Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p02090 Brassica napus HOM05D009521 ORTHO05D013247 1.4e-125 453.0 233 100.0
C05p29730 Brassica napus HOM05D009521 ORTHO05D013247 1.3e-86 323.6 228 78.1
C03p18340 Brassica napus HOM05D009521 ORTHO05D013247 5.0e-38 162.2 117 72.6
BraA03t10622Z Brassica rapa HOM05D009521 ORTHO05D013247 1.2e-28 131.0 238 41.2
BcaB04g17620 Brassica carinata HOM05D009521 ORTHO05D013247 3.9e-27 125.9 240 41.2
BcaC05g27090 Brassica carinata HOM05D009521 ORTHO05D013247 8.8e-27 124.8 68 88.2
BcaB03g16558 Brassica carinata HOM05D000003 ORTHO05D000006 1.2e-23 114.4 238 38.2
BraA10t43181Z Brassica rapa HOM05D009521 ORTHO05D016806 2.9e-22 109.8 231 39.8
BcaB05g21810 Brassica carinata HOM05D009521 ORTHO05D013247 2.5e-21 106.7 167 45.5
BolC8t50915H Brassica oleracea HOM05D009521 ORTHO05D013247 2.5e-21 106.7 243 36.2
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 1.2e-20 104.4 237 38.4
BolC8t47401H Brassica oleracea HOM05D009521 ORTHO05D013247 1.2e-20 104.4 240 37.5
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-20 103.2 221 36.2
BcaC03g14454 Brassica carinata HOM05D009521 ORTHO05D092480 2.7e-20 103.2 123 44.7
C02p64250 Brassica napus HOM05D009521 ORTHO05D039737 3.6e-20 102.8 244 40.2
BcaB04g17578 Brassica carinata HOM05D009521 ORTHO05D021670 8.0e-20 101.7 238 41.2
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 2.3e-19 100.1 246 37.0
BcaNung04087 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-18 97.4 236 37.3
BcaNung02100 Brassica carinata HOM05D009521 ORTHO05D013247 3.3e-18 96.3 103 51.5
BcaC08g45025 Brassica carinata HOM05D009521 ORTHO05D000411 2.2e-17 93.6 205 41.0
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 3.7e-17 92.8 185 42.2
A06p43610 Brassica napus HOM05D009521 ORTHO05D039276 4.8e-17 92.4 221 39.8
BcaB01g03972 Brassica carinata HOM05D001608 ORTHO05D000411 1.4e-16 90.9 240 36.7
BolC9t58563H Brassica oleracea HOM05D009521 ORTHO05D000411 7.0e-16 88.6 162 40.7
BcaB06g26355 Brassica carinata HOM05D009521 ORTHO05D013247 2.0e-15 87.0 139 42.4
C06p36790 Brassica napus HOM05D000385 ORTHO05D027499 4.5e-15 85.9 196 40.3
BcaB03g14951 Brassica carinata HOM05D009521 ORTHO05D013247 2.2e-14 83.6 103 46.6
C01p12130 Brassica napus HOM05D064822 ORTHO05D042739 2.9e-14 83.2 239 36.0
BcaC03g17293 Brassica carinata HOM05D009521 ORTHO05D039276 6.5e-14 82.0 218 35.8
C09p33330 Brassica napus HOM05D000022 ORTHO05D016806 6.5e-14 82.0 113 46.0
BolC6t35268H Brassica oleracea HOM05D009521 ORTHO05D013247 6.5e-14 82.0 163 39.3
BolC9t56170H Brassica oleracea HOM05D000022 ORTHO05D016806 6.5e-14 82.0 113 46.0
BcaC08g43434 Brassica carinata HOM05D009521 ORTHO05D013247 8.5e-14 81.6 161 40.4
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-13 81.3 149 43.0
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 3.2e-13 79.7 222 34.7
BcaC02g11021 Brassica carinata HOM05D000003 ORTHO05D000925 9.4e-13 78.2 156 41.7
BolC7t46676H Brassica oleracea HOM05D009521 ORTHO05D013247 3.6e-12 76.3 151 37.1
BcaC08g45878 Brassica carinata HOM05D000385 ORTHO05D027499 1.8e-11 73.9 186 37.1
BcaC09g47652 Brassica carinata HOM05D000003 ORTHO05D000006 1.8e-11 73.9 223 30.0
BcaC04g21213 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-11 73.6 222 35.1
A10p14000 Brassica napus HOM05D011474 ORTHO05D021753 4.0e-11 72.8 206 34.0
BraA10t43491Z Brassica rapa HOM05D011474 ORTHO05D021753 4.0e-11 72.8 206 34.0
BcaC04g23248 Brassica carinata HOM05D058839 ORTHO05D039755 5.2e-11 72.4 77 54.5
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-11 72.0 202 34.7
BolC6t38788H Brassica oleracea HOM05D000385 ORTHO05D027499 6.7e-11 72.0 161 39.1
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-11 71.6 139 41.7
BcaC02g09343 Brassica carinata HOM05D000003 ORTHO05D021670 8.8e-11 71.6 205 34.1
BcaC08g42860 Brassica carinata HOM05D011474 ORTHO05D027115 3.3e-10 69.7 166 37.3
BcaC01g05127 Brassica carinata HOM05D002825 ORTHO05D003824 7.5e-10 68.6 185 36.2
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-09 67.4 237 30.4
BcaC07g36967 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-09 67.0 139 41.0
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-09 66.6 137 41.6
BcaC04g23888 Brassica carinata HOM05D011474 ORTHO05D027115 3.7e-09 66.2 172 36.0
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 3.7e-09 66.2 149 38.9
BolC6t36503H Brassica oleracea HOM05D000106 ORTHO05D000160 6.3e-09 65.5 232 30.6
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-09 65.1 256 31.2
BraA02t05709Z Brassica rapa HOM05D011474 ORTHO05D016098 1.8e-08 63.9 239 33.1
BcaB05g22665 Brassica carinata HOM05D011474 ORTHO05D021753 5.3e-08 62.4 128 39.8
BcaC04g18995 Brassica carinata HOM05D040003 ORTHO05D031801 9.1e-08 61.6 93 47.3
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-07 60.5 146 37.7
BcaB01g06142 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-07 60.1 135 38.5
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-07 59.7 164 29.9
BcaB08g35380 Brassica carinata HOM05D009521 ORTHO05D027438 3.5e-07 59.7 190 34.7
BcaB04g17526 Brassica carinata HOM05D009972 ORTHO05D012287 4.5e-07 59.3 118 42.4
BcaC07g38371 Brassica carinata HOM05D009521 ORTHO05D027438 4.5e-07 59.3 113 39.8
C03p90150 Brassica napus HOM05D009521 ORTHO05D000411 7.7e-07 58.5 139 36.0
BcaB08g34737 Brassica carinata HOM05D011474 ORTHO05D021753 1.0e-06 58.2 92 40.2
BcaC02g12560 Brassica carinata HOM05D011474 ORTHO05D021753 1.3e-06 57.8 167 32.9
C03p41040 Brassica napus HOM05D011474 ORTHO05D021753 2.2e-06 57.0 104 33.7
BcaB05g25017 Brassica carinata HOM05D011474 ORTHO05D000006 5.0e-06 55.8 143 35.7


User provided reference genes

Program Settings