Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p11700 Brassica napus HOM05D002679 ORTHO05D010656 4.2e-95 351.3 170 100.0
C08p11610 Brassica napus HOM05D002679 ORTHO05D010656 5.0e-72 274.6 138 96.4
BolC8t48845H Brassica oleracea HOM05D002679 ORTHO05D010656 1.2e-68 263.5 139 92.8
BcaC07g38420 Brassica carinata HOM05D002679 ORTHO05D010656 2.5e-63 245.7 192 67.7
C08p11810 Brassica napus HOM05D002679 ORTHO05D010656 2.5e-63 245.7 192 67.7
C08p11990 Brassica napus HOM05D002679 ORTHO05D010656 2.5e-63 245.7 192 67.7
BcaC07g38413 Brassica carinata HOM05D002679 ORTHO05D010656 1.4e-61 240.0 213 62.4
BolC8t48847H Brassica oleracea HOM05D002679 ORTHO05D010656 2.8e-59 232.3 213 61.0
BcaC07g38453 Brassica carinata HOM05D002679 ORTHO05D010656 7.0e-58 227.6 202 62.9
BcaB03g13318 Brassica carinata HOM05D002679 ORTHO05D010656 1.2e-57 226.9 214 60.3
BcaC07g38440 Brassica carinata HOM05D002679 ORTHO05D010656 2.0e-57 226.1 179 67.6
BraA08t35412Z Brassica rapa HOM05D002679 ORTHO05D010656 2.3e-56 222.6 192 64.1
A08p35200 Brassica napus HOM05D002679 ORTHO05D010656 1.8e-50 203.0 217 56.7
BraA08t35429Z Brassica rapa HOM05D002679 ORTHO05D010656 1.8e-50 203.0 217 56.7
BolC8t47165H Brassica oleracea HOM05D002679 ORTHO05D010656 7.0e-50 201.1 217 54.4
C08p12220 Brassica napus HOM05D002679 ORTHO05D010656 5.0e-48 194.9 106 87.7
C08p12080 Brassica napus HOM05D002679 ORTHO05D010656 2.8e-46 189.1 176 60.8
C08p03630 Brassica napus HOM05D002679 ORTHO05D010656 8.0e-46 187.6 214 53.7
BolC8t48863H Brassica oleracea HOM05D002679 ORTHO05D010656 7.5e-44 181.0 131 72.5
BolC8t48840H Brassica oleracea HOM05D002679 ORTHO05D010656 9.2e-42 174.1 89 93.3
BcaB03g13329 Brassica carinata HOM05D002679 ORTHO05D010656 8.6e-40 167.5 212 50.0
C08p11660 Brassica napus HOM05D002679 ORTHO05D010656 1.6e-38 163.3 105 79.0
A08p37260 Brassica napus HOM05D002679 ORTHO05D010656 2.8e-38 162.5 212 47.2
BraA08t35623Z Brassica rapa HOM05D002679 ORTHO05D010656 2.8e-38 162.5 212 47.2
BcaC07g38405 Brassica carinata HOM05D000329 ORTHO05D000833 4.7e-38 161.8 93 81.7
A08p35020 Brassica napus HOM05D002679 ORTHO05D010656 1.9e-34 149.8 162 53.7
C08p12090 Brassica napus HOM05D002679 ORTHO05D010656 3.0e-32 142.5 178 52.8
BcaC07g38441 Brassica carinata HOM05D002679 ORTHO05D010656 8.6e-32 141.0 205 46.8
C08p11730 Brassica napus HOM05D002679 ORTHO05D010656 4.3e-31 138.7 219 44.3
BcaC07g38414 Brassica carinata HOM05D002679 ORTHO05D010656 8.1e-22 107.8 161 49.1
BolC5t29402H Brassica oleracea HOM05D002679 ORTHO05D020120 6.9e-21 104.8 175 40.0
AL1G35520 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 8.9e-21 104.4 183 42.1
AT1G22090 Arabidopsis thaliana HOM05D002679 ORTHO05D010656 3.4e-20 102.4 181 39.2
BolC8t50310H Brassica oleracea HOM05D002679 ORTHO05D010656 4.4e-20 102.1 155 46.5
BcaB01g00488 Brassica carinata HOM05D002679 ORTHO05D010656 7.6e-20 101.3 157 45.9
AL1G49380 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 3.8e-19 99.0 182 39.0
