Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p20900 Brassica napus HOM05D008816 ORTHO05D011113 2.0e-30 135.2 72 100.0
BolC8t49728H Brassica oleracea HOM05D008816 ORTHO05D011113 2.0e-30 135.2 72 100.0
BraA08t34825Z Brassica rapa HOM05D008816 ORTHO05D011113 1.1e-28 129.4 72 95.8
BraA08t34824Z Brassica rapa HOM05D008816 ORTHO05D011113 1.9e-28 128.6 72 95.8
BcaB03g12813 Brassica carinata HOM05D008816 ORTHO05D011113 2.5e-28 128.3 72 94.4
BcaC07g39105 Brassica carinata HOM05D008816 ORTHO05D011113 5.5e-28 127.1 72 94.4
C08p20880 Brassica napus HOM05D008816 ORTHO05D011113 7.9e-27 123.2 72 94.4
BolC8t49726H Brassica oleracea HOM05D008816 ORTHO05D011113 7.9e-27 123.2 72 94.4
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 7.4e-25 116.7 66 95.5
Sp1g19060 Schrenkiella parvula HOM05D008816 ORTHO05D011113 3.8e-21 104.4 71 77.5
BraA07t29249Z Brassica rapa HOM05D008816 ORTHO05D011113 6.1e-19 97.1 71 76.1
A06p17580 Brassica napus HOM05D008816 ORTHO05D011113 3.0e-18 94.7 70 75.7
C07p22060 Brassica napus HOM05D008816 ORTHO05D011113 3.0e-18 94.7 71 76.1
BraA06t24853Z Brassica rapa HOM05D008816 ORTHO05D011113 3.0e-18 94.7 70 75.7
BcaC05g26064 Brassica carinata HOM05D008816 ORTHO05D011113 5.1e-18 94.0 70 75.7
C05p20480 Brassica napus HOM05D008816 ORTHO05D011113 5.1e-18 94.0 70 75.7
BolC5t30746H Brassica oleracea HOM05D008816 ORTHO05D011113 5.1e-18 94.0 70 75.7
A07p15070 Brassica napus HOM05D008816 ORTHO05D011113 6.7e-18 93.6 71 74.6
BcaC06g34895 Brassica carinata HOM05D008816 ORTHO05D011113 1.1e-17 92.8 71 76.1
BolC7t42736H Brassica oleracea HOM05D008816 ORTHO05D011113 1.1e-17 92.8 71 76.1
BcaB07g32150 Brassica carinata HOM05D008816 ORTHO05D011113 1.5e-17 92.4 70 75.7
BcaB03g14263 Brassica carinata HOM05D008816 ORTHO05D011113 4.8e-16 87.4 71 73.2
BcaB03g14265 Brassica carinata HOM05D008816 ORTHO05D011113 8.2e-16 86.7 71 67.6
A07p15090 Brassica napus HOM05D008816 ORTHO05D011113 6.9e-15 83.6 71 64.8
BraA07t29250Z Brassica rapa HOM05D008816 ORTHO05D011113 6.9e-15 83.6 71 64.8
AL1G34670 Arabidopsis lyrata HOM05D008816 ORTHO05D011113 7.7e-14 80.1 69 65.2
BcaB05g22554 Brassica carinata HOM05D008816 ORTHO05D011113 1.3e-13 79.3 47 91.5
BcaC06g34859 Brassica carinata HOM05D008816 ORTHO05D011113 1.3e-13 79.3 71 66.2
C07p22160 Brassica napus HOM05D008816 ORTHO05D011113 1.3e-13 79.3 71 66.2
BolC7t42783H Brassica oleracea HOM05D008816 ORTHO05D011113 1.3e-13 79.3 71 66.2
Carub.0001s2095 Capsella rubella HOM05D008816 ORTHO05D011113 4.2e-12 74.3 70 60.0
A06p17570 Brassica napus HOM05D008816 ORTHO05D011113 2.1e-11 72.0 70 55.7
BraA06t24852Z Brassica rapa HOM05D008816 ORTHO05D011113 2.1e-11 72.0 70 55.7
BcaB05g22551 Brassica carinata HOM05D008816 ORTHO05D011113 3.6e-11 71.2 71 59.2
BcaB07g32149 Brassica carinata HOM05D008816 ORTHO05D011113 6.1e-11 70.5 71 59.2
Sp1g19050 Schrenkiella parvula HOM05D008816 ORTHO05D011113 1.8e-10 68.9 74 54.1
BcaC05g26063 Brassica carinata HOM05D008816 ORTHO05D032745 3.0e-10 68.2 64 62.5
C05p20460 Brassica napus HOM05D008816 ORTHO05D032745 3.0e-10 68.2 64 62.5
AL1G34680 Arabidopsis lyrata HOM05D008816 ORTHO05D011113 3.9e-10 67.8 71 57.7
CARHR021890 Cardamine hirsuta HOM05D008816 ORTHO05D011113 6.7e-10 67.0 70 57.1
BolC5t30739H Brassica oleracea HOM05D008816 ORTHO05D032745 5.7e-09 63.9 66 57.6
BolC7t42740H Brassica oleracea HOM05D008816 ORTHO05D011113 6.9e-07 57.0 38 78.9
Carub.0001s2096 Capsella rubella HOM05D008816 ORTHO05D011113 1.2e-06 56.2 72 52.8


User provided reference genes

Program Settings