Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p62040 Brassica napus HOM05D004904 ORTHO05D012458 2.5e-82 308.5 136 100.0
C07p62020 Brassica napus HOM05D004904 ORTHO05D012458 3.3e-74 281.6 136 92.6
C07p61990 Brassica napus HOM05D004904 ORTHO05D027820 4.0e-64 248.1 143 82.5
C07p62000 Brassica napus HOM05D004904 ORTHO05D027820 4.0e-64 248.1 143 82.5
BolC7t46619H Brassica oleracea HOM05D004904 ORTHO05D027820 4.0e-64 248.1 143 82.5
C07p62010 Brassica napus HOM05D004904 ORTHO05D027820 3.5e-60 235.0 137 81.8
BolC7t46620H Brassica oleracea HOM05D004904 ORTHO05D106633 9.9e-47 190.3 105 85.7
C08p44250 Brassica napus HOM05D004904 ORTHO05D012458 4.5e-31 138.3 137 51.1
BolC4t25152H Brassica oleracea HOM05D004904 ORTHO05D012458 8.4e-30 134.0 137 50.4
BraA09t41446Z Brassica rapa HOM05D004904 ORTHO05D012458 7.1e-29 131.0 137 46.7
BraA04t16123Z Brassica rapa HOM05D004904 ORTHO05D012458 1.2e-28 130.2 137 48.9
C08p44310 Brassica napus HOM05D004904 ORTHO05D012458 4.6e-28 128.3 137 51.8
BolC8t51974H Brassica oleracea HOM05D004904 ORTHO05D012458 4.6e-28 128.3 137 51.8
BraA09t41444Z Brassica rapa HOM05D004904 ORTHO05D012458 1.0e-27 127.1 137 47.4
BolC8t51971H Brassica oleracea HOM05D004904 ORTHO05D012458 5.1e-27 124.8 125 49.6
Carub.0001s4015 Capsella rubella HOM05D004904 ORTHO05D012458 9.7e-18 94.0 139 39.6
AL1G57680 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 1.2e-15 87.0 138 37.7
CARHR041320 Cardamine hirsuta HOM05D004904 ORTHO05D012458 1.5e-15 86.7 139 38.8
Carub.0001s4014 Capsella rubella HOM05D004904 ORTHO05D012458 2.0e-15 86.3 139 36.7
AT1G51250 Arabidopsis thaliana HOM05D004904 ORTHO05D012458 5.9e-15 84.7 139 36.7
CARHR220080 Cardamine hirsuta HOM05D004904 ORTHO05D012458 5.9e-15 84.7 139 36.0
AT1G51240 Arabidopsis thaliana HOM05D004904 ORTHO05D012458 2.2e-14 82.8 139 36.7
BolC6t38173H Brassica oleracea HOM05D004904 ORTHO05D012610 5.0e-14 81.6 149 37.6
A09p07740 Brassica napus HOM05D004904 ORTHO05D010762 1.4e-13 80.1 146 38.4
AL1G59040 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 2.7e-12 75.9 127 37.8
AL1G59050 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 2.7e-12 75.9 127 37.0
AL6G36930 Arabidopsis lyrata HOM05D004904 ORTHO05D010762 1.0e-11 73.9 127 37.8
BraA07t30372Z Brassica rapa HOM05D004904 ORTHO05D012610 1.4e-11 73.6 150 34.0
Thhalv10026501m.g Eutrema salsugineum HOM05D004904 ORTHO05D012458 5.1e-11 71.6 153 32.0
BolC2t09634H Brassica oleracea HOM05D011693 ORTHO05D017562 6.7e-11 71.2 145 33.1
CARHR112870 Cardamine hirsuta HOM05D004904 ORTHO05D010762 8.8e-11 70.9 144 33.3
C06p30060 Brassica napus HOM05D004904 ORTHO05D012610 1.1e-10 70.5 150 33.3
C06p30120 Brassica napus HOM05D004904 ORTHO05D012610 1.1e-10 70.5 137 36.5
