Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p07050 Brassica napus HOM05D015565 ORTHO05D017608 1.5e-71 272.7 132 100.0
BolC8t47548H Brassica oleracea HOM05D015565 ORTHO05D017608 1.5e-71 272.7 132 100.0
A03p65280 Brassica napus HOM05D015565 ORTHO05D017608 1.7e-64 249.2 127 95.3
BraA03t15583Z Brassica rapa HOM05D015565 ORTHO05D017608 1.7e-64 249.2 127 95.3
A09p60390 Brassica napus HOM05D015565 ORTHO05D017608 2.1e-62 242.3 127 92.9
A01p11980 Brassica napus HOM05D015565 ORTHO05D017608 4.8e-62 241.1 127 92.9
BraA01t01140Z Brassica rapa HOM05D015565 ORTHO05D017608 4.8e-62 241.1 127 92.9
BolC7t44632H Brassica oleracea HOM05D015565 ORTHO05D017608 6.7e-56 220.7 114 96.5
BcaC07g37277 Brassica carinata HOM05D015565 ORTHO05D017608 1.0e-32 143.7 81 91.4
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-24 115.2 115 54.8
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-21 107.1 115 52.2
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 2.4e-21 105.9 114 50.0
A04p09780 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-20 102.1 97 56.7
BraA04t16639Z Brassica rapa HOM05D000313 ORTHO05D000065 3.4e-20 102.1 97 56.7
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-19 100.5 133 45.9
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 1.0e-19 100.5 133 45.9
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-19 98.2 114 47.4
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 5.0e-19 98.2 114 47.4
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-18 95.1 115 46.1
BolC3t17675H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-18 95.1 102 53.9
BraA03t15605Z Brassica rapa HOM05D000313 ORTHO05D000065 4.2e-18 95.1 115 46.1
BraA03t14449Z Brassica rapa HOM05D000313 ORTHO05D000065 5.5e-18 94.7 115 46.1
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 9.4e-18 94.0 115 45.2
BcaC09g48413 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-17 93.6 115 43.5
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-17 92.0 133 45.9
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-17 92.0 106 46.2
BraA07t29991Z Brassica rapa HOM05D000313 ORTHO05D000065 8.0e-17 90.9 128 40.6
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-16 90.5 111 45.0
C07p40640 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-16 90.5 111 45.0
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-16 90.1 115 47.0
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-16 89.7 140 42.9
C03p49010 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-16 89.0 122 45.9
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-16 87.8 115 41.7
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 8.8e-16 87.4 109 44.0
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-15 85.9 112 42.9
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 3.3e-15 85.5 133 41.4
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 3.3e-15 85.5 133 41.4
A06p31410 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-15 85.1 133 39.1
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-15 85.1 133 39.1
C08p36910 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-15 84.7 112 44.6
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 7.4e-15 84.3 112 42.0
C07p18950 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-14 82.4 117 44.4
BolC2t09877H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-14 82.0 133 42.1
A02p25350 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-14 80.9 80 60.0
BraA02t07522Z Brassica rapa HOM05D000313 ORTHO05D000065 1.4e-13 80.1 88 54.5
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-13 79.0 115 42.6
BcaC07g37052 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-13 79.0 116 42.2
BcaNung02693 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-13 79.0 101 45.5
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-13 78.2 133 38.3
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 9.1e-13 77.4 93 44.1
BcaC01g03291 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-12 77.0 55 70.9
BraA07t31324Z Brassica rapa HOM05D000313 ORTHO05D000065 1.6e-12 76.6 101 43.6
C02p38600 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-12 75.9 120 40.0
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-12 74.7 98 43.9
A07p04670 Brassica napus HOM05D000313 ORTHO05D042285 2.2e-11 72.8 82 50.0
BraA07t28253Z Brassica rapa HOM05D000313 ORTHO05D042285 2.2e-11 72.8 82 50.0
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-11 72.4 115 36.5
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-11 71.6 91 44.0
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-11 71.6 91 44.0
C01p35780 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-11 71.6 115 41.7
BolC1t03539H Brassica oleracea HOM05D000313 ORTHO05D000065 5.0e-11 71.6 115 41.7
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-10 70.1 117 37.6
C07p50150 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-10 69.3 92 43.5
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-10 68.9 114 36.8
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 3.2e-10 68.9 114 36.8
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-10 67.8 117 36.8
BolC7t43564H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-10 67.8 115 38.3
BcaC05g28021 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-10 67.4 65 53.8
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 9.4e-10 67.4 121 36.4
A05p29610 Brassica napus HOM05D000313 ORTHO05D000065 9.4e-10 67.4 117 35.9
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 9.4e-10 67.4 116 35.3
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 9.4e-10 67.4 114 36.8
C04p56080 Brassica napus HOM05D014693 ORTHO05D039701 9.4e-10 67.4 80 50.0
