Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p07680 Brassica napus HOM05D000732 ORTHO05D001037 2.6e-121 438.7 225 100.0
BolC8t47614H Brassica oleracea HOM05D000732 ORTHO05D001037 2.6e-121 438.7 225 100.0
BcaC01g00955 Brassica carinata HOM05D000732 ORTHO05D001037 2.5e-111 405.6 225 93.8
C03p86320 Brassica napus HOM05D000732 ORTHO05D001037 3.6e-110 401.7 225 93.3
BraA05t20305Z Brassica rapa HOM05D000732 ORTHO05D001037 3.3e-71 272.3 184 78.8
A05p13680 Brassica napus HOM05D000732 ORTHO05D001037 4.3e-71 271.9 184 78.8
BcaB02g10423 Brassica carinata HOM05D000732 ORTHO05D001037 8.1e-70 267.7 182 77.5
BolC3t20923H Brassica oleracea HOM05D000732 ORTHO05D001037 8.1e-70 267.7 147 95.2
BcaB02g10424 Brassica carinata HOM05D000732 ORTHO05D001037 4.0e-69 265.4 182 76.9
BcaC02g11298 Brassica carinata HOM05D000732 ORTHO05D001037 2.2e-67 259.6 183 75.4
C04p17880 Brassica napus HOM05D000732 ORTHO05D001037 2.2e-67 259.6 183 75.4
BolC4t23336H Brassica oleracea HOM05D000732 ORTHO05D001037 2.2e-67 259.6 183 75.4
Sp4g14280 Schrenkiella parvula HOM05D000732 ORTHO05D001037 2.6e-60 236.1 181 70.2
CARHR125630 Cardamine hirsuta HOM05D000732 ORTHO05D001037 1.9e-58 229.9 182 67.0
Thhalv10016478m.g Eutrema salsugineum HOM05D000732 ORTHO05D001037 3.5e-57 225.7 182 68.7
AT2G31920 Arabidopsis thaliana HOM05D000732 ORTHO05D001037 1.7e-56 223.4 183 65.0
AL4G27220 Arabidopsis lyrata HOM05D000732 ORTHO05D001037 4.3e-55 218.8 182 65.4
Carub.0004s1322 Capsella rubella HOM05D000732 ORTHO05D001037 4.3e-55 218.8 181 66.3
A08p18310 Brassica napus HOM05D000732 ORTHO05D001037 2.2e-51 206.5 175 68.6
BraA08t33788Z Brassica rapa HOM05D000732 ORTHO05D001037 2.2e-51 206.5 175 68.6
A09p56870 Brassica napus HOM05D000732 ORTHO05D001037 1.1e-50 204.1 118 92.4
Aa31LG5G5100 Aethionema arabicum HOM05D000732 ORTHO05D001037 1.7e-43 180.3 188 57.4
THA.LOC104826177 Tarenaya hassleriana HOM05D000732 ORTHO05D001037 3.7e-30 136.0 187 46.5
Cpa.g.c29923.4 Carica papaya HOM05D000732 ORTHO05D001037 2.7e-25 119.8 194 40.2
Atru.chr11.2716 Acer truncatum HOM05D000732 ORTHO05D001037 9.7e-23 111.3 195 37.9
QL04p002020 Quercus lobata HOM05D000732 ORTHO05D001037 8.2e-22 108.2 201 37.3
Glyma.08G158800 Glycine max HOM05D000732 ORTHO05D001037 1.8e-21 107.1 202 38.6
TAR636G1042 Trochodendron aralioides HOM05D000732 ORTHO05D001037 6.9e-21 105.1 195 36.4
ClCG09G003630 Citrullus lanatus HOM05D000732 ORTHO05D001037 1.5e-20 104.0 189 37.6
Prupe.2G001500 Prunus persica HOM05D000732 ORTHO05D001037 2.0e-20 103.6 181 37.6
Cfa010698 Carpinus fangiana HOM05D000732 ORTHO05D001037 3.4e-20 102.8 192 35.4
Ca_03225_v3 Cicer arietinum L. HOM05D000732 ORTHO05D001037 3.4e-20 102.8 199 35.2
