Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p19380 Brassica napus HOM05D001044 ORTHO05D015489 1.3e-45 186.0 96 100.0
C02p49370 Brassica napus HOM05D001044 ORTHO05D015489 2.0e-38 162.2 84 96.4
BcaC01g06819 Brassica carinata HOM05D001044 ORTHO05D015489 2.0e-30 135.6 78 91.0
BcaB02g08037 Brassica carinata HOM05D001044 ORTHO05D006993 3.1e-26 121.7 78 80.8
Sp7g05800 Schrenkiella parvula HOM05D001044 ORTHO05D006993 1.5e-25 119.4 79 82.3
C04p43670 Brassica napus HOM05D001044 ORTHO05D006993 2.4e-23 112.1 77 80.5
BcaC02g09519 Brassica carinata HOM05D001044 ORTHO05D006993 5.4e-23 110.9 77 79.2
BolC4t25948H Brassica oleracea HOM05D001044 ORTHO05D006993 5.4e-23 110.9 77 79.2
Thhalv10004689m.g Eutrema salsugineum HOM05D001044 ORTHO05D006993 1.0e-21 106.7 78 74.4
BraA04t16686Z Brassica rapa HOM05D001044 ORTHO05D006993 8.6e-21 103.6 77 77.9
CARHR216450 Cardamine hirsuta HOM05D001044 ORTHO05D006993 8.6e-21 103.6 80 73.8
A04p10190 Brassica napus HOM05D001044 ORTHO05D006993 1.1e-20 103.2 77 77.9
Aa31LG9G17820 Aethionema arabicum HOM05D001044 ORTHO05D006993 1.5e-20 102.8 95 64.2
AL7G45260 Arabidopsis lyrata HOM05D001044 ORTHO05D006993 2.8e-19 98.6 81 70.4
BcaB06g27030 Brassica carinata HOM05D001044 ORTHO05D006993 1.4e-18 96.3 77 70.1
Carub.0007s3194 Capsella rubella HOM05D001044 ORTHO05D006993 3.1e-18 95.1 80 68.8
BcaNung05709 Brassica carinata HOM05D001044 ORTHO05D015489 5.2e-18 94.4 52 92.3
C03p45650 Brassica napus HOM05D001044 ORTHO05D015489 5.2e-18 94.4 52 92.3
AT5G36290 Arabidopsis thaliana HOM05D001044 ORTHO05D006993 9.9e-17 90.1 81 64.2
BcaC03g17024 Brassica carinata HOM05D001044 ORTHO05D015489 2.9e-16 88.6 45 93.3
BolC2t11023H Brassica oleracea HOM05D001044 ORTHO05D015489 8.3e-16 87.0 45 91.1
THA.LOC104805697 Tarenaya hassleriana HOM05D001044 ORTHO05D006993 2.4e-15 85.5 97 59.8
A07p13580 Brassica napus HOM05D001044 ORTHO05D015489 1.2e-14 83.2 44 95.5
C08p15320 Brassica napus HOM05D001044 ORTHO05D015489 1.2e-14 83.2 44 95.5
BcaC01g03348 Brassica carinata HOM05D001044 ORTHO05D015489 3.3e-12 75.1 41 90.2
C03p38610 Brassica napus HOM05D001044 ORTHO05D015489 3.3e-12 75.1 42 90.5
THA.LOC104823812 Tarenaya hassleriana HOM05D001044 ORTHO05D006993 4.3e-12 74.7 87 51.7
BolC3t16134H Brassica oleracea HOM05D001044 ORTHO05D015489 9.6e-12 73.6 42 88.1
Cpa.g.sc39.1 Carica papaya HOM05D001044 ORTHO05D006993 3.1e-10 68.6 82 51.2
Atru.chr12.1793 Acer truncatum HOM05D001044 ORTHO05D006993 2.6e-09 65.5 80 48.8
EL10Ac4g09975 Beta vulgaris HOM05D001044 ORTHO05D006993 8.4e-08 60.5 76 51.3
AUR62000318 Chenopodium quinoa HOM05D000795 ORTHO05D000706 1.9e-07 59.3 76 53.9
AUR62006663 Chenopodium quinoa HOM05D000795 ORTHO05D006993 1.9e-07 59.3 76 53.9
COL.COLO4_27386 Corchorus olitorius HOM05D001044 ORTHO05D006993 1.2e-06 56.6 82 43.9
Thecc.05G199900 Theobroma cacao HOM05D001044 ORTHO05D006993 2.7e-06 55.5 83 45.8
Duzib177G0876 Durio zibethinus HOM05D001044 ORTHO05D006993 4.6e-06 54.7 82 41.5
Duzib106G1207 Durio zibethinus HOM05D001044 ORTHO05D006993 6.0e-06 54.3 82 42.7
TWI18G0428 Tripterygium wilfordii HOM05D001044 ORTHO05D006993 7.8e-06 53.9 72 45.8


User provided reference genes

Program Settings