTHO05D000015 2.4e-10 70.1 253 29.6
BraA02t07087Z Brassica rapa HOM05D000689 ORTHO05D000015 3.2e-10 69.7 217 31.3
Thhalv10022030m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 3.2e-10 69.7 238 28.2
AT1G48390 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.1e-10 69.3 233 33.0
BcaB01g03146 Brassica carinata HOM05D000689 ORTHO05D000015 4.1e-10 69.3 256 30.5
C02p33100 Brassica napus HOM05D000689 ORTHO05D000015 4.1e-10 69.3 217 31.8
BolC4t21701H Brassica oleracea HOM05D000689 ORTHO05D000015 5.4e-10 68.9 267 28.1
A10p28240 Brassica napus HOM05D000689 ORTHO05D000015 7.0e-10 68.6 257 33.1
AL7G46170 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.6e-09 67.4 245 31.0
C08p05790 Brassica napus HOM05D000689 ORTHO05D000015 1.6e-09 67.4 125 45.6
BolC8t51929H Brassica oleracea HOM05D000689 ORTHO05D027882 1.6e-09 67.4 45 77.8
Thhalv10028052m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.6e-09 67.4 239 31.0
C05p39730 Brassica napus HOM05D000689 ORTHO05D032523 2.0e-09 67.0 82 51.2
BolC5t32715H Brassica oleracea HOM05D000689 ORTHO05D032523 2.0e-09 67.0 82 51.2
A02p20610 Brassica napus HOM05D000689 ORTHO05D000015 2.7e-09 66.6 217 31.3
AT4G14096 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.6e-09 65.9 225 28.9
CARHR169630 Cardamine hirsuta HOM05D000689 ORTHO05D000015 6.0e-09 65.5 205 30.7
AL4G24660 Arabidopsis lyrata HOM05D000689 ORTHO05D013451 7.8e-09 65.1 102 41.2
Carub.0005s1509 Capsella rubella HOM05D000689 ORTHO05D000015 7.8e-09 65.1 234 29.9
BraA04t17807Z Brassica rapa HOM05D000689 ORTHO05D000015 1.3e-08 64.3 126 42.1
Carub.0007s3763 Capsella rubella HOM05D000689 ORTHO05D000015 1.3e-08 64.3 260 28.8
A09p51370 Brassica napus HOM05D000689 ORTHO05D000015 1.7e-08 63.9 245 28.6
BraA09t40578Z Brassica rapa HOM05D000689 ORTHO05D000015 1.7e-08 63.9 245 28.6
A04p22620 Brassica napus HOM05D000689 ORTHO05D000015 2.3e-08 63.5 245 31.0
AL5G40690 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.9e-08 62.8 180 32.8
AT5G38396 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.9e-08 62.8 247 30.0
AL5G41630 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 6.6e-08 62.0 240 29.2
C03p93310 Brassica napus HOM05D000689 ORTHO05D028066 6.6e-08 62.0 212 33.0
AT4G14103 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.1e-07 61.2 231 26.8
BcaC02g08067 Brassica carinata HOM05D000689 ORTHO05D000015 1.9e-07 60.5 111 46.8
CARHR169570 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.9e-07 60.5 245 28.2
BraA04t17808Z Brassica rapa HOM05D000689 ORTHO05D000015 2.5e-07 60.1 86 52.3
Thhalv10005932m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 3.3e-07 59.7 228 28.1
C01p14120 Brassica napus HOM05D000689 ORTHO05D000015 4.3e-07 59.3 222 30.6
Carub.0005s1055 Capsella rubella HOM05D000689 ORTHO05D000015 4.3e-07 59.3 113 38.9
AL5G41650 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.2e-06 57.8 245 29.0
BcaC05g27966 Brassica carinata HOM05D000689 ORTHO05D032523 1.2e-06 57.8 82 47.6
A08p00190 Brassica napus HOM05D000689 ORTHO05D028066 1.6e-06 57.4 214 30.8
BraA08t32076Z Brassica rapa HOM05D000689 ORTHO05D028066 1.6e-06 57.4 214 30.8
AT3G58860 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.1e-06 57.0 229 31.9
BcaB07g30958 Brassica carinata HOM05D000689 ORTHO05D000015 2.8e-06 56.6 230 27.4
BcaC07g40230 Brassica carinata HOM05D000689 ORTHO05D000015 2.8e-06 56.6 242 28.1
BraA06t26311Z Brassica rapa HOM05D000689 ORTHO05D000015 2.8e-06 56.6 147 34.0
AT1G06630 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.7e-06 55.8 251 29.1
BcaC07g37186 Brassica carinata HOM05D000689 ORTHO05D000015 4.7e-06 55.8 245 33.9
Carub.0005s2741 Capsella rubella HOM05D000689 ORTHO05D000015 4.7e-06 55.8 118 34.7
Thhalv10006459m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 4.7e-06 55.8 121 33.9
AL5G40750 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 6.2e-06 55.5 235 26.8
A09p52220 Brassica napus HOM05D000689 ORTHO05D000015 6.2e-06 55.5 119 35.3
BolC6t37740H Brassica oleracea HOM05D000689 ORTHO05D000015 6.2e-06 55.5 122 35.2
Thhalv10005914m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 6.2e-06 55.5 128 37.5


User provided reference genes

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