Haze_03278 Corylus avellana HOM05D000732 ORTHO05D001037 4.5e-20 102.4 192 35.9
arahy.Tifrunner.gnm1.ann1.A7IX4D Arachis hypogaea HOM05D000732 ORTHO05D001037 7.7e-20 101.7 199 34.7
Glyma.15G267500 Glycine max HOM05D000732 ORTHO05D001037 1.0e-19 101.3 200 37.0
Lj3g0014114 Lotus japonicus HOM05D000732 ORTHO05D001037 1.3e-19 100.9 204 33.3
GSVIVG01005996001 Vitis vinifera HOM05D000732 ORTHO05D001037 1.3e-19 100.9 191 36.1
Dinv43506 Davidia involucrata HOM05D000732 ORTHO05D001037 2.2e-19 100.1 193 37.3
arahy.Tifrunner.gnm1.ann1.ZC37QS Arachis hypogaea HOM05D000732 ORTHO05D001037 2.9e-19 99.8 197 34.0
Phvul.005G042800 Phaseolus vulgaris HOM05D000732 ORTHO05D001037 2.9e-19 99.8 201 35.8
Sed0012371 Sechium edule HOM05D000732 ORTHO05D001037 2.9e-19 99.8 178 34.3
TWI09G0078 Tripterygium wilfordii HOM05D000732 ORTHO05D001037 2.9e-19 99.8 192 32.8
Oeu041508.1 Olea europaea HOM05D000732 ORTHO05D001037 8.5e-19 98.2 193 36.8
TPR.G16159 Trifolium pratense HOM05D000732 ORTHO05D001037 1.4e-18 97.4 192 35.4
CANSAT11G0131 Cannabis sativa HOM05D000732 ORTHO05D001037 1.9e-18 97.1 199 33.7
VMungo1080G1241 Vigna mungo HOM05D000732 ORTHO05D001037 2.5e-18 96.7 202 36.1
MELO3C023499.2 Cucumis melo HOM05D000732 ORTHO05D001037 3.2e-18 96.3 175 35.4
Lalb_Chr25g0283761 Lupinus albus HOM05D000732 ORTHO05D001037 3.2e-18 96.3 207 34.3
TAR633G0810 Trochodendron aralioides HOM05D000732 ORTHO05D001037 4.2e-18 95.9 194 33.0
Cc02_g26770 Coffea canephora HOM05D000732 ORTHO05D001037 5.5e-18 95.5 194 34.5
DCAR_029583 Daucus carota HOM05D000732 ORTHO05D001037 5.5e-18 95.5 199 31.7
Dinv43947 Davidia involucrata HOM05D000732 ORTHO05D001037 1.2e-17 94.4 193 34.7
Psat1g129440 Pisum sativum HOM05D000732 ORTHO05D001037 1.2e-17 94.4 231 31.6
CsaV3_7G031550 Cucumis sativus L. HOM05D000732 ORTHO05D001037 2.1e-17 93.6 175 34.9
Medtr2g062300 Medicago truncatula HOM05D000732 ORTHO05D001037 3.6e-17 92.8 202 33.7
CAN.G1361.8 Capsicum annuum HOM05D000732 ORTHO05D001037 6.1e-17 92.0 194 34.5
Migut.N01653 Erythranthe guttata HOM05D000732 ORTHO05D001037 1.8e-16 90.5 181 33.7
Manes.10G153200 Manihot esculenta HOM05D000732 ORTHO05D001037 3.9e-16 89.4 190 35.3
MBI04_g09727_MAGBIO Magnolia biondii HOM05D000732 ORTHO05D001037 1.1e-15 87.8 193 34.2
Aqoxy2G00541 Aquilegia oxysepala HOM05D000732 ORTHO05D001037 4.4e-15 85.9 192 35.4
Lsat_1_v5_gn_1_87481 Lactuca sativa HOM05D000732 ORTHO05D001037 1.3e-14 84.3 177 35.0
Lj9A619T35 Lonicera japonica HOM05D000732 ORTHO05D001037 2.8e-14 83.2 194 32.5
Solyc01g081640.4 Solanum lycopersicum HOM05D000732 ORTHO05D001037 2.8e-14 83.2 195 31.8
Sopen01g033190 Solanum pennellii HOM05D000732 ORTHO05D001037 2.8e-14 83.2 193 31.6
