Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-148 528.9 284 100.0
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 4.5e-142 508.1 294 94.6
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-127 460.3 252 97.6
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 2.6e-81 306.2 253 73.5
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-79 300.1 291 66.3
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-76 289.7 251 68.5
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 4.3e-76 288.9 252 70.6
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 4.3e-76 288.9 289 62.3
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 9.5e-76 287.7 289 61.9
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 2.1e-75 286.6 294 62.2
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 2.8e-75 286.2 266 67.3
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 8.1e-75 284.6 291 62.2
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-73 280.8 293 61.4
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-73 280.8 289 61.9
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 7.6e-73 278.1 342 55.0
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 9.9e-73 277.7 289 63.0
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 2.2e-72 276.6 289 60.6
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 2.2e-72 276.6 289 60.6
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 1.6e-70 270.4 332 55.1
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 1.0e-69 267.7 313 56.5
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 3.0e-69 266.2 356 52.8
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 8.9e-66 254.6 237 67.9
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 1.2e-65 254.2 219 68.9
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-64 250.8 260 63.5
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 3.8e-64 249.2 266 62.0
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-63 246.9 265 61.9
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 2.5e-60 236.5 289 56.7
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-58 230.7 258 59.3
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 3.1e-58 229.6 214 65.9
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 5.3e-58 228.8 149 83.2
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 1.2e-57 227.6 249 61.4
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 7.6e-57 224.9 192 70.3
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-56 224.2 205 69.3
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 2.9e-56 223.0 144 83.3
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 8.4e-56 221.5 259 58.7
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 1.1e-55 221.1 258 57.4
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-55 220.7 259 58.7
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-54 217.2 183 69.4
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 6.0e-54 215.3 211 63.5
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 3.9e-53 212.6 234 60.7
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 3.9e-53 212.6 136 83.8
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 3.6e-51 206.1 291 51.9
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-50 204.1 252 55.2
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 2.4e-50 203.4 258 53.9
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 2.4e-50 203.4 307 49.8
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-50 203.4 222 59.0
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 2.0e-49 200.3 254 57.1
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 2.9e-48 196.4 249 53.8
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 1.9e-47 193.7 140 78.6
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 5.5e-47 192.2 290 50.0
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 9.3e-47 191.4 293 48.5
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 1.2e-46 191.0 152 73.0
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 4.6e-46 189.1 120 84.2
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-45 188.0 229 57.2
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 3.0e-45 186.4 252 52.8
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-44 183.0 149 73.8
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 4.3e-44 182.6 254 51.6
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 5.6e-44 182.2 194 61.9
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-43 181.0 256 50.8
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-43 180.3 228 55.3
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 3.7e-43 179.5 198 60.1
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 4.8e-43 179.1 330 42.4
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 3.1e-42 176.4 181 61.9
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 4.0e-42 176.0 202 58.4
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 4.0e-42 176.0 176 64.2
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 5.3e-42 175.6 335 42.4
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 5.3e-42 175.6 119 81.5
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 1.0e-40 171.4 256 49.6
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 1.3e-40 171.0 330 41.5
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 2.2e-40 170.2 119 79.0
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 2.9e-40 169.9 133 73.7
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-39 167.9 148 68.9
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-39 166.8 202 56.9
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 9.3e-39 164.9 129 73.6
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 9.3e-39 164.9 248 49.6
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-38 164.5 252 48.0
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 1.3e-37 161.0 170 56.5
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 1.8e-37 160.6 182 58.2
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 6.7e-37 158.7 306 43.1
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 4.3e-36 156.0 277 46.2
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 2.1e-35 153.7 152 61.2
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 2.1e-35 153.7 148 66.2
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 2.1e-35 153.7 148 64.9
