Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p00430 Brassica napus HOM05D005702 ORTHO05D007080 1.1e-53 213.0 103 100.0
BolC8t46842H Brassica oleracea HOM05D005702 ORTHO05D007080 3.4e-23 111.7 62 91.9
ClCG09G007100 Citrullus lanatus HOM05D005702 ORTHO05D007080 7.6e-23 110.5 94 67.0
Thhalv10008907m.g Eutrema salsugineum HOM05D005702 ORTHO05D007080 1.3e-19 99.8 147 44.9
EL10Ac7g16708 Beta vulgaris HOM05D005702 ORTHO05D007080 1.7e-19 99.4 52 94.2
CiPaw.08G105700 Carya illinoinensis HOM05D005702 ORTHO05D007080 2.3e-19 99.0 147 43.5
AUR62026977 Chenopodium quinoa HOM05D005702 ORTHO05D007080 2.3e-19 99.0 147 43.5
AUR62029075 Chenopodium quinoa HOM05D005702 ORTHO05D007080 2.3e-19 99.0 147 43.5
Gohir.A08G186200 Gossypium hirsutum HOM05D005702 ORTHO05D007080 2.3e-19 99.0 143 43.4
Medtr7g117040 Medicago truncatula HOM05D005702 ORTHO05D007080 2.3e-19 99.0 147 43.5
COL.COLO4_09081 Corchorus olitorius HOM05D005702 ORTHO05D007080 3.0e-19 98.6 55 85.5
Prupe.8G239800 Prunus persica HOM05D005702 ORTHO05D007080 3.0e-19 98.6 147 42.9
unitig_0.g548 Utricularia gibba HOM05D005702 ORTHO05D007080 3.0e-19 98.6 59 81.4
AL1G12620 Arabidopsis lyrata HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
AT1G03150 Arabidopsis thaliana HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
BcaC05g24554 Brassica carinata HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
BcaC05g24631 Brassica carinata HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
A08p37460 Brassica napus HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
A10p01770 Brassica napus HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
C05p01750 Brassica napus HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
BraA08t35644Z Brassica rapa HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
BraA10t42452Z Brassica rapa HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
Carub.0001s0229 Capsella rubella HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
CARHR002490 Cardamine hirsuta HOM05D005702 ORTHO05D007080 3.9e-19 98.2 147 44.2
Sabra05G0160500 Salix brachista HOM05D005702 ORTHO05D007080 3.9e-19 98.2 55 87.3
Aa31LG1G9380 Aethionema arabicum HOM05D005702 ORTHO05D007080 5.1e-19 97.8 149 43.6
CSS0013604 Camellia sinensis var. sinensis HOM05D005702 ORTHO05D007080 5.1e-19 97.8 147 43.5
Dinv34763 Davidia involucrata HOM05D005702 ORTHO05D007080 5.1e-19 97.8 147 43.5
Oeu047872.1 Olea europaea HOM05D005702 ORTHO05D007080 5.1e-19 97.8 147 43.5
Rhsim01G0274200 Rhododendron simsii HOM05D005702 ORTHO05D007080 5.1e-19 97.8 147 43.5
THA.LOC104815941 Tarenaya hassleriana HOM05D005702 ORTHO05D007080 5.1e-19 97.8 147 43.5
TAR365G0913 Trochodendron aralioides HOM05D005702 ORTHO05D007080 5.1e-19 97.8 147 43.5
ATR0332G108 Amborella trichopoda HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 43.5
arahy.Tifrunner.gnm1.ann1.DZ64CF Arachis hypogaea HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 42.9
arahy.Tifrunner.gnm1.ann1.TC3YPE Arachis hypogaea HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 42.9
MSTRG.17448 Avicennia marina HOM05D005702 ORTHO05D007080 6.6e-19 97.4 59 81.4
Ca_09493_v3 Cicer arietinum L. HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 42.9
Dinv32924 Davidia involucrata HOM05D005702 ORTHO05D007080 6.6e-19 97.4 59 81.4
Duzib138G0620 Durio zibethinus HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 43.5
Migut.N02047 Erythranthe guttata HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 42.9
Glyma.03G154800 Glycine max HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 43.5