HanXRQChr01g0017391 Helianthus annuus HOM05D000732 ORTHO05D001037 3.7e-14 82.8 188 33.0
PGSC0003DMG400031129 Solanum tuberosum HOM05D000732 ORTHO05D001037 4.8e-14 82.4 193 31.6
Nn2g15828 Nelumbo nucifera HOM05D000732 ORTHO05D001037 1.1e-13 81.3 191 31.9
PSO339G4027 Papaver somniferum HOM05D000732 ORTHO05D001037 2.4e-13 80.1 188 31.9
PSO384G1576 Papaver somniferum HOM05D000732 ORTHO05D001037 4.1e-13 79.3 188 31.9
Sabra09G0016400 Salix brachista HOM05D000732 ORTHO05D001037 2.0e-12 77.0 191 29.3
vmacro22283 Vaccinium macrocarpon HOM05D000732 ORTHO05D001037 3.5e-12 76.3 174 33.9
Potri.009G024800 Populus trichocarpa HOM05D000732 ORTHO05D001037 4.5e-12 75.9 189 29.1
MSTRG.28107 Avicennia marina HOM05D000732 ORTHO05D001037 7.7e-12 75.1 176 33.0
SGA_v2.0_scaffold510G52621 Striga asiatica HOM05D000732 ORTHO05D001037 1.0e-11 74.7 177 28.8
Duzib212G0594 Durio zibethinus HOM05D000732 ORTHO05D001037 2.1e-09 67.0 201 28.4
Aqoxy2G04130 Aquilegia oxysepala HOM05D000732 ORTHO05D001037 1.0e-08 64.7 197 27.4
BcaB03g13315 Brassica carinata HOM05D000732 ORTHO05D001037 2.3e-08 63.5 185 28.1
Cfa015199 Carpinus fangiana HOM05D000732 ORTHO05D001037 3.0e-08 63.2 204 27.0
Sabra07G0106800 Salix brachista HOM05D000732 ORTHO05D001037 4.0e-08 62.8 195 27.7
Sabra07G0118700 Salix brachista HOM05D000732 ORTHO05D001037 4.0e-08 62.8 195 28.2
COL.COLO4_08221 Corchorus olitorius HOM05D000732 ORTHO05D001037 6.7e-08 62.0 200 26.5
Manes.04G047109 Manihot esculenta HOM05D000732 ORTHO05D001037 6.7e-08 62.0 197 28.4
Potri.007G131600 Populus trichocarpa HOM05D000732 ORTHO05D001037 6.7e-08 62.0 200 30.0
Potri.017G026200 Populus trichocarpa HOM05D000732 ORTHO05D001037 6.7e-08 62.0 194 27.8
Prupe.1G198600 Prunus persica HOM05D000732 ORTHO05D001037 6.7e-08 62.0 201 26.9
MSTRG.24573 Avicennia marina HOM05D000732 ORTHO05D001037 1.1e-07 61.2 196 25.5
Haze_01450 Corylus avellana HOM05D000732 ORTHO05D001037 1.1e-07 61.2 204 26.0
CsaV3_6G006820 Cucumis sativus L. HOM05D000732 ORTHO05D001037 1.1e-07 61.2 205 25.9
Sabra17G0000900 Salix brachista HOM05D000732 ORTHO05D001037 1.1e-07 61.2 197 29.4
Ca_20803_v3 Cicer arietinum L. HOM05D000732 ORTHO05D001037 1.5e-07 60.8 206 26.7
Sabra17G0016000 Salix brachista HOM05D000732 ORTHO05D001037 1.5e-07 60.8 195 30.3
Manes.04G047100 Manihot esculenta HOM05D000732 ORTHO05D001037 2.6e-07 60.1 197 27.9
CiPaw.01G095800 Carya illinoinensis HOM05D000732 ORTHO05D001037 3.3e-07 59.7 200 27.0
ClCG06G000970 Citrullus lanatus HOM05D000732 ORTHO05D001037 3.3e-07 59.7 209 25.4
MELO3C022442.2 Cucumis melo HOM05D000732 ORTHO05D001037 3.3e-07 59.7 205 25.4
Migut.N03096 Erythranthe guttata HOM05D000732 ORTHO05D001037 3.3e-07 59.7 196 26.5
Lalb_Chr22g0352061 Lupinus albus HOM05D000732 ORTHO05D001037 4.4e-07 59.3 203 26.6
