Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 2.0e-128 462.6 269 100.0
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 1.5e-86 323.6 277 75.8
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 1.6e-85 320.1 267 77.5
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 1.8e-84 316.6 270 75.2
BcaC07g36810 Brassica carinata HOM05D000181 ORTHO05D002783 1.2e-80 303.9 223 88.8
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 6.5e-74 281.6 247 75.3
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 2.3e-71 273.1 285 65.6
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 6.7e-71 271.6 268 70.5
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 3.3e-70 269.2 276 68.1
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 4.8e-69 265.4 267 69.7
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 2.4e-68 263.1 261 68.2
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 9.1e-68 261.2 276 65.2
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 2.9e-66 256.1 261 69.0
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 1.4e-65 253.8 263 68.1
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 1.6e-64 250.4 261 65.5
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 4.4e-62 242.3 259 54.4
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 2.6e-51 206.5 230 53.9
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 3.8e-50 202.6 290 43.8
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 1.5e-41 174.1 283 39.9
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 8.3e-37 158.3 286 38.8
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 1.1e-36 157.9 258 39.9
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 1.4e-36 157.5 284 38.4
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 2.0e-35 153.7 263 37.6
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 2.7e-35 153.3 262 38.2
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 4.5e-35 152.5 285 36.5
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 7.7e-35 151.8 258 39.1
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 2.9e-34 149.8 264 38.6
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 6.5e-34 148.7 284 38.4
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 3.2e-33 146.4 244 38.9
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 3.2e-33 146.4 267 36.3
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 1.6e-32 144.1 263 36.9
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 1.6e-32 144.1 258 39.9
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 2.8e-32 143.3 274 48.2
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 3.6e-32 142.9 266 42.1
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 3.6e-32 142.9 266 42.1
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 4.7e-32 142.5 259 37.1
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 8.0e-32 141.7 261 37.9
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 1.4e-31 141.0 262 35.9
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 1.4e-31 141.0 270 35.2
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 2.3e-31 140.2 291 35.7
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 2.3e-31 140.2 264 38.3
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 4.0e-31 139.4 260 35.8
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 5.2e-31 139.0 270 37.4
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 5.2e-31 139.0 291 35.7
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 8.8e-31 138.3 291 35.4
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 1.2e-30 137.9 269 45.4
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 4.4e-30 136.0 268 35.8
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 8.3e-29 131.7 261 36.4
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 8.3e-29 131.7 265 46.0
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 3.1e-28 129.8 261 39.1
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 3.1e-28 129.8 283 33.9
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 7.0e-28 128.6 267 34.5
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 1.2e-27 127.9 272 34.2
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 1.2e-27 127.9 261 34.1
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 1.6e-27 127.5 266 40.2
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 2.0e-27 127.1 262 36.3
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 2.7e-27 126.7 275 45.5
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 2.7e-27 126.7 280 34.3
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 3.5e-27 126.3 262 35.9
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 4.5e-27 125.9 269 36.1
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 4.5e-27 125.9 256 33.6
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 4.5e-27 125.9 271 34.3
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 7.8e-27 125.2 267 33.3
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 1.3e-26 124.4 276 34.1
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 1.7e-26 124.0 273 33.3
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 2.3e-26 123.6 259 32.8
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 2.9e-26 123.2 274 34.7
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 8.6e-26 121.7 257 34.2
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 1.1e-25 121.3 273 32.6
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 1.5e-25 120.9 263 33.1
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 3.3e-25 119.8 283 32.2
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 4.3e-25 119.4 269 33.5
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 9.5e-25 118.2 260 33.5
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 1.6e-24 117.5 286 32.2
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 4.7e-24 115.9 281 32.4
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 1.4e-23 114.4 269 33.5
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 3.0e-23 113.2 257 31.9
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 5.2e-23 112.5 265 33.6
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 1.2e-22 111.3 278 34.2
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 4.4e-22 109.4 263 32.7
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 4.4e-22 109.4 262 32.1
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 7.5e-22 108.6 267 34.1
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 2.2e-21 107.1 94 52.1
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 2.2e-21 107.1 257 30.0
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 3.7e-21 106.3 264 33.7
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 8.3e-21 105.1 282 30.9
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 8.3e-21 105.1 96 50.0
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 7.0e-20 102.1 94 50.0
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 8.6e-18 95.1 159 35.2
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 1.9e-17 94.0 95 48.4
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 2.5e-17 93.6 275 28.4
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 5.6e-17 92.4 252 30.2
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 2.1e-16 90.5 95 49.5
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 3.7e-13 79.7 232 27.6
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 6.4e-13 79.0 76 50.0
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 3.5e-11 73.2 218 30.3
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 3.0e-10 70.1 95 37.9
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 3.9e-10 69.7 280 25.7
Sc21g0004320 Simmondsia chinensis HOM05D007438 ORTHO05D009395 8.6e-10 68.6 58 63.8
Phvul.003G195300 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 2.1e-08 63.9 60 55.0


User provided reference genes

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