MD03G1263400 Malus domestica HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 42.9
RcHm_v2.0_Chr6g0290851 Rosa chinensis HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 42.9
TPR.G4786 Trifolium pratense HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 42.9
vmacro14916 Vaccinium macrocarpon HOM05D005702 ORTHO05D007080 6.6e-19 97.4 147 43.5
Actinidia21118 Actinidia chinensis HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
Actinidia24899 Actinidia chinensis HOM05D005702 ORTHO05D007080 8.7e-19 97.1 59 79.7
Ah.08g211290 Amaranthus hybridus HOM05D005702 ORTHO05D007080 8.7e-19 97.1 51 92.2
Aqoxy5G00486 Aquilegia oxysepala HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
BcaC05g24556 Brassica carinata HOM05D005702 ORTHO05D007080 8.7e-19 97.1 62 77.4
CANSAT25G3124 Cannabis sativa HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
Ciclev10022184m.g Citrus clementina HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
Cc01_g19390 Coffea canephora HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
Duzib211G0381 Durio zibethinus HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
FAN20G0031 Fragaria x ananassa HOM05D005702 ORTHO05D007080 8.7e-19 97.1 52 90.4
Gohir.A08G066400 Gossypium hirsutum HOM05D005702 ORTHO05D007080 8.7e-19 97.1 59 79.7
Gohir.D08G075100 Gossypium hirsutum HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
Gohir.D08G204300 Gossypium hirsutum HOM05D005702 ORTHO05D007080 8.7e-19 97.1 149 42.3
Gorai.004G079400 Gossypium raimondii HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
Gorai.004G216300 Gossypium raimondii HOM05D005702 ORTHO05D007080 8.7e-19 97.1 149 42.3
Manes.01G207200 Manihot esculenta HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
Hund26623 Selenicereus undatus HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
SGA_v2.0_scaffold81G26013 Striga asiatica HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
THA.LOC104825996 Tarenaya hassleriana HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
TWI59G0659 Tripterygium wilfordii HOM05D005702 ORTHO05D007080 8.7e-19 97.1 147 42.2
FvH4_2g23390 Fragaria vesca HOM05D005702 ORTHO05D007080 1.1e-18 96.7 147 42.9
FAN15G2915 Fragaria x ananassa HOM05D005702 ORTHO05D007080 1.1e-18 96.7 147 42.9
FAN24G0191 Fragaria x ananassa HOM05D005702 ORTHO05D007080 1.1e-18 96.7 147 42.9
FAN27G1453 Fragaria x ananassa HOM05D005702 ORTHO05D007080 1.1e-18 96.7 147 42.9
Lj5g0011651 Lotus japonicus HOM05D005702 ORTHO05D007080 1.1e-18 96.7 147 43.5
Phvul.001G152200 Phaseolus vulgaris HOM05D005702 ORTHO05D007080 1.1e-18 96.7 147 42.9
Thecc.01G277400 Theobroma cacao HOM05D005702 ORTHO05D007080 1.1e-18 96.7 147 41.5
GSVIVG01001156001 Vitis vinifera HOM05D005702 ORTHO05D007080 1.1e-18 96.7 147 42.9
Atru.chr5.1454 Acer truncatum HOM05D005702 ORTHO05D007080 1.5e-18 96.3 147 42.2
Atru.chr5.1455 Acer truncatum HOM05D005702 ORTHO05D007080 1.5e-18 96.3 147 42.2
CAN.G308.71 Capsicum annuum HOM05D005702 ORTHO05D007080 1.5e-18 96.3 147 41.5
PSO210G0941 Papaver somniferum HOM05D005702 ORTHO05D007080 1.5e-18 96.3 147 42.9
PSO832G0751 Papaver somniferum HOM05D005702 ORTHO05D007080 1.5e-18 96.3 147 42.9
AUR62019565 Chenopodium quinoa HOM05D005702 ORTHO05D007080 1.9e-18 95.9 59 81.4
MD11G1284200 Malus domestica HOM05D005702 ORTHO05D007080 1.9e-18 95.9 147 41.5
Potri.005G210400 Populus trichocarpa HOM05D005702 ORTHO05D007080 1.9e-18 95.9 147 42.2
Sed0015744 Sechium edule HOM05D005702 ORTHO05D007080 1.9e-18 95.9 147 42.2