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 9.4e-10 67.4 116 37.9
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-09 67.0 108 36.1
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 66.6 117 39.3
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 66.6 109 39.4
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 66.6 109 39.4
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 66.6 117 36.8
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 66.6 117 35.9
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 66.6 109 42.2
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-09 66.2 98 39.8
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-09 66.2 109 39.4
A05p29370 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-09 66.2 117 35.0
A07p14660 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-09 66.2 109 36.7
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-09 66.2 109 39.4
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-09 65.9 109 34.9
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 65.9 117 35.0
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 65.9 109 34.9
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-09 65.5 109 39.4
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 6.1e-09 64.7 115 35.7
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-09 64.3 113 35.4
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-09 64.3 107 38.3
C07p41060 Brassica napus HOM05D026226 ORTHO05D027671 8.0e-09 64.3 33 100.0
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-08 63.9 86 41.9
BcaB06g27595 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-08 63.5 107 33.6
BcaC09g51352 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-08 63.5 99 36.4
A01p40600 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-08 63.5 114 37.7
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-08 63.5 96 39.6
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-08 63.5 108 36.1
BraA01t02560Z Brassica rapa HOM05D000313 ORTHO05D000065 1.4e-08 63.5 114 37.7
BcaC02g09918 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-08 63.2 99 36.4
C04p35220 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-08 63.2 99 36.4
BolC2t07261H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-08 63.2 55 60.0
BolC4t25076H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-08 63.2 99 36.4
BcaC01g00020 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-08 62.4 95 41.1
C04p26780 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-08 62.4 98 37.8
BolC4t24124H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-08 62.4 98 37.8
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-08 61.6 115 39.1
BolC9t57465H Brassica oleracea HOM05D000313 ORTHO05D039480 5.2e-08 61.6 55 67.3
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-08 61.2 102 37.3
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 8.8e-08 60.8 104 37.5
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 60.5 116 35.3
BcaC04g22281 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 59.7 84 44.0
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-07 59.3 107 34.6
BolC2t12255H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-07 59.3 55 58.2
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-07 58.9 92 37.0
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-07 58.9 142 30.3
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-07 58.5 107 31.8
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 5.7e-07 58.2 92 35.9
BcaC05g28024 Brassica carinata HOM05D000313 ORTHO05D000065 7.5e-07 57.8 76 47.4
C05p40380 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-07 57.8 76 47.4
C08p42070 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-07 57.8 88 37.5
BolC5t32686H Brassica oleracea HOM05D000313 ORTHO05D000065 7.5e-07 57.8 95 37.9
BolC5t32778H Brassica oleracea HOM05D000313 ORTHO05D000065 7.5e-07 57.8 76 47.4
BolC3t20344H Brassica oleracea HOM05D000313 ORTHO05D000065 9.7e-07 57.4 81 42.0
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 9.7e-07 57.4 90 36.7
BraA03t09628Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-06 57.0 85 42.4
C09p46520 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 56.6 61 54.1
BolC8t47221H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-06 56.6 65 49.2
BolC9t57505H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-06 56.6 61 54.1
C01p19510 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 56.2 83 38.6
BraA08t34048Z Brassica rapa HOM05D000313 ORTHO05D000065 2.2e-06 56.2 104 37.5
BcaB01g03278 Brassica carinata HOM05D017000 ORTHO05D000065 2.8e-06 55.8 39 74.4
BcaC08g43805 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-06 55.8 103 32.0
BcaB01g02596 Brassica carinata HOM05D002389 ORTHO05D000065 3.7e-06 55.5 74 48.6
BcaC02g09566 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 55.5 104 32.7
C06p11820 Brassica napus HOM05D000313 ORTHO05D024047 3.7e-06 55.5 103 32.0
A08p22820 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-06 55.1 65 49.2
BolC3t16695H Brassica oleracea HOM05D000313 ORTHO05D000065 4.8e-06 55.1 91 39.6
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-06 54.7 92 38.0
C06p35960 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-06 54.7 50 56.0
C09p38910 Brassica napus HOM05D000313 ORTHO05D032045 8.2e-06 54.3 55 56.4
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-06 54.3 32 68.8
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 8.2e-06 54.3 113 31.9
BolC9t56761H Brassica oleracea HOM05D000313 ORTHO05D032045 8.2e-06 54.3 55 56.4
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 8.2e-06 54.3 32 68.8


User provided reference genes

Program Settings