Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p20460 Brassica napus HOM05D000535 ORTHO05D032800 9.8e-52 206.5 100 100.0
BolC8t49674H Brassica oleracea HOM05D000535 ORTHO05D032800 9.8e-52 206.5 100 100.0
BcaC07g39060 Brassica carinata HOM05D000535 ORTHO05D032800 3.6e-38 161.4 79 97.5
C06p47450 Brassica napus HOM05D000535 ORTHO05D000427 1.8e-16 89.4 69 65.2
A07p39270 Brassica napus HOM05D000535 ORTHO05D000427 2.3e-16 89.0 65 67.7
BraA07t31474Z Brassica rapa HOM05D000535 ORTHO05D000427 2.3e-16 89.0 65 67.7
BcaB03g15046 Brassica carinata HOM05D000535 ORTHO05D000427 1.1e-15 86.7 65 67.7
BolC6t39785H Brassica oleracea HOM05D000535 ORTHO05D000427 3.3e-15 85.1 65 66.2
C06p47490 Brassica napus HOM05D000535 ORTHO05D000427 4.3e-15 84.7 65 64.6
BolC6t39788H Brassica oleracea HOM05D000535 ORTHO05D000427 4.3e-15 84.7 65 64.6
BcaB03g15045 Brassica carinata HOM05D000535 ORTHO05D000427 4.8e-14 81.3 65 63.1
C02p31000 Brassica napus HOM05D000535 ORTHO05D000427 8.1e-14 80.5 83 56.6
A02p18650 Brassica napus HOM05D000535 ORTHO05D000427 1.1e-13 80.1 66 65.2
A07p39240 Brassica napus HOM05D000535 ORTHO05D000427 1.1e-13 80.1 66 62.1
C02p30760 Brassica napus HOM05D000535 ORTHO05D000427 1.1e-13 80.1 66 62.1
BraA02t06908Z Brassica rapa HOM05D000535 ORTHO05D000427 1.1e-13 80.1 66 65.2
BraA07t31473Z Brassica rapa HOM05D000535 ORTHO05D000427 1.1e-13 80.1 66 62.1
BolC6t39783H Brassica oleracea HOM05D000535 ORTHO05D000427 1.8e-13 79.3 66 62.1
BcaC08g46749 Brassica carinata HOM05D000535 ORTHO05D000427 3.1e-13 78.6 66 62.1
BolC2t09143H Brassica oleracea HOM05D000535 ORTHO05D000427 3.1e-13 78.6 66 60.6
BcaC08g46753 Brassica carinata HOM05D000535 ORTHO05D000427 6.9e-13 77.4 62 62.9
A02p18600 Brassica napus HOM05D000535 ORTHO05D000427 1.2e-12 76.6 66 60.6
BolC2t09133H Brassica oleracea HOM05D000535 ORTHO05D000427 1.2e-12 76.6 83 50.6
C02p30960 Brassica napus HOM05D000535 ORTHO05D000427 1.5e-12 76.3 66 59.1
BcaC08g46752 Brassica carinata HOM05D000535 ORTHO05D000427 2.6e-12 75.5 83 49.4
C06p47480 Brassica napus HOM05D000535 ORTHO05D000427 2.6e-12 75.5 70 54.3
BolC6t39786H Brassica oleracea HOM05D000535 ORTHO05D000427 2.6e-12 75.5 83 49.4
BolC2t09139H Brassica oleracea HOM05D000535 ORTHO05D000427 3.4e-12 75.1 66 62.1
A07p39220 Brassica napus HOM05D000535 ORTHO05D000427 5.8e-12 74.3 67 59.7
BraA02t06900Z Brassica rapa HOM05D000535 ORTHO05D000427 5.8e-12 74.3 66 59.1
BraA07t31472Z Brassica rapa HOM05D000535 ORTHO05D000427 5.8e-12 74.3 67 59.7
C09p22220 Brassica napus HOM05D000535 ORTHO05D000427 7.6e-12 73.9 66 62.1
BolC9t55136H Brassica oleracea HOM05D000535 ORTHO05D000427 7.6e-12 73.9 66 62.1
BraA02t06895Z Brassica rapa HOM05D000535 ORTHO05D000427 7.6e-12 73.9 97 44.3
BraA09t37420Z Brassica rapa HOM05D000535 ORTHO05D000427 7.6e-12 73.9 66 62.1
BcaB07g31187 Brassica carinata HOM05D000115 ORTHO05D000427 1.0e-11 73.6 66 60.6
BcaB07g33694 Brassica carinata HOM05D000535 ORTHO05D000427 1.7e-11 72.8 66 56.1
A09p17870 Brassica napus HOM05D000535 ORTHO05D000427 1.7e-11 72.8 66 62.1
BraA07t31471Z Brassica rapa HOM05D000535 ORTHO05D000427 1.7e-11 72.8 66 57.6
A07p39230 Brassica napus HOM05D000535 ORTHO05D000427 3.8e-11 71.6 67 56.7
BolC2t09134H Brassica oleracea HOM05D000535 ORTHO05D000427 3.8e-11 71.6 65 60.0
BcaC08g46745 Brassica carinata HOM05D000535 ORTHO05D000427 6.5e-11 70.9 67 58.2
C06p47420 Brassica napus HOM05D000535 ORTHO05D000427 6.5e-11 70.9 67 58.2
BolC6t39780H Brassica oleracea HOM05D000535 ORTHO05D000427 6.5e-11 70.9 67 58.2
BcaB03g15044 Brassica carinata HOM05D000535 ORTHO05D000427 1.1e-10 70.1 66 56.1
C02p30820 Brassica napus HOM05D000535 ORTHO05D000427 1.9e-10 69.3 68 55.9
