Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 3.8e-170 601.7 359 100.0
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 5.6e-166 587.8 359 96.9
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 9.9e-163 577.0 359 95.0
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 9.9e-163 577.0 359 95.0
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 6.2e-157 557.8 339 99.1
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 2.9e-154 548.9 359 90.0
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 3.5e-131 472.2 373 80.2
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 5.3e-124 448.4 364 77.7
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 9.1e-124 447.6 371 76.3
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 4.2e-121 438.7 359 75.5
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 1.6e-120 436.8 360 77.8
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 7.5e-110 401.4 372 71.8
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.7e-101 373.6 373 67.0
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 4.9e-69 265.8 387 52.5
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 1.5e-49 201.1 383 41.3
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 9.6e-49 198.4 385 41.6
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 6.9e-47 192.2 378 38.4
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 2.0e-46 190.7 388 38.7
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 5.8e-46 189.1 386 43.0
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 2.9e-45 186.8 383 38.1
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.4e-44 184.5 386 40.2
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 2.5e-44 183.7 384 39.3
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 4.6e-43 179.5 362 42.5
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 1.3e-42 177.9 343 37.0
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 2.3e-42 177.2 387 39.8
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 4.3e-41 172.9 380 35.0
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 4.3e-41 172.9 380 40.5
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 1.3e-40 171.4 371 39.4
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.6e-40 171.0 383 36.3
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.1e-40 170.6 367 42.5
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.1e-39 168.3 376 42.0
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.4e-39 167.9 370 34.9
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.8e-39 167.5 379 38.8
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 4.0e-39 166.4 358 42.7
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 3.4e-38 163.3 413 39.2
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 7.6e-38 162.2 387 38.8
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 3.8e-37 159.8 380 41.8
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 6.5e-37 159.1 381 38.1
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.1e-36 158.3 381 37.0
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 2.5e-36 157.1 334 33.5
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 3.2e-36 156.8 293 39.6
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 3.2e-36 156.8 364 35.7
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 7.1e-36 155.6 374 38.2
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 1.6e-35 154.5 382 34.0
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 1.6e-35 154.5 380 38.4
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 2.1e-35 154.1 363 38.8
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.7e-35 153.7 382 33.5
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.3e-34 151.4 362 32.9
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.3e-34 151.4 379 38.0
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 2.3e-34 150.6 364 40.1
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 6.7e-34 149.1 341 36.1
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 6.7e-34 149.1 379 34.6
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.1e-33 148.3 382 34.8
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 1.1e-33 148.3 373 41.3
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 7.4e-33 145.6 399 33.3
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.3e-32 144.8 370 37.6
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.6e-32 144.4 373 34.0
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 2.8e-32 143.7 370 33.5
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 2.8e-32 143.7 414 30.2
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 3.7e-32 143.3 267 38.6
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 3.7e-32 143.3 420 30.7
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 4.8e-32 142.9 403 30.0
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 1.1e-31 141.7 381 35.4
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 1.4e-31 141.4 317 40.4
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 1.8e-31 141.0 382 36.1
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 3.1e-31 140.2 375 38.4
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.5e-30 137.9 358 35.8
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 3.4e-30 136.7 357 38.7
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 5.9e-30 136.0 262 37.4
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 1.7e-29 134.4 366 31.4
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 5.0e-29 132.9 396 31.3
BolC3t19970H Brassica oleracea HOM05D005773 ORTHO05D006930 6.5e-29 132.5 192 50.5
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 1.4e-28 131.3 411 33.6
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 7.2e-28 129.0 381 37.3
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 9.4e-28 128.6 414 33.3
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 1.6e-27 127.9 367 37.6
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 2.1e-27 127.5 364 37.9
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 2.7e-27 127.1 414 33.3
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 3.6e-27 126.7 369 33.9
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.6e-27 126.7 387 38.0
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 4.6e-27 126.3 293 35.2
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 4.6e-27 126.3 422 34.1
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 6.1e-27 125.9 266 44.7
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 7.9e-27 125.6 385 31.9
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 1.8e-26 124.4 426 30.5
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.5e-25 121.3 382 34.6
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.5e-25 121.3 366 36.3
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 2.5e-25 120.6 370 38.1
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.3e-25 119.8 385 29.1
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 1.3e-24 118.2 362 36.7
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 1.7e-24 117.9 376 36.4
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 2.8e-24 117.1 312 36.2
BcaC01g00240 Brassica carinata HOM05D005773 ORTHO05D006930 1.1e-23 115.2 265 35.8
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.4e-23 114.8 364 34.9
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 3.1e-23 113.6 364 37.4
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 6.9e-23 112.5 375 34.9
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 9.1e-23 112.1 366 35.5
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 2.0e-22 110.9 247 33.2
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 7.7e-22 109.0 359 35.9
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 7.7e-22 109.0 328 35.4
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 8.5e-21 105.5 252 44.0
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.1e-20 105.1 231 33.3
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 1.8e-18 97.8 93 49.5
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.0e-18 97.1 176 35.8
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 3.0e-18 97.1 372 35.2
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 6.7e-18 95.9 89 48.3
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 1.5e-17 94.7 367 36.0
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 2.0e-17 94.4 216 32.4
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 2.0e-17 94.4 358 27.9
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 2.0e-17 94.4 381 30.4
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.6e-17 94.0 52 80.8
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 9.7e-17 92.0 375 33.6
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 2.8e-16 90.5 87 51.7
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 3.1e-15 87.0 103 46.6
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 3.1e-15 87.0 369 30.6
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 3.5e-14 83.6 331 35.0
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.0e-13 82.0 162 38.3
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.7e-13 81.3 338 34.9
BcaB08g34443 Brassica carinata HOM05D005773 ORTHO05D006930 2.2e-13 80.9 56 78.6
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 5.0e-13 79.7 338 34.3
BcaB05g23126 Brassica carinata HOM05D005773 ORTHO05D006930 2.5e-12 77.4 99 52.5
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 3.2e-12 77.0 406 27.6
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 3.9e-10 70.1 56 60.7
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 1.1e-07 62.0 45 64.4
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.4e-07 60.8 58 60.3
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 5.3e-07 59.7 93 44.1
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 7.0e-07 59.3 88 36.4
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 7.0e-07 59.3 90 43.3
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 9.1e-07 58.9 55 60.0
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 3.5e-06 57.0 73 39.7
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 3.5e-06 57.0 82 39.0


User provided reference genes

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