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 2.8e-35 153.3 174 59.8
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 3.7e-35 152.9 283 43.5
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 1.4e-34 151.0 252 47.6
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 1.4e-34 151.0 295 42.7
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 4.1e-34 149.4 301 41.9
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 9.0e-34 148.3 254 45.7
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 3.4e-33 146.4 282 43.6
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 4.5e-33 146.0 260 45.0
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 5.9e-33 145.6 152 59.9
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 3.8e-32 142.9 244 45.1
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 8.5e-32 141.7 313 39.6
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 1.9e-31 140.6 264 43.9
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 5.5e-31 139.0 127 68.5
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 9.3e-31 138.3 270 42.6
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 3.6e-30 136.3 137 65.7
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.3e-29 134.4 215 51.2
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 2.3e-29 133.7 145 60.0
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 3.0e-29 133.3 146 59.6
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 8.7e-29 131.7 236 45.3
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 8.7e-29 131.7 176 51.7
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 8.7e-29 131.7 127 63.8
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 1.1e-28 131.3 306 39.2
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 1.9e-28 130.6 234 45.7
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 7.4e-28 128.6 193 50.3
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 7.4e-28 128.6 193 50.3
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 1.3e-27 127.9 127 64.6
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 1.3e-27 127.9 96 76.0
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-27 127.9 179 54.7
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 2.2e-27 127.1 187 47.6
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 6.3e-27 125.6 356 34.0
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 8.2e-27 125.2 215 44.2
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 9.0e-26 121.7 253 43.1
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 1.2e-25 121.3 179 51.4
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 5.9e-25 119.0 129 60.5
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 8.5e-24 115.2 108 63.0
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 5.5e-23 112.5 132 56.1
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 4.6e-22 109.4 238 41.6
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-21 108.2 99 66.7
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 7.4e-20 102.1 235 40.0
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 8.2e-19 98.6 210 41.9
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 3.1e-18 96.7 203 43.3
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 5.9e-17 92.4 87 59.8
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 1.0e-16 91.7 66 75.8
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 1.3e-16 91.3 163 47.9
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 4.2e-15 86.3 101 57.4
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 4.2e-15 86.3 124 52.4
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 4.2e-15 86.3 121 52.9
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 5.5e-15 85.9 120 53.3
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 1.2e-14 84.7 135 48.9
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 3.6e-14 83.2 78 62.8
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 6.1e-14 82.4 78 61.5
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-13 81.3 71 64.8
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 1.4e-13 81.3 117 52.1
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 2.8e-11 73.6 209 34.4
A03p68630 Brassica napus HOM05D008277 ORTHO05D100657 4.8e-11 72.8 139 40.3
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 6.3e-11 72.4 83 56.6
A05p23320 Brassica napus HOM05D008277 ORTHO05D000199 7.0e-10 68.9 139 39.6
C04p13490 Brassica napus HOM05D008277 ORTHO05D100146 7.0e-10 68.9 139 40.3
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 1.2e-09 68.2 234 32.1
A04p09670 Brassica napus HOM05D008277 ORTHO05D016104 1.6e-09 67.8 139 38.8
A05p29410 Brassica napus HOM05D008277 ORTHO05D016104 2.0e-09 67.4 140 39.3
A06p28060 Brassica napus HOM05D010967 ORTHO05D017683 2.6e-09 67.0 87 54.0
A09p35600 Brassica napus HOM05D010967 ORTHO05D017683 2.6e-09 67.0 88 53.4
A01p19980 Brassica napus HOM05D010967 ORTHO05D017683 3.5e-09 66.6 88 53.4
BraA01t02827Z Brassica rapa HOM05D010967 ORTHO05D017683 3.5e-09 66.6 88 53.4
A05p23080 Brassica napus HOM05D010967 ORTHO05D017683 5.9e-09 65.9 88 53.4
A01p34440 Brassica napus HOM05D010967 ORTHO05D017683 7.7e-09 65.5 88 53.4
A05p17100 Brassica napus HOM05D010967 ORTHO05D017683 7.7e-09 65.5 88 53.4
A09p48280 Brassica napus HOM05D010967 ORTHO05D017683 7.7e-09 65.5 88 53.4
BolC9t54428H Brassica oleracea HOM05D004489 ORTHO05D010056 7.7e-09 65.5 48 77.1
A03p58810 Brassica napus HOM05D010967 ORTHO05D017683 6.5e-08 62.4 86 51.2
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 8.5e-08 62.0 44 65.9
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 8.5e-08 62.0 66 60.6
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 8.5e-08 62.0 53 66.0
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 3.2e-07 60.1 66 57.6
BraA05t21163Z Brassica rapa HOM05D010967 ORTHO05D108496 3.2e-07 60.1 66 62.1
BraA02t08312Z Brassica rapa HOM05D010967 ORTHO05D108770 5.5e-07 59.3 62 64.5
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 7.2e-07 58.9 55 60.0
BraA07t28506Z Brassica rapa HOM05D010967 ORTHO05D108156 9.4e-07 58.5 88 50.0
BcaB03g16365 Brassica carinata HOM05D000706 ORTHO05D001633 1.6e-06 57.8 153 39.2
BolC8t48749H Brassica oleracea HOM05D004489 ORTHO05D105588 6.1e-06 55.8 31 83.9
BolC6t37761H Brassica oleracea HOM05D004489 ORTHO05D104721 8.0e-06 55.5 147 39.5


User provided reference genes

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