Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 2.4e-65 251.9 117 100.0
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 6.3e-58 227.3 117 91.5
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 3.1e-57 224.9 117 90.6
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 9.1e-57 223.4 117 88.9
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 1.6e-56 222.6 117 88.9
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 1.6e-56 222.6 117 88.9
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 1.6e-56 222.6 117 88.9
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 1.6e-56 222.6 117 88.9
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 1.6e-56 222.6 117 88.9
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 2.0e-56 222.2 117 87.2
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 2.0e-56 222.2 117 87.2
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 5.9e-56 220.7 117 86.3
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 1.7e-55 219.2 117 86.3
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 1.7e-55 219.2 117 86.3
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 2.2e-55 218.8 117 86.3
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 3.8e-55 218.0 116 87.9
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 3.2e-54 214.9 117 88.9
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 4.2e-54 214.5 114 87.7
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 5.5e-54 214.2 117 84.6
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 9.4e-54 213.4 114 84.2
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 9.4e-54 213.4 114 86.8
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 8.0e-53 210.3 114 83.3
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 2.2e-50 202.2 116 79.3
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 2.8e-50 201.8 113 81.4
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 4.8e-50 201.1 116 79.3
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 8.2e-50 200.3 113 80.5
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 8.2e-50 200.3 116 78.4
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 1.1e-49 199.9 118 79.7
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 2.4e-49 198.7 117 78.6
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 4.1e-49 198.0 116 77.6
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 4.1e-49 198.0 117 76.9
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 5.3e-49 197.6 117 72.6
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 5.3e-49 197.6 120 75.8
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 9.1e-49 196.8 116 77.6
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 1.2e-48 196.4 113 78.8
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 1.6e-48 196.1 116 77.6
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 1.6e-48 196.1 113 77.9
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 2.7e-48 195.3 116 76.7
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 2.7e-48 195.3 116 76.7
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 3.5e-48 194.9 113 77.9
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 4.5e-48 194.5 116 75.0
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 1.0e-47 193.4 114 80.7
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 1.7e-47 192.6 121 72.7
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 1.7e-47 192.6 113 78.8
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.2e-47 192.2 114 78.9
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.9e-47 191.8 113 78.8
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 3.8e-47 191.4 112 81.2
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 3.8e-47 191.4 113 78.8
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 3.8e-47 191.4 113 74.3
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.8e-47 191.4 114 76.3
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.8e-47 191.4 114 76.3
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.8e-47 191.4 113 77.0
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 3.8e-47 191.4 116 77.6
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 3.8e-47 191.4 116 78.4
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 5.0e-47 191.0 114 76.3
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 1.1e-46 189.9 113 76.1
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 1.5e-46 189.5 113 74.3
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.5e-46 189.5 114 75.4
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 1.5e-46 189.5 112 76.8
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.9e-46 189.1 113 76.1
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 1.9e-46 189.1 113 76.1
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 2.5e-46 188.7 114 76.3
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 3.2e-46 188.3 114 75.4
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.2e-46 188.3 113 74.3
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 3.2e-46 188.3 115 74.8
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 7.2e-46 187.2 113 72.6
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 9.4e-46 186.8 115 75.7
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 9.4e-46 186.8 113 73.5
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 1.2e-45 186.4 114 76.3
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.2e-45 186.4 113 73.5
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 1.6e-45 186.0 113 75.2
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 2.7e-45 185.3 115 75.7
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 2.7e-45 185.3 113 74.3
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 3.6e-45 184.9 113 74.3
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 4.7e-45 184.5 114 76.3
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 6.1e-45 184.1 115 74.8
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 8.0e-45 183.7 113 73.5
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 8.0e-45 183.7 119 73.1
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 1.0e-44 183.3 115 73.9
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.4e-44 183.0 115 75.7
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 1.8e-44 182.6 116 75.9
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 2.3e-44 182.2 115 75.7
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 3.0e-44 181.8 116 71.6
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 5.2e-44 181.0 116 70.7
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 5.2e-44 181.0 115 73.9
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 6.8e-44 180.6 115 73.0
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 6.8e-44 180.6 114 76.3
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 8.8e-44 180.3 114 71.9
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 8.8e-44 180.3 117 69.2
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.5e-43 179.5 115 72.2
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 2.0e-43 179.1 116 69.8
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.0e-43 179.1 115 72.2
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.0e-43 179.1 115 72.2
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 2.0e-43 179.1 117 69.2
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.6e-43 178.7 113 71.7
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 2.6e-43 178.7 113 71.7
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 2.6e-43 178.7 115 73.0
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 3.4e-43 178.3 113 71.7
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.7e-42 176.0 115 71.3
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 1.1e-41 173.3 89 85.4
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 1.8e-41 172.6 115 73.0
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 9.1e-41 170.2 92 80.4
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 2.0e-40 169.1 118 66.1
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.5e-40 168.3 87 86.2
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 3.5e-40 168.3 113 69.0
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 1.0e-39 166.8 112 68.8
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 3.8e-39 164.9 114 68.4
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 8.6e-39 163.7 104 72.1
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 6.1e-37 157.5 89 76.4
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 1.0e-36 156.8 109 67.0
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 1.4e-36 156.4 91 73.6
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 8.9e-36 153.7 111 64.0
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.0e-35 152.5 111 62.2
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 1.7e-34 149.4 89 74.2
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 7.3e-30 134.0 114 58.8
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 4.7e-29 131.3 84 73.8
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 6.1e-29 131.0 90 71.1
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 1.0e-28 130.2 85 72.9
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.0e-28 130.2 84 73.8
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 2.6e-27 125.6 84 72.6
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 2.6e-27 125.6 67 80.6
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 4.4e-27 124.8 85 65.9
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 7.0e-25 117.5 80 71.2
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.2e-24 116.7 87 65.5
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 8.9e-20 100.5 98 49.0
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.2e-19 100.1 83 63.9
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 7.8e-16 87.4 107 42.1
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 2.8e-13 79.0 55 67.3
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 4.4e-11 71.6 114 36.0
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 2.2e-10 69.3 57 54.4


User provided reference genes

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