Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 2.9e-249 864.8 442 100.0
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 2.5e-248 861.7 442 99.8
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 1.2e-247 859.4 442 99.5
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 4.7e-247 857.4 442 99.3
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 1.0e-246 856.3 442 99.1
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 2.0e-245 852.0 442 98.9
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 1.7e-244 849.0 443 98.4
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 1.7e-244 849.0 443 98.4
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 2.2e-244 848.6 444 98.4
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 3.7e-244 847.8 443 98.2
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 2.4e-243 845.1 442 98.2
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 2.4e-243 845.1 442 98.2
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 5.0e-241 837.4 442 97.1
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 2.6e-237 825.1 442 96.2
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 4.4e-237 824.3 442 95.2
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 9.8e-237 823.2 442 95.7
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 4.1e-235 817.8 441 95.2
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 7.8e-234 813.5 441 94.8
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 9.2e-219 763.5 445 87.9
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 1.2e-215 753.1 448 85.5
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 9.0e-206 720.3 428 84.8
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 9.0e-206 720.3 429 83.9
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 1.3e-204 716.5 429 83.0
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 6.4e-204 714.1 431 82.8
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 6.4e-204 714.1 431 82.8
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.9e-203 712.6 424 84.2
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.9e-203 712.6 423 84.2
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.2e-202 709.9 424 84.0
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 6.0e-202 707.6 433 83.1
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.3e-201 706.4 423 83.7
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 3.0e-201 705.3 427 83.6
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 3.9e-201 704.9 429 83.9
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.5e-200 702.2 429 81.8
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 5.6e-200 701.0 424 83.7
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 9.6e-200 700.3 429 81.6
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 9.6e-200 700.3 429 81.6
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 3.1e-198 695.3 455 78.9
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 4.0e-198 694.9 429 82.5
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 5.8e-197 691.0 424 81.4
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 4.9e-196 688.0 425 80.9
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 6.4e-196 687.6 424 80.7
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 8.4e-196 687.2 433 80.6
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 9.3e-195 683.7 425 81.2
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 9.3e-195 683.7 477 74.6
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.6e-194 682.9 425 80.2
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.6e-194 682.9 428 79.9
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 2.1e-194 682.6 429 80.0
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 2.7e-194 682.2 430 80.7
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 2.7e-194 682.2 432 79.2
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 3.5e-194 681.8 435 79.8
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 3.5e-194 681.8 435 79.8
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 3.5e-194 681.8 429 80.2
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 3.5e-194 681.8 433 78.8
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.0e-193 680.2 429 80.0
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 3.0e-193 678.7 431 80.3
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 3.0e-193 678.7 438 79.0
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 6.7e-193 677.6 425 81.4
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 8.7e-193 677.2 425 79.8
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 8.7e-193 677.2 425 79.5
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 1.5e-192 676.4 438 77.9
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.5e-192 676.4 425 79.5
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 3.3e-192 675.2 422 79.9
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 4.3e-192 674.9 429 79.5
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 5.6e-192 674.5 443 77.7
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 5.6e-192 674.5 426 80.8
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 1.3e-191 673.3 438 77.6
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.6e-191 672.9 438 78.5
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 2.1e-191 672.5 432 79.2
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 2.8e-191 672.2 427 80.6
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 2.8e-191 672.2 427 79.9
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 2.8e-191 672.2 435 79.8
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 3.7e-191 671.8 425 80.0
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 3.7e-191 671.8 432 78.5
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 4.8e-191 671.4 418 81.1
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 4.8e-191 671.4 436 78.9
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 8.1e-191 670.6 428 78.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 8.1e-191 670.6 431 78.9
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 1.4e-190 669.8 427 79.4
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 2.4e-190 669.1 429 79.7
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 2.4e-190 669.1 428 78.3
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 3.1e-190 668.7 424 79.0
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 4.0e-190 668.3 378 86.8
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 4.0e-190 668.3 423 80.6
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 5.3e-190 667.9 428 78.0
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 1.5e-189 666.4 424 78.8
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 3.4e-189 665.2 425 78.4
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 4.5e-189 664.8 436 77.8
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 5.8e-189 664.5 434 77.9
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 9.9e-189 663.7 427 78.5
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 1.3e-188 663.3 439 75.6
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 2.2e-188 662.5 430 78.6
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 4.9e-188 661.4 426 80.0
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 6.4e-188 661.0 428 78.5
