Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p12010 Brassica napus HOM05D011295 ORTHO05D014420 1.2e-228 796.2 398 100.0
BcaC07g38434 Brassica carinata HOM05D011295 ORTHO05D014420 1.6e-198 696.0 332 100.0
A08p35230 Brassica napus HOM05D011295 ORTHO05D014420 2.1e-153 546.2 334 79.0
BraA08t35431Z Brassica rapa HOM05D011295 ORTHO05D014420 3.3e-135 485.7 334 72.8
BcaC07g38433 Brassica carinata HOM05D011295 ORTHO05D014420 7.8e-108 394.8 229 90.4
C08p11940 Brassica napus HOM05D011295 ORTHO05D014420 5.4e-77 292.4 137 100.0
BolC8t47890H Brassica oleracea HOM05D011295 ORTHO05D014420 3.0e-75 286.6 373 42.6
BcaC07g38457 Brassica carinata HOM05D011295 ORTHO05D032157 4.0e-56 223.0 284 47.2
AL1G49360 Arabidopsis lyrata HOM05D011295 ORTHO05D014420 2.5e-53 213.8 321 39.3
AT3G19515 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 1.3e-51 208.0 330 36.4
Carub.0003s1933 Capsella rubella HOM05D003129 ORTHO05D014420 2.4e-48 197.2 316 37.0
BcaB07g34163 Brassica carinata HOM05D017026 ORTHO05D014420 7.9e-44 182.2 316 36.4
BcaC06g35061 Brassica carinata HOM05D011295 ORTHO05D014420 3.9e-43 179.9 335 35.2
AT1G23935 Arabidopsis thaliana HOM05D000929 ORTHO05D038725 2.6e-39 167.2 342 32.2
BolC5t31211H Brassica oleracea HOM05D003496 ORTHO05D003909 3.0e-35 153.7 330 31.2
C05p24820 Brassica napus HOM05D000415 ORTHO05D003909 3.9e-35 153.3 330 31.2
AL1G37660 Arabidopsis lyrata HOM05D003129 ORTHO05D038725 6.7e-35 152.5 329 31.9
AT1G22080 Arabidopsis thaliana HOM05D011295 ORTHO05D014420 2.6e-31 140.6 187 39.6
C08p13470 Brassica napus HOM05D017215 ORTHO05D031730 1.1e-29 135.2 245 34.7
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 7.2e-29 132.5 288 31.6
BcaC05g26434 Brassica carinata HOM05D000415 ORTHO05D003909 1.1e-26 125.2 282 30.5
AL7G36450 Arabidopsis lyrata HOM05D013859 ORTHO05D018433 6.3e-25 119.4 278 32.4
C08p12280 Brassica napus HOM05D011295 ORTHO05D032157 6.3e-25 119.4 160 45.6
C06p20140 Brassica napus HOM05D000331 ORTHO05D027779 1.4e-24 118.2 319 27.6
BolC6t37194H Brassica oleracea HOM05D013757 ORTHO05D027779 1.2e-23 115.2 308 27.9
AL7G23550 Arabidopsis lyrata HOM05D008615 ORTHO05D021443 2.6e-23 114.0 224 34.4
AL5G23100 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 1.7e-22 111.3 280 29.6
CARHR170770 Cardamine hirsuta HOM05D013757 ORTHO05D018429 1.5e-21 108.2 289 27.7
AL4G38030 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 2.5e-21 107.5 241 29.5
AL4G38000 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 3.2e-21 107.1 238 29.4
BcaC07g38550 Brassica carinata HOM05D017215 ORTHO05D031730 3.2e-21 107.1 244 30.7
BolC8t48869H Brassica oleracea HOM05D011295 ORTHO05D014420 3.2e-21 107.1 85 67.1
A02p20530 Brassica napus HOM05D008615 ORTHO05D027756 1.6e-20 104.8 245 29.0
BcaC03g15654 Brassica carinata HOM05D008615 ORTHO05D027756 2.1e-20 104.4 245 29.4
BolC2t09371H Brassica oleracea HOM05D008615 ORTHO05D027756 2.1e-20 104.4 245 29.4
Carub.0007s2333 Capsella rubella HOM05D000344 ORTHO05D003292 2.7e-20 104.0 278 31.3
BcaC06g33427 Brassica carinata HOM05D013757 ORTHO05D018429 3.6e-20 103.6 315 27.0