AL1G35530 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 4.9e-19 98.6 183 41.5
BcaC05g24794 Brassica carinata HOM05D002679 ORTHO05D020120 6.4e-19 98.2 196 36.2
C05p06450 Brassica napus HOM05D002679 ORTHO05D020120 3.2e-18 95.9 175 39.4
BolC5t29406H Brassica oleracea HOM05D002679 ORTHO05D020120 3.2e-18 95.9 175 39.4
BolC5t29435H Brassica oleracea HOM05D002679 ORTHO05D020120 3.2e-18 95.9 196 36.7
C05p06420 Brassica napus HOM05D002679 ORTHO05D020120 4.2e-18 95.5 175 38.3
AL108U10030 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 5.4e-18 95.1 176 40.9
BcaC07g38442 Brassica carinata HOM05D002679 ORTHO05D010656 5.4e-18 95.1 93 59.1
C08p12110 Brassica napus HOM05D002679 ORTHO05D010656 5.4e-18 95.1 93 59.1
AL8G40780 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 2.1e-17 93.2 180 38.9
C05p06760 Brassica napus HOM05D002679 ORTHO05D020120 2.1e-17 93.2 196 36.7
C08p12060 Brassica napus HOM05D002679 ORTHO05D096533 2.1e-17 93.2 68 69.1
AL1G49350 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 1.0e-16 90.9 184 38.0
BcaC07g38416 Brassica carinata HOM05D000200 ORTHO05D000262 1.7e-16 90.1 93 55.9
CARHR170750 Cardamine hirsuta HOM05D002679 ORTHO05D012311 6.6e-16 88.2 175 37.1
BcaB03g14132 Brassica carinata HOM05D002679 ORTHO05D010703 7.3e-15 84.7 187 34.2
Carub.0003s1934 Capsella rubella HOM05D002679 ORTHO05D010703 7.3e-15 84.7 100 45.0
Carub.0003s1935 Capsella rubella HOM05D002679 ORTHO05D010703 7.3e-15 84.7 100 45.0
AL1G37670 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 3.6e-14 82.4 190 34.7
AL2G22820 Arabidopsis lyrata HOM05D002679 ORTHO05D023662 1.4e-13 80.5 177 36.2
AL3G32930 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.4e-13 80.5 186 32.8
AL1G37720 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.8e-13 80.1 209 33.0
AL3G32940 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 5.3e-13 78.6 95 46.3
AL5G38700 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 5.3e-13 78.6 175 33.1
AT1G19060 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 6.9e-13 78.2 99 46.5
Carub.0007s3406 Capsella rubella HOM05D002679 ORTHO05D012311 6.9e-13 78.2 179 33.5
A07p13690 Brassica napus HOM05D002679 ORTHO05D010703 1.2e-12 77.4 194 33.5
A10p28330 Brassica napus HOM05D002679 ORTHO05D023662 1.2e-12 77.4 200 33.5
C05p43390 Brassica napus HOM05D002679 ORTHO05D010703 2.6e-12 76.3 189 35.4
Carub.0007s3405 Capsella rubella HOM05D002679 ORTHO05D012311 2.6e-12 76.3 174 35.1
BcaB03g14128 Brassica carinata HOM05D002679 ORTHO05D010703 3.4e-12 75.9 168 34.5
BcaC06g35072 Brassica carinata HOM05D002679 ORTHO05D010703 4.5e-12 75.5 166 35.5
C09p68590 Brassica napus HOM05D002679 ORTHO05D023662 5.8e-12 75.1 200 32.5
BolC9t59601H Brassica oleracea HOM05D002679 ORTHO05D023662 5.8e-12 75.1 199 31.7
AL1G37710 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 9.9e-12 74.3 204 33.8
AT3G19520 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 9.9e-12 74.3 189 34.4
