Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p07340 Brassica napus HOM05D009395 ORTHO05D011539 1.3e-107 393.7 308 100.0
BolC8t47575H Brassica oleracea HOM05D009395 ORTHO05D011539 1.3e-107 393.7 308 100.0
BcaC07g37300 Brassica carinata HOM05D009395 ORTHO05D011539 4.8e-97 358.6 287 100.0
BraA08t32646Z Brassica rapa HOM05D009395 ORTHO05D011539 3.4e-71 272.7 323 73.4
BcaB04g17589 Brassica carinata HOM05D009395 ORTHO05D011539 3.9e-67 259.2 288 77.4
Sp1g33470 Schrenkiella parvula HOM05D009395 ORTHO05D011539 6.7e-51 205.3 306 64.4
Thhalv10011611m.g Eutrema salsugineum HOM05D009395 ORTHO05D011539 1.8e-43 180.6 359 60.2
CARHR035870 Cardamine hirsuta HOM05D009395 ORTHO05D011539 2.0e-42 177.2 320 66.2
AT1G44191 Arabidopsis thaliana HOM05D009395 ORTHO05D011539 7.5e-42 175.3 363 60.9
Carub.0001s3513 Capsella rubella HOM05D009395 ORTHO05D011539 1.7e-41 174.1 353 60.3
AL1G52230 Arabidopsis lyrata HOM05D009395 ORTHO05D011539 7.0e-40 168.7 366 59.3
AL5G30730 Arabidopsis lyrata HOM05D009395 ORTHO05D011539 1.4e-24 117.9 311 50.8
Sp5g11630 Schrenkiella parvula HOM05D009395 ORTHO05D011539 3.2e-24 116.7 316 52.2
AT3G50580 Arabidopsis thaliana HOM05D009395 ORTHO05D011539 1.3e-22 111.3 310 43.5
BcaB05g23225 Brassica carinata HOM05D009395 ORTHO05D011539 2.5e-21 107.1 324 51.9
Carub.0005s1690 Capsella rubella HOM05D009395 ORTHO05D011539 3.3e-21 106.7 312 45.5
BcaC06g33090 Brassica carinata HOM05D009395 ORTHO05D011539 8.0e-20 102.1 388 49.2
CARHR160090 Cardamine hirsuta HOM05D009395 ORTHO05D011539 1.2e-18 98.2 307 35.5
BcaC06g33305 Brassica carinata HOM05D009395 ORTHO05D011539 2.6e-18 97.1 72 52.8
A03p47820 Brassica napus HOM05D009395 ORTHO05D011539 2.6e-18 97.1 72 52.8
C07p45790 Brassica napus HOM05D009395 ORTHO05D011539 2.6e-18 97.1 72 52.8
BolC7t45101H Brassica oleracea HOM05D009395 ORTHO05D011539 2.6e-18 97.1 72 52.8
BraA03t13892Z Brassica rapa HOM05D009395 ORTHO05D011539 2.6e-18 97.1 72 52.8
A01p24020 Brassica napus HOM05D009395 ORTHO05D011539 7.5e-18 95.5 71 53.5
BcaC09g50038 Brassica carinata HOM05D009395 ORTHO05D011539 1.7e-17 94.4 352 49.4
C01p29700 Brassica napus HOM05D009395 ORTHO05D011539 1.7e-17 94.4 352 48.9
BolC1t02911H Brassica oleracea HOM05D009395 ORTHO05D011539 1.7e-17 94.4 352 48.9
BraA01t02312Z Brassica rapa HOM05D009395 ORTHO05D011539 2.9e-17 93.6 316 50.6
Aa31LG7G15090 Aethionema arabicum HOM05D009395 ORTHO05D011539 1.1e-16 91.7 349 49.0
Aa31LG4G18750 Aethionema arabicum HOM05D009395 ORTHO05D011539 6.8e-11 72.4 54 59.3
THA.LOC104806832 Tarenaya hassleriana HOM05D009395 ORTHO05D011539 3.2e-08 63.5 74 35.1
MD01G1086400 Malus domestica HOM05D009029 ORTHO05D009596 6.0e-07 59.3 88 30.7


User provided reference genes

Program Settings