Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p02910 Brassica napus HOM05D000566 ORTHO05D041332 1.1e-56 223.4 136 100.0
BolC8t47078H Brassica oleracea HOM05D000566 ORTHO05D041332 5.1e-51 204.5 136 94.1
C08p02830 Brassica napus HOM05D000566 ORTHO05D000686 9.0e-48 193.7 135 91.9
BolC8t47087H Brassica oleracea HOM05D000566 ORTHO05D000686 9.0e-48 193.7 135 91.9
BcaB03g13406 Brassica carinata HOM05D000566 ORTHO05D000686 5.4e-45 184.5 135 88.9
A08p35780 Brassica napus HOM05D000566 ORTHO05D000686 1.8e-43 179.5 120 95.0
BraA08t35485Z Brassica rapa HOM05D000566 ORTHO05D000686 1.8e-43 179.5 120 95.0
Carub.0001s0640 Capsella rubella HOM05D000566 ORTHO05D000686 9.0e-40 167.2 135 81.5
AL1G17240 Arabidopsis lyrata HOM05D000566 ORTHO05D000686 3.2e-37 158.7 135 74.1
Thhalv10007909m.g Eutrema salsugineum HOM05D000566 ORTHO05D000686 5.6e-34 147.9 136 66.2
CARHR006810 Cardamine hirsuta HOM05D000566 ORTHO05D000686 9.6e-34 147.1 136 75.7
AT1G07120 Arabidopsis thaliana HOM05D000566 ORTHO05D000686 6.5e-30 134.4 135 68.1
THA.LOC104815807 Tarenaya hassleriana HOM05D000566 ORTHO05D000686 1.4e-29 133.3 135 59.3
Aa31LG1G6360 Aethionema arabicum HOM05D000566 ORTHO05D000686 2.7e-12 75.9 83 53.0
Dinv09642 Davidia involucrata HOM05D000566 ORTHO05D000686 2.0e-10 69.7 78 50.0
Glyma.11G171900 Glycine max HOM05D000566 ORTHO05D000686 4.4e-10 68.6 131 36.6
Cpa.g.sc2.429 Carica papaya HOM05D000566 ORTHO05D000686 5.7e-10 68.2 117 37.6
Thecc.09G352100 Theobroma cacao HOM05D000566 ORTHO05D000686 1.3e-09 67.0 121 51.2
Actinidia23220 Actinidia chinensis HOM05D000566 ORTHO05D000686 1.7e-09 66.6 79 63.3
Duzib170G0424 Durio zibethinus HOM05D000566 ORTHO05D000686 1.7e-09 66.6 126 51.6
Lsat_1_v5_gn_7_85001 Lactuca sativa HOM05D000566 ORTHO05D000686 2.2e-09 66.2 70 51.4
COL.COLO4_11093 Corchorus olitorius HOM05D000566 ORTHO05D000686 3.7e-09 65.5 114 50.9
Manes.18G144100 Manihot esculenta HOM05D000566 ORTHO05D000686 3.7e-09 65.5 119 36.1
Sp1g05870 Schrenkiella parvula HOM05D000566 ORTHO05D000686 3.7e-09 65.5 124 44.4
ECA236G3728 Erigeron canadensis HOM05D000566 ORTHO05D000686 4.8e-09 65.1 99 40.4
Haze_24367 Corylus avellana HOM05D000566 ORTHO05D000686 6.3e-09 64.7 107 39.3
Potri.009G073600 Populus trichocarpa HOM05D000566 ORTHO05D000686 6.3e-09 64.7 123 37.4
Sabra16G0172800 Salix brachista HOM05D000566 ORTHO05D000686 8.2e-09 64.3 116 33.6
CSS0007668 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D000686 1.4e-08 63.5 122 47.5
CSS0033217 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D000686 1.4e-08 63.5 122 47.5
Glyma.11G169800 Glycine max HOM05D000566 ORTHO05D000686 1.4e-08 63.5 129 34.1
CiPaw.14G057200 Carya illinoinensis HOM05D000566 ORTHO05D000686 1.8e-08 63.2 110 39.1
Potri.001G279000 Populus trichocarpa HOM05D000566 ORTHO05D000686 1.8e-08 63.2 99 37.4
vmacro02948 Vaccinium macrocarpon HOM05D000566 ORTHO05D000686 2.4e-08 62.8 128 36.7
CiPaw.13G074500 Carya illinoinensis HOM05D000566 ORTHO05D000686 3.1e-08 62.4 78 61.5
Rhsim13G0067600 Rhododendron simsii HOM05D000566 ORTHO05D000686 4.1e-08 62.0 97 50.5
Sabra09G0055700 Salix brachista HOM05D000566 ORTHO05D000686 4.1e-08 62.0 99 37.4
Cfa011729 Carpinus fangiana HOM05D000566 ORTHO05D000686 1.2e-07 60.5 102 57.8
MD03G1065000 Malus domestica HOM05D000566 ORTHO05D000686 1.5e-07 60.1 88 40.9
HanXRQChr16g0507591 Helianthus annuus HOM05D000566 ORTHO05D000686 2.6e-07 59.3 66 50.0
MD11G1069000 Malus domestica HOM05D000566 ORTHO05D000686 5.9e-07 58.2 89 41.6
Eucgr.J01897 Eucalyptus grandis HOM05D000566 ORTHO05D000686 1.0e-06 57.4 99 36.4
Gohir.A03G028600 Gossypium hirsutum HOM05D000566 ORTHO05D000686 1.3e-06 57.0 129 34.1
Prupe.6G053900 Prunus persica HOM05D000566 ORTHO05D000686 3.8e-06 55.5 79 39.2
QL01p039102 Quercus lobata HOM05D000566 ORTHO05D000686 6.5e-06 54.7 122 45.1
RcHm_v2.0_Chr5g0070381 Rosa chinensis HOM05D000566 ORTHO05D000686 6.5e-06 54.7 95 37.9
TWI79G1690 Tripterygium wilfordii HOM05D000566 ORTHO05D000686 6.5e-06 54.7 129 36.4
TAR633G1772 Trochodendron aralioides HOM05D000566 ORTHO05D000686 6.5e-06 54.7 70 47.1
Glyma.18G060701 Glycine max HOM05D000566 ORTHO05D000686 8.5e-06 54.3 133 31.6


User provided reference genes

Program Settings