Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 7.7e-308 1059.7 543 100.0
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 4.3e-242 841.3 454 94.5
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 1.0e-203 713.8 543 74.2
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 5.5e-189 664.8 543 70.0
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 8.8e-171 604.4 521 68.1
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 1.8e-163 580.1 523 65.4
BcaC06g35412 Brassica carinata HOM05D010893 ORTHO05D016035 6.2e-140 501.9 506 59.7
C07p38420 Brassica napus HOM05D010893 ORTHO05D016035 2.9e-137 493.0 259 95.8
BolC3t13480H Brassica oleracea HOM05D010893 ORTHO05D016035 4.7e-116 422.5 417 63.1
C07p38410 Brassica napus HOM05D010893 ORTHO05D042297 1.0e-73 282.0 155 95.5
BraA03t10175Z Brassica rapa HOM05D010893 ORTHO05D016035 5.1e-62 243.0 310 52.6
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 2.4e-59 234.2 300 49.3
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 8.2e-52 209.1 173 67.1
BolC7t42144H Brassica oleracea HOM05D010893 ORTHO05D016035 1.1e-48 198.7 104 96.2
BcaC02g11825 Brassica carinata HOM05D017424 ORTHO05D094481 5.5e-48 196.4 184 57.6
BolC7t44367H Brassica oleracea HOM05D010893 ORTHO05D042297 9.4e-48 195.7 105 95.2
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 1.6e-47 194.9 340 42.6
BolC4t28028H Brassica oleracea HOM05D000722 ORTHO05D000025 1.6e-47 194.9 220 53.6
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 3.6e-47 193.7 495 36.2
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 4.0e-46 190.3 493 36.1
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 7.5e-45 186.0 259 48.6
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 3.7e-44 183.7 192 57.3
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 1.1e-43 182.2 264 47.7
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 1.1e-43 182.2 228 51.3
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 4.1e-43 180.3 495 34.3
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 1.2e-42 178.7 191 56.5
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 3.8e-41 173.7 192 55.7
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 8.0e-39 166.0 157 64.3
C02p63430 Brassica napus HOM05D014255 ORTHO05D015450 1.8e-35 154.8 258 43.4
BolC2t12410H Brassica oleracea HOM05D014255 ORTHO05D015450 1.8e-35 154.8 258 43.4
C03p32540 Brassica napus HOM05D014255 ORTHO05D015450 3.1e-35 154.1 301 39.9
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 4.7e-31 140.2 133 63.2
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 8.0e-31 139.4 177 49.2
C08p35010 Brassica napus HOM05D009754 ORTHO05D033217 1.1e-27 129.0 227 43.6
BraA02t06231Z Brassica rapa HOM05D011556 ORTHO05D014123 1.4e-27 128.6 173 46.8
BraA06t23408Z Brassica rapa HOM05D001897 ORTHO05D001953 7.0e-27 126.3 118 60.2
BcaB07g31310 Brassica carinata HOM05D029219 ORTHO05D091766 9.2e-27 125.9 239 41.4
C07p18370 Brassica napus HOM05D009754 ORTHO05D033217 1.1e-24 119.0 232 40.5
C05p02990 Brassica napus HOM05D009754 ORTHO05D101014 4.3e-24 117.1 159 48.4
BolC4t25298H Brassica oleracea HOM05D009754 ORTHO05D020043 8.9e-22 109.4 411 30.7
BcaB04g21169 Brassica carinata HOM05D014255 ORTHO05D015450 1.3e-20 105.5 234 35.9
C07p15790 Brassica napus HOM05D011556 ORTHO05D014123 6.4e-20 103.2 152 44.1
C03p25990 Brassica napus HOM05D010948 ORTHO05D013805 1.4e-19 102.1 170 40.6
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 7.0e-19 99.8 122 50.8
A09p03830 Brassica napus HOM05D011556 ORTHO05D014123 3.5e-18 97.4 152 42.8
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 1.0e-17 95.9 109 52.3
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 1.0e-17 95.9 202 37.1
BolC2t06272H Brassica oleracea HOM05D011556 ORTHO05D014123 1.3e-17 95.5 152 41.4
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 5.0e-17 93.6 112 51.8
C08p42710 Brassica napus HOM05D011556 ORTHO05D014123 6.6e-17 93.2 146 42.5
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 8.6e-17 92.8 202 37.1
C02p10230 Brassica napus HOM05D011556 ORTHO05D014123 1.1e-16 92.4 152 41.4
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 1.1e-16 92.4 202 37.1
C04p32520 Brassica napus HOM05D011556 ORTHO05D014123 1.5e-16 92.0 73 65.8
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 1.9e-16 91.7 201 39.3
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 1.2e-15 89.0 109 49.5
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 1.2e-15 89.0 174 40.8
C08p49870 Brassica napus HOM05D011556 ORTHO05D041066 1.6e-15 88.6 118 45.8
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 2.1e-15 88.2 131 48.1
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 2.1e-15 88.2 128 49.2
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 2.8e-15 87.8 407 28.7
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 2.8e-15 87.8 96 49.0
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 2.8e-15 87.8 222 36.0
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 3.6e-15 87.4 196 35.7
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 3.6e-15 87.4 209 35.4
