Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p00580 Brassica napus HOM05D003268 ORTHO05D003719 2.3e-125 452.2 226 100.0
C08p49440 Brassica napus HOM05D003268 ORTHO05D003719 1.4e-117 426.4 226 96.0
A09p65470 Brassica napus HOM05D003268 ORTHO05D003719 7.3e-111 404.1 225 91.1
BraA09t41892Z Brassica rapa HOM05D003268 ORTHO05D003719 7.3e-111 404.1 225 91.1
BolC8t52481H Brassica oleracea HOM05D003268 ORTHO05D003719 2.8e-78 295.8 153 94.1
A06p06210 Brassica napus HOM05D003268 ORTHO05D003719 5.3e-77 291.6 227 68.7
BraA06t23832Z Brassica rapa HOM05D003268 ORTHO05D003719 5.3e-77 291.6 227 68.7
C05p07520 Brassica napus HOM05D003268 ORTHO05D003719 9.9e-76 287.3 215 70.2
BolC5t29506H Brassica oleracea HOM05D003268 ORTHO05D003719 9.9e-76 287.3 215 70.2
Sp1g08120 Schrenkiella parvula HOM05D003268 ORTHO05D003719 1.7e-72 276.6 251 62.9
BcaC07g41877 Brassica carinata HOM05D003268 ORTHO05D003719 4.0e-69 265.4 227 72.7
BcaC07g36965 Brassica carinata HOM05D003268 ORTHO05D003719 1.4e-66 256.9 124 96.8
A08p34520 Brassica napus HOM05D003268 ORTHO05D003719 2.1e-65 253.1 225 60.9
BraA08t35363Z Brassica rapa HOM05D003268 ORTHO05D003719 1.0e-64 250.8 214 64.0
Thhalv10008580m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 5.1e-64 248.4 233 61.4
C08p12950 Brassica napus HOM05D003268 ORTHO05D003719 1.3e-62 243.8 195 65.6
BolC8t48925H Brassica oleracea HOM05D003268 ORTHO05D003719 3.7e-62 242.3 195 64.1
AT1G09520 Arabidopsis thaliana HOM05D003268 ORTHO05D003719 1.1e-61 240.7 217 62.2
BraA08t35364Z Brassica rapa HOM05D003268 ORTHO05D003719 1.1e-61 240.7 195 67.7
Carub.0001s0886 Capsella rubella HOM05D003268 ORTHO05D003719 5.3e-61 238.4 224 59.8
AL1G20040 Arabidopsis lyrata HOM05D003268 ORTHO05D003719 9.0e-61 237.7 214 61.7
A08p34530 Brassica napus HOM05D003268 ORTHO05D003719 2.6e-60 236.1 194 65.5
BcaC07g38514 Brassica carinata HOM05D003268 ORTHO05D003719 3.5e-57 225.7 190 63.7
CARHR009490 Cardamine hirsuta HOM05D003268 ORTHO05D003719 1.0e-56 224.2 220 57.3
Aa31LG1G5560 Aethionema arabicum HOM05D003268 ORTHO05D003719 2.5e-47 193.0 222 48.6
BcaC07g38513 Brassica carinata HOM05D003268 ORTHO05D003719 1.8e-45 186.8 228 50.0
THA.LOC104820490 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 4.1e-45 185.7 203 49.3
THA.LOC104816841 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 1.0e-43 181.0 202 47.5
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 4.5e-36 155.6 162 51.2
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 2.5e-34 149.8 199 46.2
Duzib128G0788 Durio zibethinus HOM05D003268 ORTHO05D003719 1.2e-33 147.5 215 42.8
COL.COLO4_05489 Corchorus olitorius HOM05D003268 ORTHO05D003719 1.6e-33 147.1 184 46.7
Thecc.05G329300 Theobroma cacao HOM05D003268 ORTHO05D003719 3.0e-32 142.9 193 46.6
Gohir.D13G184200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.1e-31 141.0 171 48.5
Gorai.013G209800 Gossypium raimondii HOM05D003268 ORTHO05D003719 1.1e-31 141.0 171 48.5
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 4.4e-31 139.0 213 44.6
Gohir.A13G177600 Gossypium hirsutum HOM05D003268 ORTHO05D003719 5.7e-31 138.7 190 46.3
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 3.1e-29 132.9 177 45.2
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 3.1e-29 132.9 173 45.1
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 2.9e-27 126.3 213 40.4
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 5.0e-27 125.6 182 44.5
Ciclev10013870m.g Citrus clementina HOM05D003268 ORTHO05D003719 6.5e-27 125.2 143 49.7
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 6.5e-27 125.2 182 44.0
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 3.2e-26 122.9 171 45.0