BolC6t38167H Brassica oleracea HOM05D004904 ORTHO05D012610 1.1e-10 70.5 150 33.3
CARHR102040 Cardamine hirsuta HOM05D004904 ORTHO05D012610 1.1e-10 70.5 140 30.0
CARHR102030 Cardamine hirsuta HOM05D004904 ORTHO05D012610 2.0e-10 69.7 138 34.1
AT1G51230 Arabidopsis thaliana HOM05D004904 ORTHO05D012458 2.6e-10 69.3 127 34.6
A02p22560 Brassica napus HOM05D011693 ORTHO05D017562 2.6e-10 69.3 145 32.4
C02p36240 Brassica napus HOM05D011693 ORTHO05D017562 2.6e-10 69.3 145 31.7
BolC2t09637H Brassica oleracea HOM05D011693 ORTHO05D017562 2.6e-10 69.3 145 31.7
BraA02t07261Z Brassica rapa HOM05D011693 ORTHO05D017562 2.6e-10 69.3 145 32.4
A07p27280 Brassica napus HOM05D004904 ORTHO05D012610 5.7e-10 68.2 150 33.3
BolC2t12283H Brassica oleracea HOM05D004904 ORTHO05D010762 5.7e-10 68.2 138 31.9
BraA07t30371Z Brassica rapa HOM05D004904 ORTHO05D012610 5.7e-10 68.2 150 33.3
CARHR216070 Cardamine hirsuta HOM05D004904 ORTHO05D010762 7.4e-10 67.8 139 33.8
A02p42370 Brassica napus HOM05D004904 ORTHO05D010762 9.7e-10 67.4 138 31.9
C02p36200 Brassica napus HOM05D011693 ORTHO05D017562 9.7e-10 67.4 150 32.7
C09p08640 Brassica napus HOM05D004904 ORTHO05D010762 9.7e-10 67.4 142 34.5
BolC9t53775H Brassica oleracea HOM05D004904 ORTHO05D010762 9.7e-10 67.4 142 34.5
BraA02t09168Z Brassica rapa HOM05D004904 ORTHO05D010762 9.7e-10 67.4 138 31.9
A09p07720 Brassica napus HOM05D004904 ORTHO05D010762 1.3e-09 67.0 142 34.5
AL7G45630 Arabidopsis lyrata HOM05D002460 ORTHO05D002716 2.2e-09 66.2 127 33.9
C09p08630 Brassica napus HOM05D004904 ORTHO05D010762 2.2e-09 66.2 138 32.6
BolC9t53774H Brassica oleracea HOM05D004904 ORTHO05D010762 2.2e-09 66.2 138 32.6
BcaB06g25859 Brassica carinata HOM05D004904 ORTHO05D010762 3.7e-09 65.5 131 32.8
BraA09t36422Z Brassica rapa HOM05D004904 ORTHO05D010762 4.8e-09 65.1 142 33.8
Carub.0007s2927 Capsella rubella HOM05D004904 ORTHO05D010762 4.8e-09 65.1 138 35.5
C09p50630 Brassica napus HOM05D004904 ORTHO05D010762 6.3e-09 64.7 149 33.6
BolC9t57916H Brassica oleracea HOM05D004904 ORTHO05D010762 6.3e-09 64.7 149 33.6
Carub.0007s2940 Capsella rubella HOM05D004904 ORTHO05D010762 6.3e-09 64.7 130 34.6
Thhalv10002784m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 6.3e-09 64.7 142 35.2
Carub.0003s2589 Capsella rubella HOM05D004904 ORTHO05D012610 8.2e-09 64.3 139 33.1
CARHR216060 Cardamine hirsuta HOM05D004904 ORTHO05D010762 8.2e-09 64.3 138 34.1
Thhalv10029524m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 8.2e-09 64.3 140 35.0
Carub.0001s4013 Capsella rubella HOM05D004904 ORTHO05D012458 1.4e-08 63.5 145 31.7
CARHR057800 Cardamine hirsuta HOM05D004904 ORTHO05D010762 1.4e-08 63.5 146 32.9
