Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 8.6e-129 463.8 253 100.0
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 3.6e-119 431.8 253 94.1
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-101 373.6 205 96.6
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-98 362.8 256 83.2
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-93 345.9 198 93.4
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 9.7e-88 327.4 170 99.4
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 6.3e-87 324.7 170 98.2
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-86 323.9 170 98.2
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-82 310.5 231 76.6
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-80 302.4 170 92.9
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-76 290.4 170 89.4
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 4.8e-71 271.9 160 88.8
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 4.2e-59 232.3 140 95.7
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 3.6e-58 229.2 140 96.4
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 7.0e-54 214.9 164 71.3
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-53 213.8 164 71.3
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-52 210.7 163 70.6
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 6.5e-52 208.4 164 70.1
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 4.2e-51 205.7 164 68.9
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-47 194.1 155 67.7
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 1.7e-47 193.7 155 67.7
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 6.3e-47 191.8 158 68.4
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 8.3e-47 191.4 158 68.4
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 1.8e-46 190.3 155 67.1
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 2.4e-46 189.9 155 67.1
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-45 187.6 93 96.8
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 2.0e-45 186.8 155 65.8
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 1.0e-44 184.5 155 65.8
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-44 183.0 148 69.6
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 5.0e-44 182.2 145 69.7
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 9.5e-43 177.9 151 64.9
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-42 176.8 148 68.9
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 6.1e-42 175.3 146 67.8
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 8.0e-42 174.9 160 63.1
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-41 173.3 123 74.0
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 2.3e-41 173.3 139 67.6
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-40 170.2 186 57.0
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 1.3e-39 167.5 143 66.4
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 4.9e-39 165.6 123 72.4
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-38 164.1 81 98.8
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-37 160.2 150 63.3
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 2.7e-37 159.8 133 68.4
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 6.0e-37 158.7 133 67.7
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 1.3e-36 157.5 151 56.3
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 1.3e-36 157.5 126 67.5
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 1.3e-36 157.5 133 68.4
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-36 156.8 142 62.0
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-36 156.0 133 68.4
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 5.0e-36 155.6 121 69.4
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 5.0e-36 155.6 126 66.7
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 5.6e-35 152.1 126 65.9
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-34 150.6 82 89.0
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 3.6e-34 149.4 139 61.9
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 2.0e-32 143.7 173 50.9
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 4.1e-30 136.0 178 49.4
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.6e-29 134.0 170 45.3
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 5.0e-28 129.0 124 59.7
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.9e-27 127.1 157 51.0
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 9.5e-27 124.8 66 87.9
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-25 120.6 131 55.0
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-25 120.2 85 68.2
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 8.9e-25 118.2 110 54.5
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-23 113.2 64 81.2
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 4.9e-23 112.5 105 61.0
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 4.9e-23 112.5 111 53.2
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 1.1e-22 111.3 147 51.7
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-22 111.3 64 79.7
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 1.1e-22 111.3 147 51.7
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 2.4e-22 110.2 55 92.7
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 3.2e-22 109.8 109 62.4
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-21 107.8 150 46.0
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 1.0e-20 104.8 137 46.7
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 1.7e-20 104.0 138 46.4
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 6.6e-20 102.1 157 43.3
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-19 100.5 55 81.8
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-19 100.1 134 42.5
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-18 97.8 114 61.4
BraA05t21895Z Brassica rapa HOM05D004128 ORTHO05D008395 6.2e-18 95.5 55 78.2
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 8.9e-17 91.7 142 41.5