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 3.2e-26 122.9 202 41.6
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 3.2e-26 122.9 202 41.6
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 4.2e-26 122.5 197 40.1
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 7.2e-26 121.7 167 43.7
Sc16g0009390 Simmondsia chinensis HOM05D003268 ORTHO05D003719 2.7e-25 119.8 169 40.8
FAN02G3445 Fragaria x ananassa HOM05D003268 ORTHO05D003719 3.6e-25 119.4 216 39.8
Atru.chr12.1545 Acer truncatum HOM05D003268 ORTHO05D003719 6.1e-25 118.6 164 44.5
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 2.3e-24 116.7 161 44.1
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 2.6e-23 113.2 175 40.6
Atru.chr4.3150 Acer truncatum HOM05D003268 ORTHO05D003719 3.3e-23 112.8 169 40.2
Medtr1g484850 Medicago truncatula HOM05D003268 ORTHO05D003719 9.7e-23 111.3 189 38.6
THA.LOC104821812 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 2.8e-22 109.8 153 43.1
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 3.7e-22 109.4 175 42.3
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 4.8e-22 109.0 209 39.2
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 4.8e-22 109.0 194 38.1
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 6.3e-22 108.6 176 43.2
CiPaw.01G129300 Carya illinoinensis HOM05D003268 ORTHO05D003719 8.2e-22 108.2 181 40.3
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 2.4e-21 106.7 190 35.3
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 3.1e-21 106.3 182 38.5
Gohir.D02G064200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 4.1e-21 105.9 185 35.7
Gorai.005G072500 Gossypium raimondii HOM05D003268 ORTHO05D003719 4.1e-21 105.9 185 35.7
Gohir.A02G058400 Gossypium hirsutum HOM05D003268 ORTHO05D003719 7.0e-21 105.1 185 36.8
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 7.0e-21 105.1 169 40.2
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 1.2e-20 104.4 191 38.2
Lj5g0018140 Lotus japonicus HOM05D003268 ORTHO05D003719 1.6e-20 104.0 183 37.7
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 1.6e-20 104.0 202 37.1
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 1.6e-20 104.0 202 37.1
FAN09G1400 Fragaria x ananassa HOM05D003268 ORTHO05D003719 2.0e-20 103.6 206 36.9
PGR031G0843 Punica granatum HOM05D003268 ORTHO05D003719 2.0e-20 103.6 232 34.1
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 2.7e-20 103.2 191 37.7
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 3.5e-20 102.8 193 39.9
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 3.5e-20 102.8 194 40.2
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 3.5e-20 102.8 181 39.2
QL03p010269 Quercus lobata HOM05D003268 ORTHO05D003719 4.5e-20 102.4 186 38.2
QL03p010503 Quercus lobata HOM05D003268 ORTHO05D003719 4.5e-20 102.4 186 38.2
Thecc.04G313000 Theobroma cacao HOM05D003268 ORTHO05D003719 4.5e-20 102.4 186 36.0
Duzib212G0032 Durio zibethinus HOM05D003268 ORTHO05D003719 5.9e-20 102.1 185 36.2
Phvul.007G204700 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 5.9e-20 102.1 191 35.6
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 7.7e-20 101.7 185 37.8
MSTRG.16427 Avicennia marina HOM05D003268 ORTHO05D003719 1.0e-19 101.3 179 39.1
MBI19_g47476_MAGBIO Magnolia biondii HOM05D003268 ORTHO05D003719 1.7e-19 100.5 162 40.1
SGA_v2.0_scaffold22G09705 Striga asiatica HOM05D003268 ORTHO05D003719 1.7e-19 100.5 195 39.5
Cfa015729 Carpinus fangiana HOM05D003268 ORTHO05D003719 2.2e-19 100.1 161 40.4
Lj6P701T18 Lonicera japonica HOM05D003268 ORTHO05D003719 2.9e-19 99.8 188 34.6