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 8.4e-188 660.6 464 73.7
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 8.4e-188 660.6 428 79.0
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 1.4e-187 659.8 432 76.6
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 1.4e-187 659.8 429 77.9
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 3.2e-187 658.7 425 76.9
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 3.2e-187 658.7 429 78.1
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 4.2e-187 658.3 429 78.3
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 5.5e-187 657.9 428 77.6
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.6e-186 656.4 455 74.3
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.6e-186 656.4 429 78.1
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 2.7e-186 655.6 425 79.1
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 3.5e-186 655.2 425 78.8
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 3.9e-185 651.7 445 75.7
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 6.7e-185 651.0 426 77.0
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.4e-184 647.5 425 77.4
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 9.6e-184 647.1 431 78.0
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 1.6e-183 646.4 427 78.2
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 2.1e-183 646.0 425 77.2
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 2.8e-183 645.6 433 76.7
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 4.8e-183 644.8 432 76.4
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 8.2e-183 644.0 436 76.4
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 8.2e-183 644.0 428 76.9
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 2.7e-178 629.0 406 77.3
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 7.9e-178 627.5 428 75.2
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 3.3e-176 622.1 507 65.5
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 4.3e-176 621.7 428 75.9
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 7.4e-176 620.9 547 61.8
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 9.7e-176 620.5 395 77.7
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 3.7e-175 618.6 426 74.6
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 4.5e-173 611.7 414 74.2
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 7.7e-173 610.9 431 73.1
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 5.0e-172 608.2 426 74.4
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 5.5e-171 604.7 430 73.0
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 6.1e-170 601.3 403 72.7
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.0e-169 600.5 417 72.7
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 2.3e-169 599.4 388 74.2
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 1.7e-167 593.2 424 73.3
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 1.7e-167 593.2 419 72.6
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 1.1e-166 590.5 342 83.6
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 1.2e-165 587.0 384 74.2
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 1.7e-159 566.6 362 79.6
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 5.3e-158 561.6 337 83.4
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 9.1e-158 560.8 362 77.9
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 1.2e-157 560.5 343 83.1
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 1.9e-155 553.1 342 80.7
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 1.1e-150 537.3 345 74.5
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 5.0e-148 528.5 336 80.1
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 1.5e-144 516.9 436 64.9
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 2.6e-144 516.2 408 65.4
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 2.2e-143 513.1 322 77.0
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 5.3e-142 508.4 383 69.7
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 3.5e-141 505.8 432 63.4
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 3.5e-141 505.8 377 67.6
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 8.5e-140 501.1 345 74.2
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 6.8e-129 464.9 261 85.4
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 7.0e-118 428.3 262 82.1
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 7.0e-118 428.3 331 63.4
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 4.6e-117 425.6 283 75.3
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 2.6e-112 409.8 430 54.7
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 3.0e-100 369.8 230 81.3
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 9.6e-99 364.8 239 76.6
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 2.7e-85 320.1 191 84.3
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 1.9e-83 313.9 231 71.4
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.8e-82 309.3 186 83.3
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 2.4e-78 297.0 365 44.9
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 9.3e-78 295.0 355 49.3
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.5e-67 261.2 157 79.0
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 7.1e-62 242.3 220 63.6
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 4.6e-61 239.6 146 80.1
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 8.7e-60 235.3 186 61.8
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 8.7e-60 235.3 186 61.8
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.3e-58 231.5 244 56.6
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 8.2e-42 175.6 140 67.1
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 1.4e-41 174.9 99 87.9
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 4.5e-32 143.3 220 45.9
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.6e-29 133.7 294 35.7
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 3.0e-28 130.6 82 79.3
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 3.2e-22 110.5 82 69.5
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 4.2e-22 110.2 60 88.3
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.4e-19 100.5 90 58.9
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 3.4e-19 100.5 59 84.7
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 3.4e-19 100.5 59 84.7
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 6.6e-15 86.3 81 60.5
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 1.9e-14 84.7 81 61.7
AL1G55650 Arabidopsis lyrata HOM05D003566 ORTHO05D005288 2.5e-14 84.3 53 90.6
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 2.5e-14 84.3 112 46.4
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 5.6e-14 83.2 49 79.6
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 1.6e-13 81.6 81 60.5
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 1.6e-13 81.6 45 82.2
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 1.4e-12 78.6 55 74.5
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 3.5e-08 63.9 43 72.1
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 1.7e-07 61.6 37 81.1
AT1G48860 Arabidopsis thaliana HOM05D003566 ORTHO05D005288 3.9e-07 60.5 47 76.6


User provided reference genes

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