C06p20110 Brassica napus HOM05D002679 ORTHO05D010656 1.3e-11 73.9 188 34.0
BolC6t37193H Brassica oleracea HOM05D002679 ORTHO05D010656 1.3e-11 73.9 188 34.0
AL5G14060 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 1.7e-11 73.6 92 47.8
Carub.0007s2334 Capsella rubella HOM05D002679 ORTHO05D011194 1.7e-11 73.6 170 32.4
AL1G56900 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 2.2e-11 73.2 102 44.1
A07p13740 Brassica napus HOM05D002679 ORTHO05D010703 2.2e-11 73.2 184 32.6
Carub.0001s2694 Capsella rubella HOM05D002679 ORTHO05D010703 2.2e-11 73.2 183 35.0
Carub.0006s3079 Capsella rubella HOM05D002679 ORTHO05D012452 3.8e-11 72.4 96 43.8
BraA10t44880Z Brassica rapa HOM05D002679 ORTHO05D023662 4.9e-11 72.0 200 32.0
CARHR133380 Cardamine hirsuta HOM05D002679 ORTHO05D012452 4.9e-11 72.0 175 32.0
Carub.0004s2240 Capsella rubella HOM05D002679 ORTHO05D010703 8.4e-11 71.2 86 51.2
BolC4t22130H Brassica oleracea HOM05D002679 ORTHO05D014105 1.1e-10 70.9 142 34.5
Carub.0005s1849 Capsella rubella HOM05D002679 ORTHO05D012311 1.1e-10 70.9 91 44.0
BcaB03g14126 Brassica carinata HOM05D002679 ORTHO05D010703 1.4e-10 70.5 131 35.1
BcaC08g44542 Brassica carinata HOM05D002679 ORTHO05D012311 1.4e-10 70.5 105 45.7
Carub.0001s2342 Capsella rubella HOM05D002679 ORTHO05D010703 1.4e-10 70.5 181 31.5
BcaB03g14130 Brassica carinata HOM05D002679 ORTHO05D010703 2.4e-10 69.7 99 43.4
BcaC02g12340 Brassica carinata HOM05D002679 ORTHO05D014105 2.4e-10 69.7 142 33.8
C04p04980 Brassica napus HOM05D002679 ORTHO05D014105 2.4e-10 69.7 142 33.8
BcaC02g12322 Brassica carinata HOM05D002679 ORTHO05D014105 3.2e-10 69.3 174 33.3
Carub.0001s3874 Capsella rubella HOM05D002679 ORTHO05D010656 3.2e-10 69.3 99 40.4
CARHR279920 Cardamine hirsuta HOM05D002679 ORTHO05D012984 3.2e-10 69.3 175 29.1
BcaB03g14127 Brassica carinata HOM05D002679 ORTHO05D010703 4.2e-10 68.9 187 31.0
AT1G23950 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 7.1e-10 68.2 87 47.1
Carub.0006s1923 Capsella rubella HOM05D002679 ORTHO05D014856 7.1e-10 68.2 165 34.5
BcaB07g34162 Brassica carinata HOM05D002679 ORTHO05D012984 9.3e-10 67.8 92 45.7
CARHR028040 Cardamine hirsuta HOM05D002679 ORTHO05D010703 9.3e-10 67.8 185 34.1
C08p11750 Brassica napus HOM05D002679 ORTHO05D010656 1.2e-09 67.4 77 51.9
Carub.0006s2997 Capsella rubella HOM05D002679 ORTHO05D012452 1.2e-09 67.4 98 42.9
BolC4t22164H Brassica oleracea HOM05D002679 ORTHO05D014105 1.6e-09 67.0 176 34.1
Carub.0001s3873 Capsella rubella HOM05D002679 ORTHO05D010656 2.7e-09 66.2 99 38.4
A09p39720 Brassica napus HOM05D002679 ORTHO05D012311 3.5e-09 65.9 182 31.9
C02p61320 Brassica napus HOM05D002679 ORTHO05D012984 3.5e-09 65.9 132 36.4
BraA07t29124Z Brassica rapa HOM05D002679 ORTHO05D010703 3.5e-09 65.9 108 40.7
AL4G35970 Arabidopsis lyrata HOM05D002679 ORTHO05D012452 6.0e-09 65.1 193 31.1
C07p20140 Brassica napus HOM05D002679 ORTHO05D010703 7.9e-09 64.7 97 42.3
BolC7t42535H Brassica oleracea HOM05D002679 ORTHO05D010703 7.9e-09 64.7 97 42.3