Sc24g0002770 Simmondsia chinensis HOM05D005702 ORTHO05D007080 1.9e-18 95.9 147 42.2
HPP92_023571 Vanilla planifolia HOM05D005702 ORTHO05D007080 1.9e-18 95.9 147 41.5
CsaV3_7G028070 Cucumis sativus L. HOM05D005702 ORTHO05D007080 2.5e-18 95.5 147 43.5
Nn4g26287 Nelumbo nucifera HOM05D005702 ORTHO05D007080 2.5e-18 95.5 147 41.5
MSTRG.12560 Avicennia marina HOM05D005702 ORTHO05D007080 3.3e-18 95.1 59 76.3
MELO3C015828.2 Cucumis melo HOM05D005702 ORTHO05D007080 3.3e-18 95.1 147 42.9
Psat3g003080 Pisum sativum HOM05D005702 ORTHO05D007080 3.3e-18 95.1 147 41.5
Hma1.2p1_0822F.1_g224450 Hydrangea macrophylla HOM05D005702 ORTHO05D007080 4.3e-18 94.7 147 42.2
Hma1.2p1_0822F.1_g224460 Hydrangea macrophylla HOM05D005702 ORTHO05D007080 4.3e-18 94.7 147 42.2
Os03g0699400 Oryza sativa ssp. japonica HOM05D005702 ORTHO05D007080 4.3e-18 94.7 147 40.8
Peaxi162Scf00268g00086 Petunia axillaris HOM05D005702 ORTHO05D007080 4.3e-18 94.7 141 41.8
HanXRQChr04g0118891 Helianthus annuus HOM05D005702 ORTHO05D007080 5.6e-18 94.4 147 41.5
Lj1A47G37 Lonicera japonica HOM05D005702 ORTHO05D007080 5.6e-18 94.4 147 41.5
Mapoly0054s0004 Marchantia polymorpha HOM05D005702 ORTHO05D007080 5.6e-18 94.4 75 66.7
PGR044G1983 Punica granatum HOM05D005702 ORTHO05D007080 5.6e-18 94.4 147 40.8
SalBow6G1090 Salvia bowleyana HOM05D005702 ORTHO05D007080 5.6e-18 94.4 147 41.5
Cpa.g.sc52.44 Carica papaya HOM05D005702 ORTHO05D007080 7.3e-18 94.0 147 41.5
ECA236G5031 Erigeron canadensis HOM05D005702 ORTHO05D007080 7.3e-18 94.0 147 41.5
Eucgr.K03364 Eucalyptus grandis HOM05D005702 ORTHO05D007080 7.3e-18 94.0 147 41.5
Lsat_1_v5_gn_8_56441 Lactuca sativa HOM05D005702 ORTHO05D007080 7.3e-18 94.0 147 41.5
CDE02G2156 Ceratophyllum demersum HOM05D005702 ORTHO05D007080 9.6e-18 93.6 147 40.8
PGSC0003DMG400026070 Solanum tuberosum HOM05D005702 ORTHO05D007080 9.6e-18 93.6 147 40.8
Nitab4.5_0001082g0090 Nicotiana tabacum HOM05D005702 ORTHO05D007080 1.3e-17 93.2 59 76.3
Solyc06g065230.3 Solanum lycopersicum HOM05D005702 ORTHO05D007080 1.3e-17 93.2 147 40.1
Sopen06g023720 Solanum pennellii HOM05D005702 ORTHO05D007080 1.3e-17 93.2 147 40.1
Lalb_Chr02g0142721 Lupinus albus HOM05D005702 ORTHO05D007080 1.6e-17 92.8 145 42.8
Haze_04696 Corylus avellana HOM05D005702 ORTHO05D007080 2.1e-17 92.4 145 42.1
SEGI_22390 Sequoiadendron giganteum HOM05D005702 ORTHO05D007080 2.1e-17 92.4 75 65.3
DCAR_012484 Daucus carota HOM05D005702 ORTHO05D007080 3.6e-17 91.7 147 40.8
AagrBONN_evm.TU.Sc2ySwM_228.2719 Anthoceros agrestis HOM05D005702 ORTHO05D007080 4.8e-17 91.3 59 74.6
Pp3c10_6780 Physcomitrium patens HOM05D005702 ORTHO05D007080 5.3e-16 87.8 59 72.9
AagrBONN_evm.TU.Sc2ySwM_368.1507 Anthoceros agrestis HOM05D005702 ORTHO05D007080 1.3e-14 83.2 63 65.1
SMO118G0064 Selaginella moellendorffii HOM05D005702 ORTHO05D007080 6.0e-12 74.3 55 61.8
CBR_g41307 Chara braunii HOM05D005702 ORTHO05D007080 1.0e-11 73.6 55 63.6
PRCOL_00006102 Prasinoderma coloniale HOM05D005702 ORTHO05D007080 8.7e-11 70.5 43 72.1
Sp1g02180 Schrenkiella parvula HOM05D005702 ORTHO05D007080 3.3e-10 68.6 129 37.2
Cre08.g383150 Chlamydomonas reinhardtii HOM05D005702 ORTHO05D007080 4.8e-09 64.7 55 54.5
Haze_26338 Corylus avellana HOM05D005702 ORTHO05D007080 7.6e-07 57.4 48 60.4
MBI01_g45394_MAGBIO Magnolia biondii HOM05D005702 ORTHO05D007080 7.6e-07 57.4 32 84.4
Atru.chr1.1080 Acer truncatum HOM05D005702 ORTHO05D007080 9.9e-07 57.0 80 45.0
VMungo1383G3274 Vigna mungo HOM05D005702 ORTHO05D007080 1.3e-06 56.6 31 87.1


User provided reference genes

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