Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p10750 Brassica napus HOM05D005953 ORTHO05D004056 4.1e-29 131.0 78 100.0
BolC8t48747H Brassica oleracea HOM05D005953 ORTHO05D004056 4.1e-29 131.0 78 100.0
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 6.5e-27 123.6 78 92.3
BraA08t33974Z Brassica rapa HOM05D005953 ORTHO05D004056 2.3e-24 115.2 78 92.3
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 2.0e-20 102.1 81 74.1
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 2.0e-20 102.1 81 74.1
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 1.5e-18 95.9 81 70.4
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 1.5e-18 95.9 78 73.1
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 6.1e-17 90.5 81 65.4
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 1.8e-16 89.0 81 66.7
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 5.2e-16 87.4 81 65.4
AL7G24310 Arabidopsis lyrata HOM05D005953 ORTHO05D004056 8.9e-16 86.7 81 70.4
BcaC09g50494 Brassica carinata HOM05D005953 ORTHO05D004056 1.3e-14 82.8 81 64.2
A01p19690 Brassica napus HOM05D005953 ORTHO05D004056 1.3e-14 82.8 81 64.2
BraA01t01902Z Brassica rapa HOM05D005953 ORTHO05D004056 1.3e-14 82.8 81 64.2
BcaNung01582 Brassica carinata HOM05D005953 ORTHO05D004056 1.1e-10 69.7 81 58.0
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 1.8e-08 62.4 79 51.9
Thhalv10026705m.g Eutrema salsugineum HOM05D005953 ORTHO05D004056 3.1e-08 61.6 82 53.7
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 2.0e-07 58.9 78 51.3
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 3.4e-07 58.2 78 48.7
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 1.3e-06 56.2 82 47.6
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 1.3e-06 56.2 81 49.4
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 1.3e-06 56.2 79 44.3
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 1.7e-06 55.8 78 46.2
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 2.2e-06 55.5 78 42.3
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 3.7e-06 54.7 78 47.4
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 6.4e-06 53.9 78 43.6
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 6.4e-06 53.9 79 45.6
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 6.4e-06 53.9 79 49.4
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 8.3e-06 53.5 81 48.1
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 8.3e-06 53.5 79 49.4


User provided reference genes

Program Settings