BcaC01g00510 Brassica carinata HOM05D010948 ORTHO05D039443 4.7e-15 87.0 115 47.0
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 4.7e-15 87.0 96 52.1
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 4.7e-15 87.0 96 52.1
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 6.2e-15 86.7 91 51.6
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 6.2e-15 86.7 184 39.1
BolC5t31661H Brassica oleracea HOM05D010893 ORTHO05D032720 8.1e-15 86.3 63 74.6
BolC8t52515H Brassica oleracea HOM05D011556 ORTHO05D041066 8.1e-15 86.3 118 45.8
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 1.1e-14 85.9 179 39.7
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 1.1e-14 85.9 196 35.7
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 1.4e-14 85.5 100 50.0
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 1.4e-14 85.5 85 57.6
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 1.4e-14 85.5 100 50.0
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 1.8e-14 85.1 96 52.1
A03p59560 Brassica napus HOM05D010948 ORTHO05D013805 1.8e-14 85.1 140 45.0
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 2.3e-14 84.7 108 42.6
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 2.3e-14 84.7 174 40.2
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 3.1e-14 84.3 135 46.7
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 4.0e-14 84.0 255 34.5
C03p80810 Brassica napus HOM05D010948 ORTHO05D039443 5.2e-14 83.6 80 58.8
C06p45540 Brassica napus HOM05D017424 ORTHO05D032352 5.2e-14 83.6 56 75.0
BolC5t29061H Brassica oleracea HOM05D010893 ORTHO05D032720 5.2e-14 83.6 64 73.4
A07p28660 Brassica napus HOM05D010948 ORTHO05D013805 8.9e-14 82.8 140 44.3
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 1.2e-13 82.4 193 37.3
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 1.2e-13 82.4 106 47.2
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 1.5e-13 82.0 402 29.4
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 1.5e-13 82.0 113 45.1
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 2.0e-13 81.6 99 50.5
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 2.0e-13 81.6 106 45.3
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 2.6e-13 81.3 174 38.5
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 2.6e-13 81.3 186 43.0
BcaB01g05924 Brassica carinata HOM05D010948 ORTHO05D013805 3.4e-13 80.9 171 37.4
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 3.4e-13 80.9 91 52.7
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 4.4e-13 80.5 96 50.0
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 4.4e-13 80.5 96 50.0
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 5.8e-13 80.1 106 47.2
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 7.5e-13 79.7 96 44.8
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 7.5e-13 79.7 91 49.5
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 1.3e-12 79.0 106 46.2
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 1.3e-12 79.0 99 51.5
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 1.7e-12 78.6 91 49.5
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 1.7e-12 78.6 383 29.8
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 2.2e-12 78.2 136 41.9
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 2.2e-12 78.2 97 49.5
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 2.9e-12 77.8 97 49.5
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 4.9e-12 77.0 163 39.9
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 4.9e-12 77.0 136 41.2
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 4.9e-12 77.0 381 29.7
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 4.9e-12 77.0 136 41.2
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 4.9e-12 77.0 381 28.9
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 6.4e-12 76.6 106 44.3
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 6.4e-12 76.6 395 28.4
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 6.4e-12 76.6 148 38.5
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 8.3e-12 76.3 136 41.2
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 1.1e-11 75.9 136 41.2
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 1.1e-11 75.9 95 51.6
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 1.1e-11 75.9 95 51.6
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 1.1e-11 75.9 95 51.6
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 1.1e-11 75.9 362 30.9
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 1.1e-11 75.9 95 51.6
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 1.4e-11 75.5 185 37.8
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 1.4e-11 75.5 106 42.5
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 2.4e-11 74.7 96 44.8
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 3.2e-11 74.3 93 49.5
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 4.1e-11 73.9 93 47.3
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 4.1e-11 73.9 93 49.5
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 5.4e-11 73.6 179 36.3
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 7.1e-11 73.2 95 50.5
