Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p03530 Brassica napus HOM05D010843 ORTHO05D012975 1.1e-51 206.5 108 100.0
BolC8t47157H Brassica oleracea HOM05D010843 ORTHO05D012975 1.1e-51 206.5 108 100.0
A08p35300 Brassica napus HOM05D010843 ORTHO05D012975 9.9e-50 199.9 108 96.3
BraA08t35439Z Brassica rapa HOM05D010843 ORTHO05D012975 3.8e-49 198.0 108 95.4
AL1G18590 Arabidopsis lyrata HOM05D010843 ORTHO05D012975 2.7e-39 165.2 112 81.2
A06p05240 Brassica napus HOM05D010843 ORTHO05D012975 8.7e-38 160.2 108 79.6
BraA06t23731Z Brassica rapa HOM05D010843 ORTHO05D012975 8.7e-38 160.2 108 79.6
Thhalv10009156m.g Eutrema salsugineum HOM05D010843 ORTHO05D012975 9.7e-37 156.8 112 79.5
AT1G08180 Arabidopsis thaliana HOM05D010843 ORTHO05D012975 1.8e-35 152.5 112 76.8
Sp1g06830 Schrenkiella parvula HOM05D010843 ORTHO05D012975 5.3e-35 151.0 110 76.4
CARHR008010 Cardamine hirsuta HOM05D010843 ORTHO05D012975 4.5e-34 147.9 113 76.1
BcaC05g24738 Brassica carinata HOM05D010843 ORTHO05D012975 1.0e-33 146.7 112 75.9
BolC5t29387H Brassica oleracea HOM05D010843 ORTHO05D012975 1.0e-33 146.7 112 75.9
C05p06300 Brassica napus HOM05D010843 ORTHO05D012975 2.9e-33 145.2 110 74.5
Carub.0001s0754 Capsella rubella HOM05D010843 ORTHO05D012975 1.4e-32 142.9 110 73.6
BcaB07g34064 Brassica carinata HOM05D010843 ORTHO05D012975 1.9e-32 142.5 108 72.2
BcaB03g13351 Brassica carinata HOM05D010843 ORTHO05D012975 7.9e-31 137.1 74 98.6
BcaB03g13350 Brassica carinata HOM05D010843 ORTHO05D012975 6.7e-30 134.0 77 96.1
THA.LOC104827410 Tarenaya hassleriana HOM05D010843 ORTHO05D012975 2.3e-14 82.4 108 51.9
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 3.6e-07 58.5 122 38.5
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.0e-06 57.0 98 39.8
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.0e-06 57.0 82 43.9
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 1.8e-06 56.2 69 46.4
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.3e-06 55.8 123 36.6
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.3e-06 55.8 82 45.1
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 4.0e-06 55.1 98 35.7
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 4.0e-06 55.1 121 37.2
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 5.2e-06 54.7 116 38.8
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 6.7e-06 54.3 55 52.7
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 6.7e-06 54.3 68 48.5
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 8.8e-06 53.9 58 48.3
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 8.8e-06 53.9 58 48.3
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 8.8e-06 53.9 55 50.9


User provided reference genes

Program Settings