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 3.4e-16 89.7 94 56.4
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 3.4e-16 89.7 132 48.5
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 4.4e-16 89.4 124 48.4
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 1.7e-15 87.4 126 39.7
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 3.8e-15 86.3 122 43.4
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 3.8e-15 86.3 122 43.4
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 3.8e-15 86.3 121 43.8
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-14 84.7 44 93.2
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 1.1e-14 84.7 122 41.8
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-14 84.7 44 93.2
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 1.9e-14 84.0 118 44.1
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 2.4e-14 83.6 121 43.8
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 3.2e-14 83.2 45 97.8
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 4.1e-14 82.8 175 34.3
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 4.1e-14 82.8 90 57.8
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 9.2e-14 81.6 48 79.2
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-13 81.3 72 52.8
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 2.7e-13 80.1 99 53.5
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 3.5e-13 79.7 85 51.8
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 4.6e-13 79.3 126 37.3
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-13 79.3 85 50.6
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 6.0e-13 79.0 85 50.6
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-12 78.2 85 50.6
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-12 78.2 56 80.4
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 1.0e-12 78.2 99 52.5
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 1.7e-12 77.4 99 52.5
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 3.0e-12 76.6 69 65.2
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 5.1e-12 75.9 135 36.3
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 1.1e-11 74.7 187 32.1
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 1.1e-11 74.7 69 62.3
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 3.3e-11 73.2 190 32.6
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 3.3e-11 73.2 39 100.0
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 3.3e-11 73.2 39 100.0
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 3.3e-11 73.2 39 100.0
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.2e-10 71.2 115 38.3
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 1.6e-10 70.9 39 97.4
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 1.6e-10 70.9 98 37.8
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 2.1e-10 70.5 100 50.0
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 2.8e-10 70.1 69 59.4
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 3.6e-10 69.7 39 94.9
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 3.6e-10 69.7 39 94.9
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 3.6e-10 69.7 39 94.9
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 4.7e-10 69.3 68 55.9
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 6.2e-10 68.9 39 94.9
C04p26220 Brassica napus HOM05D004128 ORTHO05D040950 8.1e-10 68.6 41 92.7
BolC4t24184H Brassica oleracea HOM05D004128 ORTHO05D040950 8.1e-10 68.6 41 92.7
C03p16280 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-09 68.2 55 78.2
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 1.8e-09 67.4 100 47.0
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 2.4e-09 67.0 78 42.3
Sp6g02630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 4.0e-09 66.2 106 39.6
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 5.2e-09 65.9 191 29.8
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 6.9e-09 65.5 135 32.6
C03p76590 Brassica napus HOM05D008062 ORTHO05D011707 1.2e-08 64.7 110 39.1
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 3.4e-08 63.2 60 61.7
BcaC01g00876 Brassica carinata HOM05D004128 ORTHO05D008395 4.4e-08 62.8 38 76.3
BolC9t53917H Brassica oleracea HOM05D008062 ORTHO05D011707 4.4e-08 62.8 110 38.2
BraA05t20613Z Brassica rapa HOM05D008062 ORTHO05D008395 4.4e-08 62.8 110 38.2
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 7.6e-08 62.0 55 49.1
BolC6t37270H Brassica oleracea HOM05D004128 ORTHO05D008395 1.7e-07 60.8 39 74.4
BcaC03g16254 Brassica carinata HOM05D003554 ORTHO05D005130 2.2e-07 60.5 164 31.7
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 4.9e-07 59.3 83 42.2
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 4.9e-07 59.3 83 42.2
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 8.4e-07 58.5 185 29.2
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 8.4e-07 58.5 120 32.5
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.9e-06 57.4 57 47.4
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 2.4e-06 57.0 49 63.3
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 2.4e-06 57.0 49 65.3
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 2.4e-06 57.0 80 40.0
AT5G24275 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 3.2e-06 56.6 159 26.4
BcaB04g17553 Brassica carinata HOM05D008316 ORTHO05D014956 5.4e-06 55.8 76 44.7
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 5.4e-06 55.8 49 65.3
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 5.4e-06 55.8 61 54.1
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 5.4e-06 55.8 49 65.3
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 7.1e-06 55.5 59 54.2
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 7.1e-06 55.5 61 59.0
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 9.3e-06 55.1 111 32.4
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 9.3e-06 55.1 111 32.4


User provided reference genes

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