BolC2t09148H Brassica oleracea HOM05D000535 ORTHO05D000427 1.9e-10 69.3 56 69.6
A02p18660 Brassica napus HOM05D000535 ORTHO05D000427 2.5e-10 68.9 66 56.1
BraA02t06909Z Brassica rapa HOM05D000535 ORTHO05D000427 2.5e-10 68.9 66 56.1
BcaC08g46747 Brassica carinata HOM05D000535 ORTHO05D000427 4.2e-10 68.2 67 56.7
BolC6t39781H Brassica oleracea HOM05D000535 ORTHO05D000427 4.2e-10 68.2 67 56.7
Sp5g28240 Schrenkiella parvula HOM05D000535 ORTHO05D000427 4.2e-10 68.2 69 56.5
C02p30780 Brassica napus HOM05D000535 ORTHO05D000427 5.5e-10 67.8 83 47.0
BcaB03g15042 Brassica carinata HOM05D000535 ORTHO05D000427 7.1e-10 67.4 67 53.7
BcaB03g15040 Brassica carinata HOM05D000535 ORTHO05D000427 1.6e-09 66.2 67 55.2
C02p30930 Brassica napus HOM05D000535 ORTHO05D000427 2.1e-09 65.9 66 53.0
BolC2t09147H Brassica oleracea HOM05D000535 ORTHO05D000427 2.1e-09 65.9 66 54.5
BcaC04g22195 Brassica carinata HOM05D000535 ORTHO05D000427 3.5e-09 65.1 69 55.1
C02p30970 Brassica napus HOM05D000535 ORTHO05D000427 3.5e-09 65.1 66 53.0
C06p47430 Brassica napus HOM05D000535 ORTHO05D000427 4.6e-09 64.7 67 55.2
BraA02t06901Z Brassica rapa HOM05D000535 ORTHO05D000427 4.6e-09 64.7 54 64.8
Sp5g28230 Schrenkiella parvula HOM05D000535 ORTHO05D000427 4.6e-09 64.7 73 49.3
Carub.0002s2005 Capsella rubella HOM05D000535 ORTHO05D000427 1.0e-08 63.5 62 58.1
A02p18640 Brassica napus HOM05D000535 ORTHO05D000427 1.3e-08 63.2 66 53.0
BraA02t06907Z Brassica rapa HOM05D000535 ORTHO05D000427 1.3e-08 63.2 66 53.0
BcaC08g45653 Brassica carinata HOM05D000535 ORTHO05D000427 1.8e-08 62.8 61 57.4
C06p34110 Brassica napus HOM05D000535 ORTHO05D000427 1.8e-08 62.8 61 57.4
BolC2t09141H Brassica oleracea HOM05D000535 ORTHO05D000427 1.8e-08 62.8 54 59.3
BcaB03g12616 Brassica carinata HOM05D000535 ORTHO05D000427 3.0e-08 62.0 68 52.9
A07p29870 Brassica napus HOM05D000535 ORTHO05D000427 3.9e-08 61.6 61 57.4
BraA07t30625Z Brassica rapa HOM05D000535 ORTHO05D000427 3.9e-08 61.6 61 57.4
BcaB03g15043 Brassica carinata HOM05D000535 ORTHO05D000427 8.7e-08 60.5 67 53.7
BcaB03g15701 Brassica carinata HOM05D000535 ORTHO05D000427 8.7e-08 60.5 61 55.7
BcaC08g45655 Brassica carinata HOM05D000535 ORTHO05D000427 8.7e-08 60.5 61 55.7
BolC6t38525H Brassica oleracea HOM05D000535 ORTHO05D000427 1.5e-07 59.7 61 55.7
BcaB04g17496 Brassica carinata HOM05D000535 ORTHO05D000427 3.3e-07 58.5 80 45.0
C02p30880 Brassica napus HOM05D014798 ORTHO05D000427 5.7e-07 57.8 43 65.1
BcaB03g15041 Brassica carinata HOM05D000535 ORTHO05D000427 1.6e-06 56.2 76 40.8
C06p34120 Brassica napus HOM05D000535 ORTHO05D000427 1.6e-06 56.2 61 52.5
Thhalv10019151m.g Eutrema salsugineum HOM05D000535 ORTHO05D000427 1.6e-06 56.2 62 53.2
AL2G33060 Arabidopsis lyrata HOM05D000535 ORTHO05D000427 2.1e-06 55.8 62 51.6
BcaB03g15038 Brassica carinata HOM05D000535 ORTHO05D000427 2.1e-06 55.8 62 51.6
BcaB03g15704 Brassica carinata HOM05D000535 ORTHO05D000427 2.1e-06 55.8 62 53.2
BcaB03g15702 Brassica carinata HOM05D000535 ORTHO05D000427 2.8e-06 55.5 61 52.5
C06p47400 Brassica napus HOM05D000535 ORTHO05D000427 3.7e-06 55.1 62 51.6
BcaC08g45654 Brassica carinata HOM05D000535 ORTHO05D000427 4.8e-06 54.7 61 50.8
BcaC08g45656 Brassica carinata HOM05D000535 ORTHO05D000427 4.8e-06 54.7 61 50.8
A07p39210 Brassica napus HOM05D000535 ORTHO05D000427 4.8e-06 54.7 61 50.8
BraA07t31470Z Brassica rapa HOM05D000535 ORTHO05D000427 4.8e-06 54.7 61 50.8
CARHR262740 Cardamine hirsuta HOM05D000535 ORTHO05D000427 4.8e-06 54.7 68 50.0
AT1G73260 Arabidopsis thaliana HOM05D000535 ORTHO05D000427 8.2e-06 53.9 61 49.2


User provided reference genes

Program Settings