Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 4.3e-295 1017.3 533 100.0
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 3.1e-293 1011.1 533 99.2
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 1.5e-292 1008.8 533 99.2
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 1.4e-282 975.7 536 96.5
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 4.3e-279 964.1 533 95.1
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 9.6e-279 963.0 535 95.1
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 9.3e-274 946.4 549 89.3
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 4.8e-270 934.1 549 88.7
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 2.3e-264 915.2 543 88.4
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 7.4e-263 910.2 540 87.0
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 3.4e-260 901.4 547 85.4
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 4.5e-244 847.8 546 78.9
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 6.1e-241 837.4 516 82.6
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 3.9e-232 808.1 419 94.3
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 3.3e-223 778.5 522 73.4
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 9.7e-223 776.9 535 72.3
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 9.7e-223 776.9 523 73.0
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 1.7e-222 776.2 521 73.1
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 1.1e-221 773.5 527 72.1
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.8e-221 772.7 520 72.7
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 3.1e-221 771.9 528 72.5
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 3.1e-221 771.9 526 72.4
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.2e-220 770.0 526 72.1
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 2.0e-220 769.2 524 72.9
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 2.0e-220 769.2 549 71.9
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.7e-219 766.1 505 74.9
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 1.7e-219 766.1 525 75.4
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 3.8e-219 765.0 506 74.3
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 2.5e-218 762.3 533 73.9
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 7.2e-218 760.8 539 71.1
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 7.2e-218 760.8 540 71.1
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 9.4e-218 760.4 515 72.8
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 4.7e-217 758.1 525 71.8
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 3.0e-216 755.4 508 73.2
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 6.7e-216 754.2 535 70.8
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 8.8e-216 753.8 526 71.1
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 9.7e-215 750.4 520 70.4
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 9.7e-215 750.4 506 73.5
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 1.3e-214 750.0 511 72.8
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.3e-214 750.0 445 80.0
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 2.2e-214 749.2 508 72.0
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 3.7e-214 748.4 508 70.7
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 4.8e-214 748.0 533 70.7
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 8.2e-214 747.3 442 81.4
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 1.4e-213 746.5 510 72.5
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 1.8e-213 746.1 513 71.9
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 3.1e-213 745.3 508 71.7
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 4.1e-213 745.0 510 72.5
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 1.2e-212 743.4 538 69.9
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 1.6e-212 743.0 513 73.1
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 5.9e-212 741.1 444 80.2
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 7.7e-212 740.7 510 72.0
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.7e-211 739.6 512 70.7
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 2.2e-211 739.2 511 72.6
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 2.9e-211 738.8 545 67.5
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 5.0e-211 738.0 533 71.3
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 5.0e-211 738.0 444 80.0
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 8.5e-211 737.3 443 78.6
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 4.2e-210 734.9 545 67.2
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 4.2e-210 734.9 511 70.1
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 5.5e-210 734.6 515 71.5
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 9.4e-210 733.8 512 70.9
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 3.6e-209 731.9 505 70.5
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 4.7e-209 731.5 513 70.8
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 6.1e-209 731.1 534 68.7
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 6.1e-209 731.1 438 78.3
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 6.1e-209 731.1 532 67.5
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 2.3e-208 729.2 516 69.2
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 5.2e-208 728.0 517 70.4
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 8.8e-208 727.2 537 68.5
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.5e-207 726.5 458 77.5
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 2.6e-207 725.7 610 62.5
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 7.5e-207 724.2 516 69.6
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 1.3e-206 723.4 502 70.5
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 1.7e-206 723.0 443 78.1
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 1.4e-205 719.9 481 73.4
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 3.1e-205 718.8 443 77.4
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.6e-204 716.5 541 66.9
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 2.7e-204 715.7 508 69.5
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 4.5e-204 714.9 492 73.6
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 2.5e-202 709.1 511 68.9
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 7.2e-202 707.6 485 71.5
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.6e-201 706.4 512 68.6
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.8e-201 705.7 458 76.0
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 3.6e-201 705.3 444 77.3
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 6.1e-201 704.5 440 76.6
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 6.1e-201 704.5 442 77.6
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 8.0e-201 704.1 530 67.5
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 1.0e-200 703.7 499 70.1
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 8.9e-200 700.7 512 68.8
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 2.6e-199 699.1 511 68.7
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 1.7e-198 696.4 444 74.8
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 4.9e-198 694.9 493 70.0
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 9.2e-197 690.6 493 69.2
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 1.2e-196 690.3 443 73.6
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 2.5e-194 682.6 535 65.0
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 2.2e-182 642.9 372 82.8
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 2.2e-182 642.9 441 70.3
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 6.0e-172 608.2 527 60.9
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 2.8e-169 599.4 412 69.7
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.7e-158 563.5 375 74.9
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 1.7e-155 553.5 438 61.6
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 9.6e-154 547.7 439 60.6
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 1.9e-149 533.5 402 68.2
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 2.7e-148 529.6 435 60.2
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 4.9e-142 508.8 323 76.8
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 4.0e-136 489.2 435 56.3
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 2.5e-117 426.8 437 50.3
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 3.7e-113 412.9 484 47.9
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 2.8e-105 386.7 477 45.7
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.4e-104 383.6 443 50.1
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 1.2e-103 381.3 504 45.8
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 1.5e-101 374.4 440 49.3
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.9e-101 374.0 513 46.2
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 2.5e-101 373.6 443 49.0
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 2.2e-97 360.5 255 70.2
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 3.5e-95 353.2 507 43.0
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 3.7e-89 333.2 508 43.3
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 1.5e-85 321.2 481 40.3
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 2.6e-82 310.5 176 83.0
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 4.1e-72 276.6 169 77.5
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 4.0e-43 180.3 201 55.2
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 1.2e-42 178.7 152 57.9
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.5e-37 161.8 131 61.8
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 5.6e-37 159.8 138 58.7
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.6e-28 131.7 76 80.3
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 1.6e-28 131.7 141 51.8
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 1.2e-26 125.6 105 60.0
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 2.5e-21 107.8 104 56.7
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.0e-18 98.2 58 79.3
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.7e-09 68.6 113 42.5
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 2.1e-07 61.6 129 38.8
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.0e-06 59.3 113 38.1
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 2.3e-06 58.2 38 68.4
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 3.0e-06 57.8 95 44.2


User provided reference genes

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