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 9.2e-11 72.8 179 35.8
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 9.2e-11 72.8 188 37.2
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 9.2e-11 72.8 98 49.0
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 9.2e-11 72.8 179 35.8
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 1.2e-10 72.4 97 47.4
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 1.2e-10 72.4 97 47.4
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 1.6e-10 72.0 179 35.8
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 1.6e-10 72.0 98 49.0
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 2.1e-10 71.6 95 50.5
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 2.1e-10 71.6 179 35.8
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 2.1e-10 71.6 92 48.9
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 2.7e-10 71.2 155 38.7
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 2.7e-10 71.2 344 29.9
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 3.5e-10 70.9 118 43.2
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 3.5e-10 70.9 131 42.0
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 3.5e-10 70.9 92 51.1
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 3.5e-10 70.9 202 38.1
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 3.5e-10 70.9 155 38.1
BcaC02g08745 Brassica carinata HOM05D010893 ORTHO05D032720 1.3e-09 68.9 51 70.6
A01p00100 Brassica napus HOM05D010948 ORTHO05D013805 1.3e-09 68.9 113 43.4
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 3.9e-09 67.4 112 44.6
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 3.9e-09 67.4 99 46.5
BolC3t12674H Brassica oleracea HOM05D010928 ORTHO05D016821 3.9e-09 67.4 391 28.4
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 3.9e-09 67.4 95 48.4
BolC9t55422H Brassica oleracea HOM05D010948 ORTHO05D013805 3.9e-09 67.4 139 38.1
C02p36550 Brassica napus HOM05D014255 ORTHO05D039464 5.1e-09 67.0 88 44.3
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 5.1e-09 67.0 95 48.4
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 6.6e-09 66.6 164 37.2
C03p51770 Brassica napus HOM05D010948 ORTHO05D013805 6.6e-09 66.6 86 50.0
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 8.6e-09 66.2 83 49.4
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 8.6e-09 66.2 83 51.8
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 8.6e-09 66.2 83 49.4
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 1.5e-08 65.5 95 46.3
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 1.9e-08 65.1 95 49.5
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 2.5e-08 64.7 365 29.9
BolC2t08519H Brassica oleracea HOM05D009754 ORTHO05D105200 4.3e-08 63.9 66 56.1
BcaC01g01758 Brassica carinata HOM05D003240 ORTHO05D032152 5.6e-08 63.5 66 54.5
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 5.6e-08 63.5 62 62.9
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 5.6e-08 63.5 62 62.9
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 9.5e-08 62.8 79 53.2
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 1.2e-07 62.4 100 49.0
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 1.2e-07 62.4 100 49.0
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 1.6e-07 62.0 83 47.0
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 2.1e-07 61.6 164 36.0
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 2.1e-07 61.6 83 47.0
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 2.8e-07 61.2 83 51.8
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 2.8e-07 61.2 83 47.0
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 2.8e-07 61.2 179 32.4
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 2.8e-07 61.2 83 47.0
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 2.8e-07 61.2 83 47.0
A06p33010 Brassica napus HOM05D003240 ORTHO05D098331 4.7e-07 60.5 87 47.1
BcaC03g17878 Brassica carinata HOM05D010928 ORTHO05D016821 8.1e-07 59.7 141 39.7
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 1.4e-06 58.9 99 42.4
BolC5t28988H Brassica oleracea HOM05D010928 ORTHO05D016821 1.4e-06 58.9 183 36.6
BcaC04g20835 Brassica carinata HOM05D010948 ORTHO05D013805 1.8e-06 58.5 76 48.7
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 1.8e-06 58.5 206 33.5
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 1.8e-06 58.5 177 38.4
C09p38650 Brassica napus HOM05D010948 ORTHO05D013805 1.8e-06 58.5 76 48.7
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 1.8e-06 58.5 177 38.4
BolC9t56721H Brassica oleracea HOM05D010948 ORTHO05D013805 1.8e-06 58.5 76 48.7
C04p67930 Brassica napus HOM05D008956 ORTHO05D098482 3.1e-06 57.8 63 54.0
C05p58750 Brassica napus HOM05D003240 ORTHO05D019881 3.1e-06 57.8 126 37.3
C02p59180 Brassica napus HOM05D010928 ORTHO05D103551 4.0e-06 57.4 74 51.4
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 8.9e-06 56.2 83 43.4
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 8.9e-06 56.2 118 40.7
C07p10670 Brassica napus HOM05D009935 ORTHO05D012055 8.9e-06 56.2 51 58.8


User provided reference genes

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