BcaC07g39853 Brassica carinata HOM05D008615 ORTHO05D011779 3.6e-20 103.6 242 31.4
Carub.0007s1099 Capsella rubella HOM05D008615 ORTHO05D011779 8.0e-20 102.4 204 30.9
AL7G22840 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 1.8e-19 101.3 237 29.1
C02p33310 Brassica napus HOM05D008615 ORTHO05D027756 4.0e-19 100.1 247 29.1
A02p02550 Brassica napus HOM05D013859 ORTHO05D018433 4.8e-17 93.2 222 28.8
BraA01t00798Z Brassica rapa HOM05D008615 ORTHO05D011779 4.8e-17 93.2 236 25.8
BraA02t05224Z Brassica rapa HOM05D013859 ORTHO05D018433 4.8e-17 93.2 227 28.2
BolC8t48977H Brassica oleracea HOM05D017215 ORTHO05D031730 8.2e-17 92.4 152 36.2
C01p09880 Brassica napus HOM05D008615 ORTHO05D011779 1.1e-16 92.0 236 25.8
BolC1t00951H Brassica oleracea HOM05D008615 ORTHO05D011779 1.1e-16 92.0 236 25.8
BcaC09g52204 Brassica carinata HOM05D008615 ORTHO05D011779 7.0e-16 89.4 233 25.8
Thhalv10026918m.g Eutrema salsugineum HOM05D008615 ORTHO05D011779 1.6e-15 88.2 226 28.8
A03p58490 Brassica napus HOM05D008615 ORTHO05D021443 5.9e-15 86.3 172 33.7
BcaC03g13485 Brassica carinata HOM05D013859 ORTHO05D018433 7.7e-15 85.9 219 29.7
C02p06790 Brassica napus HOM05D013859 ORTHO05D018433 1.7e-14 84.7 215 30.2
BolC8t50672H Brassica oleracea HOM05D008615 ORTHO05D011779 2.9e-14 84.0 241 29.0
AL5G23010 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 5.0e-14 83.2 247 28.7
AL1G32050 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 1.5e-13 81.6 271 25.5
BcaB03g13339 Brassica carinata HOM05D011295 ORTHO05D014420 2.5e-13 80.9 53 71.7
BcaC03g17688 Brassica carinata HOM05D017026 ORTHO05D020016 2.1e-12 77.8 125 39.2
C02p56970 Brassica napus HOM05D017026 ORTHO05D020016 2.1e-12 77.8 125 39.2
BolC2t11766H Brassica oleracea HOM05D017026 ORTHO05D020016 2.1e-12 77.8 125 39.2
C04p31890 Brassica napus HOM05D008615 ORTHO05D011779 3.6e-12 77.0 213 27.7
C01p09160 Brassica napus HOM05D000574 ORTHO05D004834 6.1e-12 76.3 206 26.2
BolC1t00907H Brassica oleracea HOM05D000574 ORTHO05D004834 6.1e-12 76.3 206 26.2
BraA03t14910Z Brassica rapa HOM05D008615 ORTHO05D021443 6.8e-11 72.8 111 39.6
BolC1t00941H Brassica oleracea HOM05D008615 ORTHO05D011779 3.7e-09 67.0 176 27.3
C01p09790 Brassica napus HOM05D008615 ORTHO05D011779 4.8e-09 66.6 176 27.3
A06p42890 Brassica napus HOM05D013757 ORTHO05D018429 8.3e-09 65.9 140 30.7
BcaC09g52217 Brassica carinata HOM05D008615 ORTHO05D011779 1.8e-08 64.7 172 27.9
BolC7t45255H Brassica oleracea HOM05D013757 ORTHO05D018429 3.1e-08 63.9 187 27.8
BraA07t28610Z Brassica rapa HOM05D017215 ORTHO05D024431 7.0e-08 62.8 78 41.0
C08p30540 Brassica napus HOM05D008615 ORTHO05D011779 1.2e-07 62.0 130 33.1
BcaC03g17684 Brassica carinata HOM05D017026 ORTHO05D020016 2.0e-07 61.2 78 41.0
Lj4g0026833 Lotus japonicus HOM05D000069 ORTHO05D000060 2.0e-07 61.2 210 26.7
C07p56510 Brassica napus HOM05D008615 ORTHO05D021443 4.5e-07 60.1 103 35.0
BolC4t24741H Brassica oleracea HOM05D008615 ORTHO05D011779 8.5e-06 55.8 205 23.4


User provided reference genes

Program Settings