Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p03590 Brassica napus HOM05D008062 ORTHO05D102483 4.7e-89 332.4 312 100.0
BolC9t53917H Brassica oleracea HOM05D008062 ORTHO05D011707 8.3e-78 295.0 312 82.7
C04p38920 Brassica napus HOM05D008062 ORTHO05D011707 1.1e-77 294.7 310 93.9
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 4.3e-74 282.7 315 83.8
C08p10040 Brassica napus HOM05D008062 ORTHO05D011707 4.4e-71 272.7 304 85.2
C04p66640 Brassica napus HOM05D008062 ORTHO05D011707 2.9e-70 270.0 312 81.1
C07p29390 Brassica napus HOM05D008062 ORTHO05D011707 9.0e-56 221.9 193 92.2
A04p05310 Brassica napus HOM05D008062 ORTHO05D097307 5.4e-53 212.6 336 64.9
BraA02t06440Z Brassica rapa HOM05D008062 ORTHO05D011707 1.2e-52 211.5 313 70.6
BolC3t18730H Brassica oleracea HOM05D008062 ORTHO05D011707 2.4e-48 197.2 183 65.0
C04p51550 Brassica napus HOM05D008062 ORTHO05D039816 7.6e-47 192.2 275 78.2
BcaC02g10054 Brassica carinata HOM05D008062 ORTHO05D011707 2.2e-46 190.7 313 61.7
BcaC02g08703 Brassica carinata HOM05D008062 ORTHO05D039816 4.9e-46 189.5 309 67.0
BraA07t28305Z Brassica rapa HOM05D008062 ORTHO05D011707 8.4e-46 188.7 261 76.2
BcaC01g04373 Brassica carinata HOM05D008062 ORTHO05D011707 2.1e-44 184.1 312 61.9
BcaC03g16266 Brassica carinata HOM05D008062 ORTHO05D011707 4.8e-41 172.9 299 62.9
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 8.1e-41 172.2 253 86.2
C04p16090 Brassica napus HOM05D008062 ORTHO05D011707 2.4e-40 170.6 190 70.0
C03p76590 Brassica napus HOM05D008062 ORTHO05D011707 4.9e-38 162.9 333 61.0
BraA01t00733Z Brassica rapa HOM05D008062 ORTHO05D011707 4.9e-38 162.9 310 46.5
BcaC09g49341 Brassica carinata HOM05D008062 ORTHO05D092147 1.1e-37 161.8 186 70.4
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 1.9e-37 161.0 312 67.3
A06p00920 Brassica napus HOM05D008062 ORTHO05D011707 7.1e-37 159.1 97 86.6
A09p64590 Brassica napus HOM05D008062 ORTHO05D011707 7.1e-37 159.1 97 86.6
C02p45980 Brassica napus HOM05D008062 ORTHO05D011707 7.1e-37 159.1 97 86.6
BcaC08g45521 Brassica carinata HOM05D008062 ORTHO05D032683 1.6e-36 157.9 314 57.6
BolC2t10083H Brassica oleracea HOM05D008062 ORTHO05D011707 3.5e-36 156.8 97 86.6
C06p31960 Brassica napus HOM05D008062 ORTHO05D011707 4.6e-36 156.4 97 86.6
C01p37680 Brassica napus HOM05D008062 ORTHO05D011707 3.0e-35 153.7 191 59.7
BolC1t03732H Brassica oleracea HOM05D008062 ORTHO05D011707 1.8e-32 144.4 97 81.4
C03p49830 Brassica napus HOM05D008062 ORTHO05D097306 4.6e-28 129.8 153 90.8
BolC4t23183H Brassica oleracea HOM05D008062 ORTHO05D039396 5.7e-26 122.9 148 73.0
C01p37500 Brassica napus HOM05D008062 ORTHO05D011707 4.1e-24 116.7 195 54.9
BolC6t38323H Brassica oleracea HOM05D008062 ORTHO05D011707 4.1e-24 116.7 60 98.3
BcaB01g01062 Brassica carinata HOM05D008062 ORTHO05D011558 9.0e-24 115.5 326 60.1
BcaC02g11391 Brassica carinata HOM05D008062 ORTHO05D039396 4.2e-21 106.7 182 65.9
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 5.5e-21 106.3 57 94.7
BolC9t57521H Brassica oleracea HOM05D008062 ORTHO05D032683 1.6e-20 104.8 57 94.7
BcaC09g49355 Brassica carinata HOM05D008062 ORTHO05D011707 2.7e-20 104.0 101 64.4
C03p64700 Brassica napus HOM05D008062 ORTHO05D102373 6.1e-20 102.8 154 87.0
BolC3t19919H Brassica oleracea HOM05D008062 ORTHO05D104877 3.9e-19 100.1 57 87.7
C05p06170 Brassica napus HOM05D008062 ORTHO05D011707 1.1e-18 98.6 108 97.2
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 1.5e-18 98.2 57 89.5
BcaB05g22898 Brassica carinata HOM05D008062 ORTHO05D093580 5.7e-18 96.3 346 50.9
BolC8t49897H Brassica oleracea HOM05D008062 ORTHO05D032683 2.8e-17 94.0 52 92.3
BcaC03g14129 Brassica carinata HOM05D008062 ORTHO05D011707 6.9e-16 89.4 93 66.7
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 7.7e-15 85.9 45 95.6
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 6.5e-14 82.8 44 93.2
BraA07t28439Z Brassica rapa HOM05D008062 ORTHO05D108804 1.4e-13 81.6 153 69.3
C08p22600 Brassica napus HOM05D008062 ORTHO05D011707 9.4e-13 79.0 69 71.0
BolC8t49898H Brassica oleracea HOM05D008062 ORTHO05D011707 9.4e-13 79.0 69 71.0
A07p06470 Brassica napus HOM05D008062 ORTHO05D011707 1.2e-12 78.6 126 73.0
A01p20640 Brassica napus HOM05D008062 ORTHO05D008395 2.1e-12 77.8 43 90.7
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 2.7e-12 77.4 43 97.7
BolC1t03719H Brassica oleracea HOM05D008062 ORTHO05D105478 3.0e-11 73.9 37 91.9
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 3.9e-11 73.6 45 86.7
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 2.2e-09 67.8 79 54.4
BcaB04g17944 Brassica carinata HOM05D008062 ORTHO05D092565 4.1e-08 63.5 82 48.8
BcaB04g19856 Brassica carinata HOM05D008062 ORTHO05D093898 4.5e-07 60.1 79 50.6
BcaB02g07320 Brassica carinata HOM05D008062 ORTHO05D092675 1.0e-06 58.9 53 60.4
BcaB05g24203 Brassica carinata HOM05D008062 ORTHO05D091608 2.2e-06 57.8 71 49.3
C08p06790 Brassica napus HOM05D008062 ORTHO05D042315 6.5e-06 56.2 79 49.4


User provided reference genes

Program Settings