Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 1.1e-95 353.2 171 100.0
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 1.1e-95 353.2 171 100.0
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 2.8e-91 338.6 171 95.9
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 1.0e-88 330.1 171 94.7
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 6.4e-67 257.7 177 74.6
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 2.8e-54 215.7 180 61.7
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 2.3e-53 212.6 180 61.7
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 6.8e-53 211.1 180 61.1
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 6.8e-53 211.1 180 61.1
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 6.8e-53 211.1 180 61.1
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 6.8e-53 211.1 180 61.1
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 6.8e-53 211.1 180 61.1
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-52 210.3 178 62.4
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-52 210.3 179 62.0
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 1.2e-52 210.3 179 62.0
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 1.5e-52 209.9 180 61.1
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 2.0e-52 209.5 178 62.4
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 2.6e-52 209.1 178 62.4
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 3.4e-52 208.8 179 60.9
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 3.4e-52 208.8 182 59.3
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 3.4e-52 208.8 182 59.3
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 3.4e-52 208.8 182 59.3
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 4.4e-52 208.4 183 58.5
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 4.4e-52 208.4 180 62.8
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 5.8e-52 208.0 178 61.8
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 5.8e-52 208.0 178 61.8
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 5.8e-52 208.0 180 60.6
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 9.9e-52 207.2 180 60.6
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 1.3e-51 206.8 183 59.0
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 1.3e-51 206.8 180 60.0
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 1.3e-51 206.8 183 59.0
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 3.7e-51 205.3 183 58.5
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 8.3e-51 204.1 181 58.6
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 1.1e-50 203.8 180 59.4
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 4.1e-50 201.8 179 58.1
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 3.5e-49 198.7 187 58.3
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 3.5e-49 198.7 187 58.3
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 3.5e-49 198.7 187 58.3
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 3.5e-49 198.7 187 58.3
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 4.6e-49 198.4 173 60.1
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 7.8e-49 197.6 183 57.9
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 3.0e-48 195.7 205 53.2
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 3.9e-48 195.3 198 53.0
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 8.6e-48 194.1 173 61.3
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.5e-47 193.4 173 61.3
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 4.7e-46 188.3 179 57.0
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 6.2e-46 188.0 90 98.9
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 1.1e-45 187.2 177 56.5
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 1.8e-45 186.4 198 51.5
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.2e-44 183.7 166 58.4
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.5e-44 183.3 174 59.8
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.0e-44 183.0 175 56.6
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 3.4e-44 182.2 173 58.4
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 5.8e-44 181.4 185 54.6
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 5.8e-44 181.4 173 57.2
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 9.9e-44 180.6 178 56.7
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.3e-43 180.3 173 57.2
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 8.4e-43 177.6 176 56.8
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 3.2e-42 175.6 171 57.9
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 2.7e-41 172.6 171 56.1
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 5.1e-40 168.3 173 54.9
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 1.5e-39 166.8 173 54.3
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 1.5e-39 166.8 173 54.3
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 6.2e-38 161.4 194 49.0
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 8.1e-38 161.0 173 52.6
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 1.8e-37 159.8 139 61.9
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 3.1e-37 159.1 171 54.4
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.2e-36 157.1 173 52.0
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 3.4e-36 155.6 164 51.2
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.3e-35 153.7 143 59.4
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.7e-32 143.3 167 50.3
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.3e-30 137.1 165 47.3
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 5.3e-29 131.7 168 48.8
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 9.0e-29 131.0 162 48.8
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.5e-28 130.2 167 46.7
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.8e-28 128.3 162 48.1
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.8e-28 128.3 162 48.1
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.8e-28 128.3 162 48.1
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 4.9e-27 125.2 168 47.6
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.9e-27 125.2 162 46.9
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.9e-26 123.2 162 46.9
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.4e-26 121.7 161 45.3
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 9.3e-26 120.9 163 46.0
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 7.9e-25 117.9 111 54.1
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 9.6e-23 110.9 111 52.3
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.0e-19 100.9 161 41.0
BcaB08g35832 Brassica carinata HOM05D007475 ORTHO05D009529 1.7e-19 100.1 130 48.5
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 1.6e-17 93.6 162 38.9
Sp7g25110 Schrenkiella parvula HOM05D007475 ORTHO05D009529 2.1e-17 93.2 75 68.0
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.1e-17 93.2 130 43.8
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 8.7e-16 87.8 161 36.6
BcaC09g50613 Brassica carinata HOM05D007475 ORTHO05D009529 1.5e-15 87.0 62 74.2
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 9.6e-15 84.3 168 36.9
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 9.6e-15 84.3 167 36.5
BcaC09g50611 Brassica carinata HOM05D007475 ORTHO05D009529 2.1e-14 83.2 62 72.6
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 6.2e-14 81.6 164 34.8
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 1.5e-12 77.0 158 31.6
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 4.5e-12 75.5 159 35.2
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 2.2e-11 73.2 172 32.0
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 2.2e-11 73.2 158 32.9
BcaNung00181 Brassica carinata HOM05D007475 ORTHO05D009529 3.9e-08 62.4 42 69.0
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 5.1e-08 62.0 158 29.7
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 6.7e-08 61.6 151 35.8
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 1.6e-06 57.0 154 28.6
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 2.2e-06 56.6 149 25.5
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.8e-06 55.5 157 29.9
Potri.011G134400 Populus trichocarpa HOM05D006536 ORTHO05D005877 4.8e-06 55.5 155 34.2
Potri.011G134500 Populus trichocarpa HOM05D006536 ORTHO05D005877 4.8e-06 55.5 155 34.2
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 6.3e-06 55.1 153 30.7
COL.COLO4_09580 Corchorus olitorius HOM05D015826 ORTHO05D005877 8.2e-06 54.7 152 25.7


User provided reference genes

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