Thhalv10000458m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 1.4e-08 63.5 144 35.4
AT2G04115 Arabidopsis thaliana HOM05D004904 ORTHO05D012610 1.8e-08 63.2 130 28.5
BcaC04g23408 Brassica carinata HOM05D004904 ORTHO05D010762 2.4e-08 62.8 131 33.6
BraA09t36421Z Brassica rapa HOM05D004904 ORTHO05D010762 2.4e-08 62.8 138 32.6
A07p27310 Brassica napus HOM05D004904 ORTHO05D012610 3.1e-08 62.4 138 32.6
A09p07710 Brassica napus HOM05D004904 ORTHO05D010762 3.1e-08 62.4 138 32.6
Thhalv10014983m.g Eutrema salsugineum HOM05D004904 ORTHO05D012993 3.1e-08 62.4 152 30.3
Thhalv10023047m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 3.1e-08 62.4 136 30.9
A02p22580 Brassica napus HOM05D011693 ORTHO05D017562 4.1e-08 62.0 145 30.3
BraA02t07262Z Brassica rapa HOM05D011693 ORTHO05D017562 4.1e-08 62.0 145 30.3
BcaC04g23406 Brassica carinata HOM05D004904 ORTHO05D010762 5.3e-08 61.6 142 32.4
A10p15680 Brassica napus HOM05D004904 ORTHO05D010762 5.3e-08 61.6 149 32.9
C08p49560 Brassica napus HOM05D004904 ORTHO05D015396 5.3e-08 61.6 149 31.5
BolC8t52492H Brassica oleracea HOM05D004904 ORTHO05D015396 5.3e-08 61.6 149 31.5
BraA10t43666Z Brassica rapa HOM05D004904 ORTHO05D010762 5.3e-08 61.6 149 32.9
AL3G46890 Arabidopsis lyrata HOM05D004904 ORTHO05D010762 7.0e-08 61.2 138 32.6
BolC9t53777H Brassica oleracea HOM05D004904 ORTHO05D010762 7.0e-08 61.2 142 32.4
A09p07760 Brassica napus HOM05D004904 ORTHO05D010762 9.1e-08 60.8 142 32.4
BraA09t36424Z Brassica rapa HOM05D004904 ORTHO05D010762 9.1e-08 60.8 142 32.4
Carub.0002s1683 Capsella rubella HOM05D004904 ORTHO05D012993 1.5e-07 60.1 128 32.8
CARHR216110 Cardamine hirsuta HOM05D004904 ORTHO05D010762 2.0e-07 59.7 138 32.6
AL2G29420 Arabidopsis lyrata HOM05D004904 ORTHO05D012993 3.4e-07 58.9 145 27.6
BcaC07g41901 Brassica carinata HOM05D004904 ORTHO05D015396 4.5e-07 58.5 149 30.9
BcaC07g41902 Brassica carinata HOM05D004904 ORTHO05D015396 4.5e-07 58.5 149 30.9
A02p22640 Brassica napus HOM05D011693 ORTHO05D040107 5.9e-07 58.2 149 32.9
BcaB05g25174 Brassica carinata HOM05D011693 ORTHO05D017562 1.7e-06 56.6 137 30.7
BraA09t41901Z Brassica rapa HOM05D004904 ORTHO05D015396 1.7e-06 56.6 147 31.3
BcaC08g45375 Brassica carinata HOM05D004904 ORTHO05D012610 2.2e-06 56.2 119 31.9
Thhalv10015293m.g Eutrema salsugineum HOM05D004904 ORTHO05D015396 2.2e-06 56.2 132 32.6
BcaC06g32139 Brassica carinata HOM05D003012 ORTHO05D002833 2.9e-06 55.8 138 25.4
BcaC06g32140 Brassica carinata HOM05D003012 ORTHO05D002833 8.5e-06 54.3 138 24.6
C09p08660 Brassica napus HOM05D004904 ORTHO05D010762 8.5e-06 54.3 139 30.9
CARHR102930 Cardamine hirsuta HOM05D004904 ORTHO05D012993 8.5e-06 54.3 143 28.7


User provided reference genes

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