Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p07130 Brassica napus HOM05D004613 ORTHO05D014940 8.2e-85 317.4 206 100.0
C04p20620 Brassica napus HOM05D000249 ORTHO05D032228 7.5e-46 188.0 206 60.2
BolC8t47558H Brassica oleracea HOM05D004613 ORTHO05D006095 1.9e-33 146.7 192 56.2
C07p27290 Brassica napus HOM05D004613 ORTHO05D040533 1.1e-28 131.0 142 54.2
BolC7t43257H Brassica oleracea HOM05D004613 ORTHO05D040533 1.1e-28 131.0 142 54.2
BcaC07g37284 Brassica carinata HOM05D004613 ORTHO05D006095 2.3e-26 123.2 83 77.1
BolC9t56574H Brassica oleracea HOM05D004613 ORTHO05D014940 4.7e-24 115.5 61 86.9
BolC4t23587H Brassica oleracea HOM05D004613 ORTHO05D006095 1.4e-23 114.0 92 69.6
C09p23030 Brassica napus HOM05D004613 ORTHO05D006095 1.5e-22 110.5 91 65.9
BolC2t08054H Brassica oleracea HOM05D004613 ORTHO05D014940 2.6e-22 109.8 61 82.0
BcaB02g10346 Brassica carinata HOM05D004613 ORTHO05D014940 3.4e-22 109.4 64 81.2
BcaC04g20970 Brassica carinata HOM05D004613 ORTHO05D014940 5.8e-22 108.6 68 77.9
C01p25640 Brassica napus HOM05D004613 ORTHO05D006095 1.3e-21 107.5 159 46.5
BcaC03g15600 Brassica carinata HOM05D008340 ORTHO05D014940 1.4e-20 104.0 68 76.5
BcaB01g02118 Brassica carinata HOM05D004613 ORTHO05D014940 2.4e-20 103.2 72 69.4
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 6.4e-13 78.6 42 85.7
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 2.4e-12 76.6 42 81.0
BcaC02g11915 Brassica carinata HOM05D004613 ORTHO05D014940 7.0e-12 75.1 39 87.2
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 2.7e-11 73.2 42 81.0
BraA06t25731Z Brassica rapa HOM05D030286 ORTHO05D014940 2.7e-11 73.2 93 49.5
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 3.5e-11 72.8 42 81.0
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 3.5e-11 72.8 42 81.0
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 3.5e-11 72.8 42 81.0
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 3.5e-11 72.8 42 81.0
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 1.3e-10 70.9 41 80.5
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 2.1e-08 63.5 52 59.6
BcaC02g11089 Brassica carinata HOM05D000249 ORTHO05D032228 3.1e-07 59.7 32 84.4
BolC1t02515H Brassica oleracea HOM05D004613 ORTHO05D006095 1.2e-06 57.8 77 46.8
BcaC09g50421 Brassica carinata HOM05D004613 ORTHO05D006095 1.5e-06 57.4 53 58.5
Cc02_g32600 Coffea canephora HOM05D004613 ORTHO05D006095 3.4e-06 56.2 80 38.8
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 5.8e-06 55.5 55 50.9
BcaC04g22128 Brassica carinata HOM05D004613 ORTHO05D006095 7.5e-06 55.1 53 56.6
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 7.5e-06 55.1 30 80.0
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 7.5e-06 55.1 30 80.0
Lj9A681T39 Lonicera japonica HOM05D004613 ORTHO05D006095 7.5e-06 55.1 55 45.5
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 9.9e-06 54.7 29 82.8
MSTRG.20469 Avicennia marina HOM05D004613 ORTHO05D006095 9.9e-06 54.7 55 47.3
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 9.9e-06 54.7 55 49.1
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 9.9e-06 54.7 29 82.8


User provided reference genes

Program Settings