Carub.0007s2335 Capsella rubella HOM05D002679 ORTHO05D011194 7.9e-09 64.7 181 30.4
AL6G32810 Arabidopsis lyrata HOM05D002679 ORTHO05D014856 1.0e-08 64.3 160 33.8
AT1G27860 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 1.0e-08 64.3 168 33.9
BraA09t39471Z Brassica rapa HOM05D002679 ORTHO05D012311 1.0e-08 64.3 181 32.6
BraA09t39473Z Brassica rapa HOM05D002679 ORTHO05D012311 1.0e-08 64.3 183 32.8
AT1G23970 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 1.3e-08 63.9 87 49.4
C08p12230 Brassica napus HOM05D002679 ORTHO05D010656 2.3e-08 63.2 57 61.4
A02p37800 Brassica napus HOM05D002679 ORTHO05D012984 3.0e-08 62.8 180 31.7
AL4G36830 Arabidopsis lyrata HOM05D002679 ORTHO05D012452 3.9e-08 62.4 92 46.7
BcaC03g17689 Brassica carinata HOM05D002679 ORTHO05D012984 3.9e-08 62.4 180 30.6
C02p56980 Brassica napus HOM05D002679 ORTHO05D012984 3.9e-08 62.4 180 30.6
C06p04390 Brassica napus HOM05D002679 ORTHO05D012311 3.9e-08 62.4 182 32.4
BolC2t11767H Brassica oleracea HOM05D002679 ORTHO05D012984 3.9e-08 62.4 180 30.6
BraA02t08763Z Brassica rapa HOM05D002679 ORTHO05D012984 3.9e-08 62.4 180 30.6
C05p24780 Brassica napus HOM05D002679 ORTHO05D012311 5.1e-08 62.0 182 33.0
BolC5t31206H Brassica oleracea HOM05D002679 ORTHO05D012311 5.1e-08 62.0 182 33.0
BcaB08g37262 Brassica carinata HOM05D003355 ORTHO05D006192 6.7e-08 61.6 199 29.6
BcaC03g17685 Brassica carinata HOM05D002679 ORTHO05D012984 6.7e-08 61.6 139 36.7
BcaC06g33119 Brassica carinata HOM05D002679 ORTHO05D012452 6.7e-08 61.6 85 42.4
BcaC06g33274 Brassica carinata HOM05D002679 ORTHO05D012452 6.7e-08 61.6 85 42.4
BcaC08g43156 Brassica carinata HOM05D002679 ORTHO05D012311 6.7e-08 61.6 184 31.0
BolC6t35570H Brassica oleracea HOM05D002679 ORTHO05D012311 6.7e-08 61.6 184 31.0
Carub.0001s2632 Capsella rubella HOM05D002679 ORTHO05D010703 6.7e-08 61.6 92 39.1
AL7G47200 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 8.7e-08 61.2 170 30.0
BraA03t14032Z Brassica rapa HOM05D002679 ORTHO05D012452 1.1e-07 60.8 85 42.4
AL3G49080 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 1.5e-07 60.5 86 41.9
AT1G23960 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 2.5e-07 59.7 90 38.9
BcaC05g26430 Brassica carinata HOM05D002679 ORTHO05D012311 2.5e-07 59.7 182 31.9
BcaB02g08996 Brassica carinata HOM05D002679 ORTHO05D014105 3.3e-07 59.3 175 32.0
AT3G25080 Arabidopsis thaliana HOM05D002679 ORTHO05D014856 4.3e-07 58.9 79 43.0
Carub.0006s1922 Capsella rubella HOM05D002679 ORTHO05D014856 4.3e-07 58.9 168 32.1
AL1G40550 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 5.6e-07 58.5 180 32.8
A02p02590 Brassica napus HOM05D018487 ORTHO05D011194 4.8e-06 55.5 178 29.2
BraA02t05227Z Brassica rapa HOM05D002679 ORTHO05D011194 4.8e-06 55.5 178 29.2
C02p06810 Brassica napus HOM05D002679 ORTHO05D011194 8.1e-06 54.7 178 29.2


User provided reference genes

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