Aa31LG2G18700 Aethionema arabicum HOM05D000732 ORTHO05D001037 7.5e-07 58.5 201 28.4
Carub.0001s0810 Capsella rubella HOM05D000732 ORTHO05D001037 7.5e-07 58.5 210 26.7
Nn7g37579 Nelumbo nucifera HOM05D000732 ORTHO05D001037 7.5e-07 58.5 207 23.7
AT1G08760 Arabidopsis thaliana HOM05D000732 ORTHO05D001037 9.7e-07 58.2 200 29.0
Manes.11G125500 Manihot esculenta HOM05D000732 ORTHO05D001037 1.3e-06 57.8 195 26.2
unitig_578.g16257 Utricularia gibba HOM05D000732 ORTHO05D001037 1.3e-06 57.8 194 22.2
GSVIVG01010850001 Vitis vinifera HOM05D000732 ORTHO05D001037 1.3e-06 57.8 197 25.4
C05p06830 Brassica napus HOM05D004756 ORTHO05D005793 1.7e-06 57.4 201 28.9
CDE09G0726 Ceratophyllum demersum HOM05D000732 ORTHO05D001037 1.7e-06 57.4 195 29.7
Glyma.15G028800 Glycine max HOM05D000732 ORTHO05D001037 1.7e-06 57.4 202 26.7
Peaxi162Scf00504g00098 Petunia axillaris HOM05D000732 ORTHO05D001037 1.7e-06 57.4 202 24.3
BolC5t29442H Brassica oleracea HOM05D000732 ORTHO05D001037 2.2e-06 57.0 201 28.9
QL10p051216 Quercus lobata HOM05D000732 ORTHO05D001037 2.2e-06 57.0 196 25.5
BcaC07g41927 Brassica carinata HOM05D000732 ORTHO05D001037 2.8e-06 56.6 199 28.6
Ciclev10018994m.g Citrus clementina HOM05D000732 ORTHO05D001037 2.8e-06 56.6 202 26.2
Lsat_1_v5_gn_3_109761 Lactuca sativa HOM05D000732 ORTHO05D001037 2.8e-06 56.6 176 27.8
Lalb_Chr03g0026011 Lupinus albus HOM05D000732 ORTHO05D001037 2.8e-06 56.6 202 28.2
Nitab4.5_0002722g0020 Nicotiana tabacum HOM05D000732 ORTHO05D001037 2.8e-06 56.6 200 24.5
Nn1g09585 Nelumbo nucifera HOM05D000732 ORTHO05D001037 3.7e-06 56.2 202 26.7
Nitab4.5_0001586g0200 Nicotiana tabacum HOM05D000732 ORTHO05D001037 3.7e-06 56.2 200 24.5
BraA06t23776Z Brassica rapa HOM05D000732 ORTHO05D001037 4.8e-06 55.8 202 28.2
Duzib151G0684 Durio zibethinus HOM05D000732 ORTHO05D001037 4.8e-06 55.8 96 34.4
Lsat_1_v5_gn_5_71201 Lactuca sativa HOM05D000732 ORTHO05D001037 4.8e-06 55.8 183 24.6
VMungo1080G0037 Vigna mungo HOM05D000732 ORTHO05D001037 4.8e-06 55.8 210 26.2
AL1G19190 Arabidopsis lyrata HOM05D000732 ORTHO05D001037 6.3e-06 55.5 209 26.8
A06p05660 Brassica napus HOM05D004756 ORTHO05D005793 6.3e-06 55.5 201 28.4
Phvul.011G052900 Phaseolus vulgaris HOM05D000732 ORTHO05D001037 6.3e-06 55.5 205 26.8
Sed0021620 Sechium edule HOM05D000732 ORTHO05D001037 6.3e-06 55.5 204 26.0
CiPaw.02G051800 Carya illinoinensis HOM05D000732 ORTHO05D001037 8.2e-06 55.1 200 24.5
Phvul.005G154300 Phaseolus vulgaris HOM05D000732 ORTHO05D001037 8.2e-06 55.1 204 26.0
RcHm_v2.0_Chr2g0118831 Rosa chinensis HOM05D000732 ORTHO05D001037 8.2e-06 55.1 205 24.4


User provided reference genes

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