PSO170G4270 Papaver somniferum HOM05D003268 ORTHO05D003719 2.9e-19 99.8 185 36.2
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 3.8e-19 99.4 174 39.7
Ca_10197_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 5.0e-19 99.0 187 35.3
TAR362G1252 Trochodendron aralioides HOM05D003268 ORTHO05D003719 5.0e-19 99.0 204 36.3
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 1.1e-18 97.8 205 36.6
VMungo0720G1780 Vigna mungo HOM05D003268 ORTHO05D003719 1.1e-18 97.8 198 34.3
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 1.5e-18 97.4 174 39.1
ECA240G0886 Erigeron canadensis HOM05D003268 ORTHO05D003719 1.5e-18 97.4 173 39.3
Aa31LG1G5600 Aethionema arabicum HOM05D003268 ORTHO05D003719 1.9e-18 97.1 117 44.4
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 1.9e-18 97.1 178 35.4
Psat6g155480 Pisum sativum HOM05D003268 ORTHO05D003719 2.5e-18 96.7 199 34.7
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 3.2e-18 96.3 175 38.3
Dinv29508 Davidia involucrata HOM05D003268 ORTHO05D003719 4.2e-18 95.9 170 37.1
Potri.010G002200 Populus trichocarpa HOM05D003268 ORTHO05D003719 4.2e-18 95.9 172 38.4
Glyma.10G143800 Glycine max HOM05D003268 ORTHO05D003719 9.4e-18 94.7 198 34.8
Lalb_Chr02g0147571 Lupinus albus HOM05D003268 ORTHO05D003719 9.4e-18 94.7 200 35.0
TPR.G2590 Trifolium pratense HOM05D003268 ORTHO05D003719 9.4e-18 94.7 209 35.4
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 1.2e-17 94.4 183 35.0
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 1.2e-17 94.4 191 36.6
PSO761G0464 Papaver somniferum HOM05D003268 ORTHO05D003719 1.2e-17 94.4 178 35.4
Aa31LG8G4410 Aethionema arabicum HOM05D002272 ORTHO05D005405 1.6e-17 94.0 190 36.3
Migut.N00971 Erythranthe guttata HOM05D003268 ORTHO05D003719 1.6e-17 94.0 168 38.7
Migut.O00762 Erythranthe guttata HOM05D003268 ORTHO05D003719 3.6e-17 92.8 158 40.5
Glyma.20G092502 Glycine max HOM05D003268 ORTHO05D003719 3.6e-17 92.8 159 37.7
PSO210G7784 Papaver somniferum HOM05D003268 ORTHO05D003719 3.6e-17 92.8 178 35.4
Sabra10G0001700 Salix brachista HOM05D003268 ORTHO05D003719 3.6e-17 92.8 172 38.4
vmacro01600 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 3.6e-17 92.8 145 40.0
Lalb_Chr13g0299031 Lupinus albus HOM05D003268 ORTHO05D003719 4.7e-17 92.4 167 35.3
Oeu020279.1 Olea europaea HOM05D003268 ORTHO05D003719 8.0e-17 91.7 180 36.1
Ciclev10005819m.g Citrus clementina HOM05D003268 ORTHO05D003719 3.0e-16 89.7 187 34.8
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 3.0e-16 89.7 169 34.3
Lalb_Chr06g0167311 Lupinus albus HOM05D003268 ORTHO05D003719 3.0e-16 89.7 205 33.7
Rhsim11G0103200 Rhododendron simsii HOM05D003268 ORTHO05D003719 3.0e-16 89.7 167 36.5
TWI09G0361 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 3.0e-16 89.7 165 34.5
VMungo1215G0793 Vigna mungo HOM05D003268 ORTHO05D003719 6.8e-16 88.6 187 34.8
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 8.8e-16 88.2 222 32.9
HanXRQChr09g0250221 Helianthus annuus HOM05D003268 ORTHO05D003719 1.2e-15 87.8 184 37.5
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 2.0e-15 87.0 207 32.9
MSTRG.20352 Avicennia marina HOM05D003268 ORTHO05D003719 4.4e-15 85.9 173 34.1
DCAR_001893 Daucus carota HOM05D003268 ORTHO05D003719 9.8e-15 84.7 192 32.3
Oeu034985.1 Olea europaea HOM05D003268 ORTHO05D003719 9.8e-15 84.7 182 35.7
Phvul.003G123200 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 9.8e-15 84.7 169 34.3
Ah.10g026900 Amaranthus hybridus HOM05D003268 ORTHO05D003719 2.2e-14 83.6 194 32.0
MELO3C006751.2 Cucumis melo HOM05D003268 ORTHO05D003719 2.8e-14 83.2 211 34.1
RcHm_v2.0_Chr4g0427521 Rosa chinensis HOM05D003268 ORTHO05D003719 3.7e-14 82.8 178 34.8
