Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p10050 Brassica napus HOM05D009587 ORTHO05D004912 6.2e-61 237.3 120 100.0
BolC8t48684H Brassica oleracea HOM05D009587 ORTHO05D004912 6.2e-61 237.3 120 100.0
BcaC07g38259 Brassica carinata HOM05D009587 ORTHO05D004912 6.9e-60 233.8 120 99.2
A08p20650 Brassica napus HOM05D009587 ORTHO05D004912 2.8e-53 211.8 122 91.8
BraA08t34019Z Brassica rapa HOM05D009587 ORTHO05D004912 3.0e-47 191.8 132 84.1
Sp7g24900 Schrenkiella parvula HOM05D009587 ORTHO05D004912 3.3e-46 188.3 132 79.5
BcaB03g12516 Brassica carinata HOM05D009587 ORTHO05D004912 2.4e-44 182.2 126 77.8
CARHR234560 Cardamine hirsuta HOM05D009587 ORTHO05D004912 5.5e-41 171.0 129 72.9
AT4G26960 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 2.0e-38 162.5 132 72.0
Carub.0007s1391 Capsella rubella HOM05D009587 ORTHO05D004912 1.2e-35 153.3 136 68.4
AL7G25880 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 1.5e-30 136.3 105 69.5
CARHR268310 Cardamine hirsuta HOM05D009587 ORTHO05D004912 1.2e-24 116.7 134 53.7
Sp6g16920 Schrenkiella parvula HOM05D009587 ORTHO05D004912 1.6e-24 116.3 139 52.5
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 2.7e-24 115.5 126 57.9
Aa31LG5G12020 Aethionema arabicum HOM05D009587 ORTHO05D004912 2.3e-23 112.5 127 55.1
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 5.2e-23 111.3 133 54.1
Aa31LG3G10880 Aethionema arabicum HOM05D009587 ORTHO05D004912 8.8e-23 110.5 125 54.4
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 1.2e-22 110.2 133 54.1
BraA03t10733Z Brassica rapa HOM05D009587 ORTHO05D004912 1.5e-22 109.8 118 53.4
Carub.0008s1526 Capsella rubella HOM05D009587 ORTHO05D004912 1.3e-21 106.7 134 51.5
C03p16740 Brassica napus HOM05D009587 ORTHO05D004912 6.3e-21 104.4 117 53.8
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 1.1e-20 103.6 110 55.5
A03p14360 Brassica napus HOM05D009587 ORTHO05D004912 1.1e-20 103.6 118 52.5
BolC3t14094H Brassica oleracea HOM05D009587 ORTHO05D004912 1.1e-20 103.6 117 53.0
AT5G54970 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 1.4e-20 103.2 120 52.5
AL8G30440 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 2.0e-19 99.4 132 48.5
Sp1g13240 Schrenkiella parvula HOM05D009587 ORTHO05D004912 1.0e-18 97.1 80 70.0
BcaB01g04338 Brassica carinata HOM05D009587 ORTHO05D004912 1.2e-16 90.1 117 47.9
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 1.6e-16 89.7 135 45.2
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 4.0e-15 85.1 126 45.2
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 2.0e-11 72.8 131 41.2
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 3.8e-10 68.6 135 36.3
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 8.6e-10 67.4 136 36.0
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 2.5e-09 65.9 139 38.8
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 4.2e-09 65.1 110 42.7
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 7.2e-09 64.3 139 36.7
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 7.2e-09 64.3 136 34.6
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.1e-08 62.8 139 36.7
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 2.1e-08 62.8 139 36.7
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 4.7e-08 61.6 130 39.2
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 4.7e-08 61.6 130 39.2
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 6.1e-08 61.2 137 38.0
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 6.1e-08 61.2 114 44.7
BcaB01g04337 Brassica carinata HOM05D009587 ORTHO05D004912 1.8e-07 59.7 32 81.2
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 2.3e-07 59.3 123 38.2
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 3.0e-07 58.9 103 38.8
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 5.2e-07 58.2 85 42.4
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 6.8e-07 57.8 138 36.2
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 8.9e-07 57.4 126 38.1
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 8.9e-07 57.4 126 38.1
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 1.2e-06 57.0 102 38.2
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 2.0e-06 56.2 96 40.6
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 3.4e-06 55.5 124 34.7
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 4.4e-06 55.1 115 35.7
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 4.4e-06 55.1 101 37.6
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 4.4e-06 55.1 121 34.7
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 5.7e-06 54.7 96 39.6
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 7.5e-06 54.3 98 41.8
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 9.8e-06 53.9 101 37.6
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 9.8e-06 53.9 101 37.6


User provided reference genes

Program Settings