SHI00050 Sapria himalayana HOM05D002272 ORTHO05D005405 3.7e-14 82.8 187 33.2
BcaC09g48706 Brassica carinata HOM05D003268 ORTHO05D003719 4.8e-14 82.4 166 37.3
BolC1t04640H Brassica oleracea HOM05D003268 ORTHO05D003719 4.8e-14 82.4 166 37.3
MD16G1136300 Malus domestica HOM05D003268 ORTHO05D003719 4.8e-14 82.4 193 34.7
SalBow5G1243 Salvia bowleyana HOM05D003268 ORTHO05D003719 4.8e-14 82.4 164 36.6
MD13G1139400 Malus domestica HOM05D003268 ORTHO05D003719 8.3e-14 81.6 170 37.1
BcaB04g20839 Brassica carinata HOM05D003268 ORTHO05D003719 1.1e-13 81.3 170 35.9
Thhalv10022081m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 1.1e-13 81.3 202 33.2
Sed0001415 Sechium edule HOM05D003268 ORTHO05D003719 1.1e-13 81.3 169 36.1
ECA234G2755 Erigeron canadensis HOM05D003268 ORTHO05D003719 1.8e-13 80.5 177 35.0
Sed0010166 Sechium edule HOM05D003268 ORTHO05D003719 1.8e-13 80.5 187 33.2
Lalb_Chr07g0181591 Lupinus albus HOM05D003268 ORTHO05D003719 3.1e-13 79.7 191 33.0
BcaC05g28789 Brassica carinata HOM05D003268 ORTHO05D003719 4.1e-13 79.3 145 34.5
unitig_8.g4507 Utricularia gibba HOM05D003268 ORTHO05D003719 7.0e-13 78.6 223 30.9
BcaC09g48702 Brassica carinata HOM05D003268 ORTHO05D003719 9.1e-13 78.2 182 34.1
C01p46780 Brassica napus HOM05D003268 ORTHO05D003719 9.1e-13 78.2 182 34.1
BolC1t04651H Brassica oleracea HOM05D003268 ORTHO05D003719 9.1e-13 78.2 182 34.1
PGSC0003DMG400044873 Solanum tuberosum HOM05D003268 ORTHO05D003719 1.6e-12 77.4 169 33.7
C05p48980 Brassica napus HOM05D003268 ORTHO05D003719 4.5e-12 75.9 145 34.5
BolC5t33638H Brassica oleracea HOM05D003268 ORTHO05D003719 4.5e-12 75.9 145 34.5
HanXRQChr10g0294291 Helianthus annuus HOM05D003268 ORTHO05D003719 4.5e-12 75.9 174 32.2
Ca_21366_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 5.9e-12 75.5 189 32.8
Aqoxy2G02513 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 7.7e-12 75.1 173 32.9
Medtr4g124100 Medicago truncatula HOM05D003268 ORTHO05D003719 7.7e-12 75.1 178 33.1
Sopen10g005750 Solanum pennellii HOM05D003268 ORTHO05D003719 7.7e-12 75.1 147 36.1
HanXRQChr09g0248281 Helianthus annuus HOM05D003268 ORTHO05D003719 1.0e-11 74.7 168 35.1
Migut.B00893 Erythranthe guttata HOM05D003268 ORTHO05D003719 1.3e-11 74.3 190 30.5
Solyc10g011990.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 1.7e-11 73.9 147 36.1
Actinidia17741 Actinidia chinensis HOM05D003268 ORTHO05D003719 2.2e-11 73.6 120 43.3
Potri.008G206600 Populus trichocarpa HOM05D003268 ORTHO05D003719 5.0e-11 72.4 133 36.1
PGSC0003DMG401019388 Solanum tuberosum HOM05D003268 ORTHO05D003719 8.5e-11 71.6 171 30.4
Solyc03g114270.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 1.9e-10 70.5 158 31.0
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 1.9e-10 70.5 158 31.0
Nitab4.5_0001808g0030 Nicotiana tabacum HOM05D003268 ORTHO05D003719 2.5e-10 70.1 154 33.1
TPR.G12613 Trifolium pratense HOM05D003268 ORTHO05D003719 2.5e-10 70.1 195 30.8
Nitab4.5_0000039g0190 Nicotiana tabacum HOM05D003268 ORTHO05D003719 7.2e-10 68.6 154 31.8
Migut.B00880 Erythranthe guttata HOM05D003268 ORTHO05D003719 3.6e-09 66.2 155 32.9
Psat0s1206g0240 Pisum sativum HOM05D003268 ORTHO05D003719 8.0e-09 65.1 195 29.7
CARHR092780 Cardamine hirsuta HOM05D003268 ORTHO05D003719 2.6e-07 60.1 176 29.5
Os05g0277200 Oryza sativa ssp. japonica HOM05D003268 ORTHO05D003719 1.3e-06 57.8 215 27.4
FAN05G0723 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.7e-06 57.4 86 36.0
vmacro22837 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 2.8e-06 56.6 82 40.2


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